FFCP PHASE1:Hg19::chr11:71955210..71955227,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=401|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=691|TSSclassifier=S|UniProt=O14813|association_with_transcript=0bp_to_ENST00000298231,NM_005169,uc001osh.3_5end|coexpression_cluster_id=C135|description=CAGE_peak_1_at_PHOX2A_5end|id=chr11:71955210..71955227,-|ontology_enrichment_celltype=CL:0002322!1.93e-11!5|ontology_enrichment_celltype_v019=CL:0000333;1.52e-18;5!CL:0002321;3.09e-17;15!CL:0002322;3.74e-10;5!CL:0000148;1.15e-08;10|ontology_enrichment_celltype_v019_2=CL:0002322,4.53e-10,5;CL:0000333,7.08e-09,41;CL:0000148,1.21e-08,10;CL:0000541,1.21e-08,10;CL:0000133,3.57e-07,59|ontology_enrichment_development_v019=UBERON:0001045;6.06e-07;1!UBERON:0000358;8.27e-07;1|ontology_enrichment_disease=DOID:3095!3.67e-10!22;DOID:2994!3.67e-10!22;DOID:169!6.99e-07!6|ontology_enrichment_disease_v019=DOID:169;1.77e-15;6!DOID:3095;1.82e-11;22!DOID:2994;1.82e-11;22!DOID:171;2.53e-09;10|ontology_enrichment_disease_v019_2=DOID:169,1.88e-15,6;DOID:3095,1.51e-11,22;DOID:2994,1.51e-11,22;DOID:171,2.62e-09,10|ontology_enrichment_uberon=UBERON:0007023!9.31e-13!115;UBERON:0003076!2.94e-10!15;UBERON:0003057!2.94e-10!15;UBERON:0002298!2.11e-09!8;UBERON:0000473!2.91e-09!8;UBERON:0000013!2.66e-08!5;UBERON:0002410!2.66e-08!5;UBERON:0001896!2.72e-07!3;UBERON:0005290!2.72e-07!3;UBERON:0010096!2.72e-07!3;UBERON:0002240!2.90e-07!3;UBERON:0000988!3.51e-07!3|ontology_enrichment_uberon_v019=UBERON:0000160;1.22e-18;17!UBERON:0000013;1.52e-18;5!UBERON:0002410;1.52e-18;5!UBERON:0005409;3.81e-18;22!UBERON:0000059;1.38e-12;11!UBERON:0004921;4.48e-11;33!UBERON:0002108;1.47e-10;4!UBERON:0000010;2.37e-10;8!UBERON:0001155;4.52e-10;9!UBERON:0000922;8.34e-09;49!UBERON:0001154;6.06e-07;1!UBERON:0001153;6.06e-07;1!UBERON:0009854;6.06e-07;1!UBERON:0005795;6.98e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-18,17;UBERON:0000013,1.63e-18,5;UBERON:0002410,1.63e-18,5;UBERON:0005409,6.82e-16,25;UBERON:0000059,1.20e-12,11;UBERON:0002108,1.62e-10,4;UBERON:0000010,2.46e-10,8;UBERON:0001155,3.97e-10,9;UBERON:0001154,6.24e-07,1;UBERON:0001153,6.24e-07,1;UBERON:0001045,6.24e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.795178609928912,1.2781333715647,2.17688215532278,1.51392510525377,8.39447925874409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,5.52567831062295,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,2.82483166997221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,1.76915129006678,7.33236173920351,0,0,0,0.337005664903385,0,0,0,0,0,0,4.83962864194656,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.964518890790115,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.646414781807753,6.21493228190643,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,1.92498849118289,8.43926673111008,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,253.742432666445,496.425431670323,1.41539347670307,988.56564491411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0.470958557103084,0,0,50.2237296280223,0,0,1.07214816264985,0,0,0.173858272302579,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0.83244063544298,0,7.80577668892547,0,1.389134845943,8.08670373864642,0,0,0,1.17785080268967,0.5940928006541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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=401 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=691 | |||
|TSSclassifier=S | |||
|UniProt=O14813 | |||
|association_with_transcript=0bp_to_ENST00000298231,NM_005169,uc001osh.3_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_1_at_PHOX2A_5end | |||
|id=chr11:71955210..71955227,- | |||
