FFCP PHASE1:Hg19::chr11:2159773..2159793,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5466|TSSclassifier=N|UniProt=P01344|association_with_transcript=410bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end|coexpression_cluster_id=C172|description=CAGE_peak_33_at_IGF2_5end|id=chr11:2159773..2159793,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.85e-15;19!CL:0002541;5.69e-07;3!CL:0002577;7.72e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,4.39e-15,19;CL:0002541,5.61e-07,3;CL:0002577,7.75e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.33e-17!115;UBERON:0005631!5.86e-14!14;UBERON:0000158!5.86e-14!14;UBERON:0000481!6.35e-12!347;UBERON:0000478!1.12e-10!24;UBERON:0004119!5.75e-09!169;UBERON:0000925!5.75e-09!169;UBERON:0006595!5.75e-09!169;UBERON:0000062!9.24e-09!511;UBERON:0002616!1.07e-08!59;UBERON:0000468!1.11e-08!659;UBERON:0003124!3.73e-08!7;UBERON:0000064!4.54e-08!219;UBERON:0000475!1.29e-07!365;UBERON:0000955!1.48e-07!69;UBERON:0006238!1.48e-07!69;UBERON:0000305!1.98e-07!7;UBERON:0003075!1.99e-07!86;UBERON:0007284!1.99e-07!86;UBERON:0000922!2.15e-07!612;UBERON:0001049!2.84e-07!57;UBERON:0005068!2.84e-07!57;UBERON:0006241!2.84e-07!57;UBERON:0007135!2.84e-07!57;UBERON:0005743!3.95e-07!86;UBERON:0001017!6.02e-07!82;UBERON:0002346!6.19e-07!90;UBERON:0004923!6.48e-07!57;UBERON:0001046!8.44e-07!19|ontology_enrichment_uberon_v019=UBERON:0000478;2.06e-15;24!UBERON:0005631;3.90e-15;10!UBERON:0000158;3.90e-15;10!UBERON:0000305;6.08e-10;7!UBERON:0001987;1.62e-08;4!UBERON:0000922;1.67e-08;49!UBERON:0005409;3.58e-08;22!UBERON:0000160;9.80e-08;17!UBERON:0003124;5.69e-07;3!UBERON:0000920;5.69e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.39e-22,14;UBERON:0000158,7.39e-22,14;UBERON:0000478,2.31e-15,24;UBERON:0003124,7.79e-14,7;UBERON:0000305,7.26e-10,7;UBERON:0001987,1.61e-08,4;UBERON:0004340,1.61e-08,4;UBERON:0004871,1.68e-08,8;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0000160,9.06e-08,17;UBERON:0000920,5.61e-07,3;UBERON:0005409,5.73e-07,25;UBERON:0001008,7.48e-07,48;UBERON:0004923,8.86e-07,66;UBERON:0004921,9.46e-07,118|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,0,0,2.61701557230111,0,0,0,0.491467873003018,0,6.55324116390517,7.12170841216825,0.74259811776028,0.662794751455832,0,0,0,0,0.861847406537515,3.26401105990805,3.44800193625897,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11900398702904,2.30470369792,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,4.75201142912821,3.4617370098998,0,0,0,0.250237039743928,0,0.877955241761676,0,0.751190294532984,0,0,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,1.18157981336281,0,8.97815601364729,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,2.61576041299968,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0.514414748524284,1.41849132023278,0.799266537048298,2.7165818795048,8.68194568626309,0.823240336780769,0,1.77695974371273,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,0,1.35632511849868,1.66376689224646,0.356857977594324,1.26161932027148,1.7571212248907,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,22.9087354231406,24.0200396667599,0,0,0,6.66880657181771,14.9791895559447,18.7481981864402,0,0.767309866440312,0,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,30.2148623979056,0.802025881213139,0,0.34444334449382,0.364182336013434,1.04899531967539,0.902399225814824,0.308061348417659,0,1.46139224653261,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0.325378394664303,3.60643540767028,0,0.165018999841176,