FFCP PHASE1:Hg19::chr11:2156671..2156708,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5466|TSSclassifier=S|UniProt=P01344|association_with_transcript=44bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end|coexpression_cluster_id=C172|description=CAGE_peak_40_at_IGF2_5end|id=chr11:2156671..2156708,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.55e-20;19!CL:0000244;4.68e-09;4!CL:0000731;4.68e-09;4!CL:0000182;5.20e-09;12!CL:0002541;1.48e-08;3!CL:0002577;4.13e-08;3|ontology_enrichment_celltype_v019_2=CL:0000349,2.78e-20,19;CL:0000244,3.00e-09,4;CL:0000731,3.00e-09,4;CL:0000182,5.62e-09,12;CL:0002541,1.31e-08,3;CL:0002577,3.25e-08,3|ontology_enrichment_development_v019=UBERON:0004161;1.59e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!5.04e-13!14;UBERON:0000158!5.04e-13!14;UBERON:0000478!1.50e-09!24;UBERON:0004119!7.86e-09!169;UBERON:0000925!7.86e-09!169;UBERON:0006595!7.86e-09!169;UBERON:0000481!8.90e-09!347;UBERON:0003124!9.32e-09!7;UBERON:0000468!1.16e-07!659;UBERON:0005256!2.56e-07!143;UBERON:0004923!3.81e-07!57;UBERON:0003104!9.73e-07!238;UBERON:0009142!9.73e-07!238|ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-20;24!UBERON:0005631;5.70e-16;10!UBERON:0000158;5.70e-16;10!UBERON:0001987;2.31e-10;4!UBERON:0000305;1.62e-09;7!UBERON:0002107;8.98e-09;19!UBERON:0006925;8.98e-09;19!UBERON:0000922;1.28e-08;49!UBERON:0003124;1.48e-08;3!UBERON:0000920;1.48e-08;3!UBERON:0000365;3.02e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-24,14;UBERON:0000158,1.43e-24,14;UBERON:0000478,8.81e-21,24;UBERON:0003124,2.35e-17,7;UBERON:0001987,1.91e-10,4;UBERON:0004340,1.91e-10,4;UBERON:0000305,1.59e-09,7;UBERON:0004119,3.30e-09,160;UBERON:0000925,3.30e-09,160;UBERON:0006595,3.30e-09,160;UBERON:0002107,9.28e-09,19;UBERON:0006925,9.28e-09,19;UBERON:0008836,9.28e-09,19;UBERON:0000920,1.31e-08,3;UBERON:0004871,2.90e-08,8;UBERON:0000365,2.13e-07,5;UBERON:0008835,2.55e-07,22;UBERON:0003894,2.55e-07,22;UBERON:0009854,6.33e-07,23|phase1_expression=1.09007027562334,0,0,1.0007329835313,0,3.48935409640147,0,0,0,0,0,16.1646615376327,9.75937819445278,0.495065411840187,0.331397375727916,0,0,0,0,0,1.22400414746552,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0.404132016209064,0,3.17850598054356,6.33793516927999,0.468642863667593,0,0,0,0,0.161872944368132,0,0,0,0,0,1.23633464639278,0,0,0,0.125118519871964,0,0.877955241761676,0,0.751190294532984,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0.464775771478074,0.414644220061482,0.252320850875628,0,0,0,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,5.89696330006576,1.18157981336281,0,3.68965315629341,0,0,0,0,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,18.4491345833091,2.46972101034231,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,0.500170521059677,0.813795071099207,0.831883446123229,0.535286966391485,0.788512075169673,2.10854546986884,0,4.5481500811197,0,0,0,0,19.7759169037368,36.3732029239507,0,0,0,1.81876542867756,18.3078983461547,14.8171243731543,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0,7.6141453242722,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.524497659837696,0,0.231046011313244,0,0,0,0,0,0.431831832204279,3.08454505380579,0.812839312631559,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,1.23649213977267,0.0915694648183434,0,0,0,0,0.386682873168488,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,5.34192213880424,0.330569830721956,0.192190067365106,0,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,1.86079184679834,0.632758849437452,0.38126038784765,0.255897791311334,2.56763392820352,0,0,0.719489830333259,0,0.235624804691373,0,0,0,1.95053495635836,0,0,0.682499557039929,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,1.03558180854457,1.72202149068492,1.68471475667626,2.66058092122005,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,22.9194705348182,13.3634106374687,33.4805165288163,0,0,0,0,0.422250816255987,0.5977439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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt=P01344 | |||