|ontology_enrichment_celltype=CL:0002322!1.93e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.52e-18;5!CL:0002321;3.09e-17;15!CL:0002322;3.74e-10;5!CL:0000148;1.15e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.53e-10,5;CL:0000333,7.08e-09,41;CL:0000148,1.21e-08,10;CL:0000541,1.21e-08,10;CL:0000133,3.57e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.06e-07;1!UBERON:0000358;8.27e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!3.67e-10!22;DOID:2994!3.67e-10!22;DOID:169!6.99e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.77e-15;6!DOID:3095;1.82e-11;22!DOID:2994;1.82e-11;22!DOID:171;2.53e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.88e-15,6;DOID:3095,1.51e-11,22;DOID:2994,1.51e-11,22;DOID:171,2.62e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.31e-13!115;UBERON:0003076!2.94e-10!15;UBERON:0003057!2.94e-10!15;UBERON:0002298!2.11e-09!8;UBERON:0000473!2.91e-09!8;UBERON:0000013!2.66e-08!5;UBERON:0002410!2.66e-08!5;UBERON:0001896!2.72e-07!3;UBERON:0005290!2.72e-07!3;UBERON:0010096!2.72e-07!3;UBERON:0002240!2.90e-07!3;UBERON:0000988!3.51e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.22e-18;17!UBERON:0000013;1.52e-18;5!UBERON:0002410;1.52e-18;5!UBERON:0005409;3.81e-18;22!UBERON:0000059;1.38e-12;11!UBERON:0004921;4.48e-11;33!UBERON:0002108;1.47e-10;4!UBERON:0000010;2.37e-10;8!UBERON:0001155;4.52e-10;9!UBERON:0000922;8.34e-09;49!UBERON:0001154;6.06e-07;1!UBERON:0001153;6.06e-07;1!UBERON:0009854;6.06e-07;1!UBERON:0005795;6.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-18,17;UBERON:0000013,1.63e-18,5;UBERON:0002410,1.63e-18,5;UBERON:0005409,6.82e-16,25;UBERON:0000059,1.20e-12,11;UBERON:0002108,1.62e-10,4;UBERON:0000010,2.46e-10,8;UBERON:0001155,3.97e-10,9;UBERON:0001154,6.24e-07,1;UBERON:0001153,6.24e-07,1;UBERON:0001045,6.24e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.795178609928912,1.2781333715647,2.17688215532278,1.51392510525377,8.39447925874409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,5.52567831062295,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,2.82483166997221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,1.76915129006678,7.33236173920351,0,0,0,0.337005664903385,0,0,0,0,0,0,4.83962864194656,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.964518890790115,0.412618309791701,0.415440338029185,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.646414781807753,6.21493228190643,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,1.92498849118289,8.43926673111008,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,253.742432666445,496.425431670323,1.41539347670307,988.56564491411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0.470958557103084,0,0,50.2237296280223,0,0,1.07214816264985,0,0,0.173858272302579,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0.83244063544298,0,7.80577668892547,0,1.389134845943,8.08670373864642,0,0,0,1.17785080268967,0.594092800654172,0.8453114551668,0,0.187967835959707,0.128915775947154,0,0,0,0,6.57302749421866,0.458729283404541,0,0,0,0,5.81929524566941,0,0,0,0,1.74824915141913,1.90047751517155,0.509944148709909,0.26721740526556,0,0.250707539292375,0.606229585745915,2.67964130156179,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,2.32862249582209,0,0,0,0,2.34640942403454,0.122241444182866,3.25516942652591,0,1.61019034872821,0 | |||
|short_description=p1@PHOX2A | |||
}} |
Revision as of 19:30, 10 September 2013
Short description: | p1@PHOX2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PHOX2A_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_ENST00000298231, NM_005169, uc001osh.3_5end |
EntrezGene: | PHOX2A |
HGNC: | 691 |
UniProt: | O14813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.53e-10 | 5 |
migratory neural crest cell | 7.08e-09 | 41 |
melanocyte | 1.21e-08 | 10 |
melanoblast | 1.21e-08 | 10 |
neurectodermal cell | 3.57e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.16e-18 | 17 |
sympathetic nervous system | 1.63e-18 | 5 |
autonomic nervous system | 1.63e-18 | 5 |
gastrointestinal system | 6.82e-16 | 25 |
large intestine | 1.20e-12 | 11 |
small intestine | 1.62e-10 | 4 |
peripheral nervous system | 2.46e-10 | 8 |
colon | 3.97e-10 | 9 |
vermiform appendix | 6.24e-07 | 1 |
caecum | 6.24e-07 | 1 |
midgut | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.88e-15 | 6 |
germ cell and embryonal cancer | 1.51e-11 | 22 |
germ cell cancer | 1.51e-11 | 22 |
neuroectodermal tumor | 2.62e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.