FFCP PHASE1:Hg19::chr11:27723059..27723067,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=627|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1033|TSSclassifier=S|UniProt=P23560|association_with_transcript=112bp_to_ENST00000395980,NM_170733,uc001mrv.2_5end|coexpression_cluster_id=C1630|description=CAGE_peak_11_at_BDNF_5end|id=chr11:27723059..27723067,-|ontology_enrichment_celltype=CL:0000055!3.59e-11!180;CL:0000057!1.11e-09!75;CL:1000306!1.78e-09!4;CL:0002547!1.78e-09!4;CL:0000192!1.72e-07!42;CL:0000514!1.72e-07!42|ontology_enrichment_celltype_v019=CL:0002595;2.85e-30;5!CL:0002593;1.33e-09;2!CL:0000359;1.80e-08;32!CL:0000346;8.14e-07;3!CL:1000428;8.14e-07;3!CL:0000632;8.14e-07;3|ontology_enrichment_celltype_v019_2=CL:0002595,2.86e-30,5;CL:0002593,1.71e-09,2;CL:0000359,1.23e-08,32;CL:0000632,7.70e-07,3;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4235;7.36e-18;1!DOID:3571;7.36e-18;1!DOID:3350;1.33e-09;2!DOID:3307;1.33e-09;2|ontology_enrichment_disease_v019_2=DOID:4235,4.44e-18,1;DOID:3571,6.23e-18,1;DOID:3307,9.46e-10,2;DOID:3350,1.22e-09,2|ontology_enrichment_uberon=UBERON:0000415!1.78e-09!4;UBERON:0007240!1.78e-09!4;UBERON:0005742!1.78e-09!4;UBERON:0005734!1.78e-09!4;UBERON:0004664!1.78e-09!4;UBERON:0004663!1.78e-09!4|ontology_enrichment_uberon_v019=UBERON:0003834;2.85e-30;5!UBERON:0001533;2.85e-30;5!UBERON:0003513;7.56e-22;7!UBERON:0002456;1.33e-09;2!UBERON:0004573;9.49e-08;33!UBERON:0004571;9.49e-08;33!UBERON:0000412;8.14e-07;3!UBERON:0001992;8.14e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.86e-30,5;UBERON:0001533,2.86e-30,5;UBERON:0003513,7.57e-22,7;UBERON:0002456,1.71e-09,2;UBERON:0004573,2.21e-08,33;UBERON:0004571,2.21e-08,33;UBERON:0000412,8.62e-07,3;UBERON:0001992,8.62e-07,3|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.926864265692532,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.612975591598039,1.80285670687916,0,0.717558542755448,0,0,0.300091096084402,0,1.03056216018252,0,0.675105328965065,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,8.81474571125792,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0,0.565621727814851,0,0,1.99031692572366,1.31535265576129,0,0,0.405820753925408,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.896436696664224,0,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0.71635536432595,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1033 | |||
|TSSclassifier=S | |||
|UniProt=P23560 | |||
|association_with_transcript=112bp_to_ENST00000395980,NM_170733,uc001mrv.2_5end | |||
|coexpression_cluster_id=C1630 | |||
|description=CAGE_peak_11_at_BDNF_5end | |||
|id=chr11:27723059..27723067,- | |||
|ontology_enrichment_celltype=CL:0000055!3.59e-11!180;CL:0000057!1.11e-09!75;CL:1000306!1.78e-09!4;CL:0002547!1.78e-09!4;CL:0000192!1.72e-07!42;CL:0000514!1.72e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002595;2.85e-30;5!CL:0002593;1.33e-09;2!CL:0000359;1.80e-08;32!CL:0000346;8.14e-07;3!CL:1000428;8.14e-07;3!CL:0000632;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.86e-30,5;CL:0002593,1.71e-09,2;CL:0000359,1.23e-08,32;CL:0000632,7.70e-07,3;CL:0000346,8.62e-07,3;CL:1000428,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;7.36e-18;1!DOID:3571;7.36e-18;1!DOID:3350;1.33e-09;2!DOID:3307;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,4.44e-18,1;DOID:3571,6.23e-18,1;DOID:3307,9.46e-10,2;DOID:3350,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000415!1.78e-09!4;UBERON:0007240!1.78e-09!4;UBERON:0005742!1.78e-09!4;UBERON:0005734!1.78e-09!4;UBERON:0004664!1.78e-09!4;UBERON:0004663!1.78e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.85e-30;5!UBERON:0001533;2.85e-30;5!UBERON:0003513;7.56e-22;7!UBERON:0002456;1.33e-09;2!UBERON:0004573;9.49e-08;33!UBERON:0004571;9.49e-08;33!UBERON:0000412;8.14e-07;3!UBERON:0001992;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.86e-30,5;UBERON:0001533,2.86e-30,5;UBERON:0003513,7.57e-22,7;UBERON:0002456,1.71e-09,2;UBERON:0004573,2.21e-08,33;UBERON:0004571,2.21e-08,33;UBERON:0000412,8.62e-07,3;UBERON:0001992,8.62e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.926864265692532,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.612975591598039,1.80285670687916,0,0.717558542755448,0,0,0.300091096084402,0,1.03056216018252,0,0.675105328965065,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,8.81474571125792,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0,0.565621727814851,0,0,1.99031692572366,1.31535265576129,0,0,0.405820753925408,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.896436696664224,0,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0.71635536432595,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p11@BDNF | |||
}} |
Revision as of 17:21, 10 September 2013
Short description: | p11@BDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_BDNF_5end |
Coexpression cluster: | C1630_Smooth_Fibroblast_mesenchymal_Chondrocyte_Nucleus_Anulus_Preadipocyte |
Association with transcript: | 112bp_to_ENST00000395980, NM_170733, uc001mrv.2_5end |
EntrezGene: | BDNF |
HGNC: | 1033 |
UniProt: | P23560 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.86e-30 | 5 |
smooth muscle cell of the internal thoracic artery | 1.71e-09 | 2 |
vascular associated smooth muscle cell | 1.23e-08 | 32 |
hepatic stellate cell | 7.70e-07 | 3 |
hair follicle dermal papilla cell | 8.62e-07 | 3 |
stem cell of epidermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.86e-30 | 5 |
subclavian artery | 2.86e-30 | 5 |
trunk blood vessel | 7.57e-22 | 7 |
internal thoracic artery | 1.71e-09 | 2 |
systemic artery | 2.21e-08 | 33 |
systemic arterial system | 2.21e-08 | 33 |
dermal papilla | 8.62e-07 | 3 |
papillary layer of dermis | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 4.44e-18 | 1 |
liver cancer | 6.23e-18 | 1 |
teratoma | 9.46e-10 | 2 |
mesenchymal cell neoplasm | 1.22e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.