|association_with_transcript=44bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_40_at_IGF2_5end | |||
|id=chr11:2156671..2156708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.55e-20;19!CL:0000244;4.68e-09;4!CL:0000731;4.68e-09;4!CL:0000182;5.20e-09;12!CL:0002541;1.48e-08;3!CL:0002577;4.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.78e-20,19;CL:0000244,3.00e-09,4;CL:0000731,3.00e-09,4;CL:0000182,5.62e-09,12;CL:0002541,1.31e-08,3;CL:0002577,3.25e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.59e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.04e-13!14;UBERON:0000158!5.04e-13!14;UBERON:0000478!1.50e-09!24;UBERON:0004119!7.86e-09!169;UBERON:0000925!7.86e-09!169;UBERON:0006595!7.86e-09!169;UBERON:0000481!8.90e-09!347;UBERON:0003124!9.32e-09!7;UBERON:0000468!1.16e-07!659;UBERON:0005256!2.56e-07!143;UBERON:0004923!3.81e-07!57;UBERON:0003104!9.73e-07!238;UBERON:0009142!9.73e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.07e-20;24!UBERON:0005631;5.70e-16;10!UBERON:0000158;5.70e-16;10!UBERON:0001987;2.31e-10;4!UBERON:0000305;1.62e-09;7!UBERON:0002107;8.98e-09;19!UBERON:0006925;8.98e-09;19!UBERON:0000922;1.28e-08;49!UBERON:0003124;1.48e-08;3!UBERON:0000920;1.48e-08;3!UBERON:0000365;3.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-24,14;UBERON:0000158,1.43e-24,14;UBERON:0000478,8.81e-21,24;UBERON:0003124,2.35e-17,7;UBERON:0001987,1.91e-10,4;UBERON:0004340,1.91e-10,4;UBERON:0000305,1.59e-09,7;UBERON:0004119,3.30e-09,160;UBERON:0000925,3.30e-09,160;UBERON:0006595,3.30e-09,160;UBERON:0002107,9.28e-09,19;UBERON:0006925,9.28e-09,19;UBERON:0008836,9.28e-09,19;UBERON:0000920,1.31e-08,3;UBERON:0004871,2.90e-08,8;UBERON:0000365,2.13e-07,5;UBERON:0008835,2.55e-07,22;UBERON:0003894,2.55e-07,22;UBERON:0009854,6.33e-07,23 | |||
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| |||
|short_description=p40@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p40@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 44bp_to_AB528666, BT007013, CU674260, DQ892721, DQ895970_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.78e-20 | 19 |
transitional epithelial cell | 3.00e-09 | 4 |
urothelial cell | 3.00e-09 | 4 |
hepatocyte | 5.62e-09 | 12 |
chorionic membrane mesenchymal stem cell | 1.31e-08 | 3 |
placental epithelial cell | 3.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-24 | 14 |
membranous layer | 1.43e-24 | 14 |
extraembryonic structure | 8.81e-21 | 24 |
chorion | 2.35e-17 | 7 |
placenta | 1.91e-10 | 4 |
allantois | 1.91e-10 | 4 |
amnion | 1.59e-09 | 7 |
endoderm-derived structure | 3.30e-09 | 160 |
endoderm | 3.30e-09 | 160 |
presumptive endoderm | 3.30e-09 | 160 |
liver | 9.28e-09 | 19 |
digestive gland | 9.28e-09 | 19 |
liver bud | 9.28e-09 | 19 |
egg chorion | 1.31e-08 | 3 |
somatic layer of lateral plate mesoderm | 2.90e-08 | 8 |
urothelium | 2.13e-07 | 5 |
hepatic diverticulum | 2.55e-07 | 22 |
liver primordium | 2.55e-07 | 22 |
digestive tract diverticulum | 6.33e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.