FFCP PHASE1:Hg19::chr11:3818932..3819007,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4928|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8068|TSSclassifier=S|UniProt=P52948|association_with_transcript=14bp_to_ENST00000324932,ENST00000359171,NM_005387,NM_016320,NM_139131,NM_139132_5end|coexpression_cluster_id=C1|description=CAGE_peak_2_at_NUP98_5end|id=chr11:3818932..3819007,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;1.22e-09;2!CL:0000558;1.22e-09;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.34e-09,2;CL:0000765,1.34e-09,2;CL:0000050,1.34e-09,2;CL:0000038,1.34e-09,2;CL:0000558,1.34e-09,2;CL:0000547,1.34e-09,2;CL:0000549,1.34e-09,2;CL:0000550,1.34e-09,2;CL:0000552,1.34e-09,2|ontology_enrichment_development_v019=UBERON:0008947;5.84e-14;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;2.30e-13;8|ontology_enrichment_disease_v019_2=DOID:1036,1.66e-13,8|ontology_enrichment_uberon=UBERON:0007023!2.42e-11!115;UBERON:0003075!7.79e-08!86;UBERON:0007284!7.79e-08!86;UBERON:0001737!1.44e-07!9;UBERON:0005743!4.33e-07!86;UBERON:0002346!4.34e-07!90;UBERON:0001049!5.40e-07!57;UBERON:0005068!5.40e-07!57;UBERON:0006241!5.40e-07!57;UBERON:0007135!5.40e-07!57|ontology_enrichment_uberon_v019=UBERON:0001737;3.54e-32;9!UBERON:0001557;3.54e-32;9!UBERON:0000065;1.84e-08;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.58e-32,9;UBERON:0001557,1.37e-14,19;UBERON:0008947,3.61e-10,38;UBERON:0003258,3.61e-10,38|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.85870796139317,0.273748850145768,0.627713197974014,0.229240217243854,0.821005894499457,0.236132343941038,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.46480320348181,0.426507697462265,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.689491361473237,0,1.35426486594342,0.376484679085209,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0.167186495390678,0.32592226663359,0.946895611469467,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.25618263945135,0,0.328875809207352,0,0,0.14828656316206,0.535081656179426,2.09071047609954,0.113309342697566,0,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,0,0.534880391567015,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.850813354476611,0.221729397462564,0.175669571386252,28.4224593830036,0,0.741568885568859,0,0.174129737299267,0,0,0.571994910780128,0,0.596287222100115,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.535798369704479,0.22452937262617,0.225222960966644,1.53316637465883,0,0.549605231791222,1.31780417436063,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0.149448680551801,1.05691048779388,0.647491777472526,0.702254033511242,0.61246251376468,0,0.309977343527296,0,0.494533858557114,0,0,0.841680569770331,0.375355559615893,0.277064115484183,0.438977620880838,0,0,0.340296549480063,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0.252433774244115,0,0,0,0.403008392910561,0.339121184620975,0,0,0.286804595389004,0,0,0.580969714347592,0.310983165046111,0.756962552626885,0.36497735907583,0,0,0,0,0,3.07597680103594,3.54027849164014,3.37415441836875,2.42646740011267,1.52515610864684,0.474541238222193,3.10112008768378,2.74710051175484,3.46272441251751,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.268675568108545,0.871901815541886,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.444485260045183,0,0,0,0.514137463516618,0.300343057843917,0,0.448524337381443,0.87192013766656,0.51336800074665,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,1.54657762555539,0.167516265334349,0,1.49801404789436,0,0,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0.348631135379878,0.483437798366489,0.200506470303285,0.184161977871793,0.34444334449382,0,0,0,0.462092022626489,0,0,0,0,0.680374821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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8068 | |||
|TSSclassifier=S | |||
|UniProt=P52948 | |||
|association_with_transcript=14bp_to_ENST00000324932,ENST00000359171,NM_005387,NM_016320,NM_139131,NM_139132_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_NUP98_5end | |||
|id=chr11:3818932..3819007,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.22e-09;2!CL:0000558;1.22e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.34e-09,2;CL:0000765,1.34e-09,2;CL:0000050,1.34e-09,2;CL:0000038,1.34e-09,2;CL:0000558,1.34e-09,2;CL:0000547,1.34e-09,2;CL:0000549,1.34e-09,2;CL:0000550,1.34e-09,2;CL:0000552,1.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.84e-14;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;2.30e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.66e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-11!115;UBERON:0003075!7.79e-08!86;UBERON:0007284!7.79e-08!86;UBERON:0001737!1.44e-07!9;UBERON:0005743!4.33e-07!86;UBERON:0002346!4.34e-07!90;UBERON:0001049!5.40e-07!57;UBERON:0005068!5.40e-07!57;UBERON:0006241!5.40e-07!57;UBERON:0007135!5.40e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.54e-32;9!UBERON:0001557;3.54e-32;9!UBERON:0000065;1.84e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.58e-32,9;UBERON:0001557,1.37e-14,19;UBERON:0008947,3.61e-10,38;UBERON:0003258,3.61e-10,38 | |||
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| |||
|short_description=p2@NUP98 | |||
}} |
Revision as of 17:44, 10 September 2013
Short description: | p2@NUP98 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NUP98_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 14bp_to_ENST00000324932, ENST00000359171, NM_005387, NM_016320, NM_139131, NM_139132_5end |
EntrezGene: | NUP98 |
HGNC: | 8068 |
UniProt: | P52948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.34e-09 | 2 |
erythroblast | 1.34e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 1.34e-09 | 2 |
erythroid progenitor cell | 1.34e-09 | 2 |
reticulocyte | 1.34e-09 | 2 |
proerythroblast | 1.34e-09 | 2 |
basophilic erythroblast | 1.34e-09 | 2 |
polychromatophilic erythroblast | 1.34e-09 | 2 |
orthochromatic erythroblast | 1.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.58e-32 | 9 |
upper respiratory tract | 1.37e-14 | 19 |
respiratory primordium | 3.61e-10 | 38 |
endoderm of foregut | 3.61e-10 | 38 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.66e-13 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.