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0.580066775656914,0.255679882248303,4.45160178233687,0.661139661443912,0.768760269460425,0,0.708104465988849,0,0,0,0,0,0,0,0,0.372158369359667,2.84741482246853,1.33441135746677,0,0.42793898803392,0,0,1.2591072030832,1.09814811894422,0.117812402345686,0,0,0,0.975267478179181,0,0,2.45699840534374,0.282810863907425,0,0,0,0,0,0,0,0,0,0.717056761020258,1.08073945114433,0,0,0,0,0,0,0,1.34060455107157,0,4.61304623806218,3.87454835404107,0,1.7737206141467,1.60806380144872,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=N | |||
|UniProt=P01344 | |||
|association_with_transcript=410bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_33_at_IGF2_5end | |||
|id=chr11:2159773..2159793,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.85e-15;19!CL:0002541;5.69e-07;3!CL:0002577;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.39e-15,19;CL:0002541,5.61e-07,3;CL:0002577,7.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.33e-17!115;UBERON:0005631!5.86e-14!14;UBERON:0000158!5.86e-14!14;UBERON:0000481!6.35e-12!347;UBERON:0000478!1.12e-10!24;UBERON:0004119!5.75e-09!169;UBERON:0000925!5.75e-09!169;UBERON:0006595!5.75e-09!169;UBERON:0000062!9.24e-09!511;UBERON:0002616!1.07e-08!59;UBERON:0000468!1.11e-08!659;UBERON:0003124!3.73e-08!7;UBERON:0000064!4.54e-08!219;UBERON:0000475!1.29e-07!365;UBERON:0000955!1.48e-07!69;UBERON:0006238!1.48e-07!69;UBERON:0000305!1.98e-07!7;UBERON:0003075!1.99e-07!86;UBERON:0007284!1.99e-07!86;UBERON:0000922!2.15e-07!612;UBERON:0001049!2.84e-07!57;UBERON:0005068!2.84e-07!57;UBERON:0006241!2.84e-07!57;UBERON:0007135!2.84e-07!57;UBERON:0005743!3.95e-07!86;UBERON:0001017!6.02e-07!82;UBERON:0002346!6.19e-07!90;UBERON:0004923!6.48e-07!57;UBERON:0001046!8.44e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.06e-15;24!UBERON:0005631;3.90e-15;10!UBERON:0000158;3.90e-15;10!UBERON:0000305;6.08e-10;7!UBERON:0001987;1.62e-08;4!UBERON:0000922;1.67e-08;49!UBERON:0005409;3.58e-08;22!UBERON:0000160;9.80e-08;17!UBERON:0003124;5.69e-07;3!UBERON:0000920;5.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.39e-22,14;UBERON:0000158,7.39e-22,14;UBERON:0000478,2.31e-15,24;UBERON:0003124,7.79e-14,7;UBERON:0000305,7.26e-10,7;UBERON:0001987,1.61e-08,4;UBERON:0004340,1.61e-08,4;UBERON:0004871,1.68e-08,8;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0000160,9.06e-08,17;UBERON:0000920,5.61e-07,3;UBERON:0005409,5.73e-07,25;UBERON:0001008,7.48e-07,48;UBERON:0004923,8.86e-07,66;UBERON:0004921,9.46e-07,118 | |||
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| |||
|short_description=p33@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p33@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 410bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.39e-15 | 19 |
chorionic membrane mesenchymal stem cell | 5.61e-07 | 3 |
placental epithelial cell | 7.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.39e-22 | 14 |
membranous layer | 7.39e-22 | 14 |
extraembryonic structure | 2.31e-15 | 24 |
chorion | 7.79e-14 | 7 |
amnion | 7.26e-10 | 7 |
placenta | 1.61e-08 | 4 |
allantois | 1.61e-08 | 4 |
somatic layer of lateral plate mesoderm | 1.68e-08 | 8 |
endoderm-derived structure | 3.60e-08 | 160 |
endoderm | 3.60e-08 | 160 |
presumptive endoderm | 3.60e-08 | 160 |
intestine | 9.06e-08 | 17 |
egg chorion | 5.61e-07 | 3 |
gastrointestinal system | 5.73e-07 | 25 |
renal system | 7.48e-07 | 48 |
organ component layer | 8.86e-07 | 66 |
subdivision of digestive tract | 9.46e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.