FFCP PHASE1:Hg19::chr11:75719740..75719766,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C391|description=CAGE_peak_at_chr11:75719740..75719766,+|id=chr11:75719740..75719766,+|ontology_enrichment_celltype=CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3;CL:0002582!2.14e-07!3|ontology_enrichment_celltype_v019=CL:0000064;2.22e-23;3!CL:0000067;2.22e-23;3!CL:0005012;2.22e-23;3!CL:0002304;2.22e-23;3!CL:0002568;9.48e-18;1!CL:0002549;1.51e-09;2!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0000515;8.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0000064,2.10e-23,3;CL:0000067,2.10e-23,3;CL:0005012,2.10e-23,3;CL:0002304,2.10e-23,3;CL:0002568,7.37e-18,1;CL:0002549,1.86e-09,2;CL:0000346,9.64e-07,3;CL:1000428,9.64e-07,3|ontology_enrichment_development_v019=UBERON:0009847;8.86e-07;3!UBERON:0003353;8.86e-07;3|ontology_enrichment_disease=DOID:2394!1.75e-14!14|ontology_enrichment_disease_v019=DOID:4556;5.80e-07;3|ontology_enrichment_disease_v019_2=DOID:4556,5.80e-07,3|ontology_enrichment_uberon=UBERON:0000488!6.13e-10!4;UBERON:0001778!2.41e-08!3;UBERON:0001775!2.41e-08!3;UBERON:0000992!6.23e-08!13;UBERON:0002118!1.37e-07!5;UBERON:0004532!1.37e-07!5;UBERON:0002200!2.91e-07!11;UBERON:0006876!2.91e-07!11|ontology_enrichment_uberon_v019=UBERON:0001778;2.22e-23;3!UBERON:0001775;2.22e-23;3!UBERON:0000488;8.38e-18;4!UBERON:0007625;2.69e-14;11!UBERON:0006876;2.69e-14;11!UBERON:0002203;3.35e-12;6!UBERON:0001768;3.35e-12;6!UBERON:0002200;3.35e-12;6!UBERON:0001801;2.28e-11;14!UBERON:0005629;1.51e-09;2!UBERON:0005358;1.51e-09;2!UBERON:0001886;1.51e-09;2!UBERON:0004086;1.51e-09;2!UBERON:0005282;1.51e-09;2!UBERON:0005281;1.51e-09;2!UBERON:0010371;7.95e-09;31!UBERON:0000019;1.57e-08;19!UBERON:0000047;1.57e-08;19!UBERON:0004088;1.57e-08;19!UBERON:0010230;1.57e-08;19!UBERON:0002067;2.96e-08;9!UBERON:0000970;3.95e-08;20!UBERON:0002104;9.08e-08;21!UBERON:0001456;9.08e-08;21!UBERON:0000020;3.87e-07;23!UBERON:0001032;7.31e-07;24!UBERON:0004456;7.31e-07;24!UBERON:0000412;8.86e-07;3!UBERON:0001992;8.86e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.10e-23,3;UBERON:0001775,2.10e-23,3;UBERON:0000488,8.04e-18,4;UBERON:0007625,2.69e-14,11;UBERON:0006876,2.95e-14,11;UBERON:0002203,3.26e-12,6;UBERON:0001768,3.26e-12,6;UBERON:0002200,3.26e-12,6;UBERON:0001801,2.28e-11,14;UBERON:0005629,1.86e-09,2;UBERON:0005358,1.86e-09,2;UBERON:0001886,1.86e-09,2;UBERON:0004086,1.86e-09,2;UBERON:0005282,1.86e-09,2;UBERON:0005281,1.86e-09,2;UBERON:0005085,6.88e-09,31;UBERON:0002067,2.75e-08,9;UBERON:0004016,2.75e-08,9;UBERON:0010083,2.75e-08,9;UBERON:0000019,3.95e-08,20;UBERON:0000047,3.95e-08,20;UBERON:0010312,3.95e-08,20;UBERON:0004088,3.95e-08,20;UBERON:0010230,3.95e-08,20;UBERON:0003072,3.95e-08,20;UBERON:0004128,3.95e-08,20;UBERON:0003071,3.95e-08,20;UBERON:0000970,9.08e-08,21;UBERON:0002104,9.08e-08,21;UBERON:0001456,1.94e-07,22;UBERON:0000020,7.32e-07,24;UBERON:0001032,7.32e-07,24;UBERON:0004456,7.32e-07,24;UBERON:0000412,9.64e-07,3;UBERON:0001992,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.61560529038394,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,2.4390233720882,3.07421749925941,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.49333509683432,0,0,0.163461903113459,0.454072282934794,1.15235184896,0,0,0,0,0.23486899728753,0.971237666208789,1.68540968042698,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,1.55126058909333,0,0,0,0,0,0,0.532844358032199,0,0,0,1.62868092146868,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.464841513839837,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0.808729926293264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr11:75719740..75719766,+ | |||
|id=chr11:75719740..75719766,+ | |||
|ontology_enrichment_celltype=CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3;CL:0002582!2.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.22e-23;3!CL:0000067;2.22e-23;3!CL:0005012;2.22e-23;3!CL:0002304;2.22e-23;3!CL:0002568;9.48e-18;1!CL:0002549;1.51e-09;2!CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0000515;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.10e-23,3;CL:0000067,2.10e-23,3;CL:0005012,2.10e-23,3;CL:0002304,2.10e-23,3;CL:0002568,7.37e-18,1;CL:0002549,1.86e-09,2;CL:0000346,9.64e-07,3;CL:1000428,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;8.86e-07;3!UBERON:0003353;8.86e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!1.75e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;5.80e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,5.80e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000488!6.13e-10!4;UBERON:0001778!2.41e-08!3;UBERON:0001775!2.41e-08!3;UBERON:0000992!6.23e-08!13;UBERON:0002118!1.37e-07!5;UBERON:0004532!1.37e-07!5;UBERON:0002200!2.91e-07!11;UBERON:0006876!2.91e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;2.22e-23;3!UBERON:0001775;2.22e-23;3!UBERON:0000488;8.38e-18;4!UBERON:0007625;2.69e-14;11!UBERON:0006876;2.69e-14;11!UBERON:0002203;3.35e-12;6!UBERON:0001768;3.35e-12;6!UBERON:0002200;3.35e-12;6!UBERON:0001801;2.28e-11;14!UBERON:0005629;1.51e-09;2!UBERON:0005358;1.51e-09;2!UBERON:0001886;1.51e-09;2!UBERON:0004086;1.51e-09;2!UBERON:0005282;1.51e-09;2!UBERON:0005281;1.51e-09;2!UBERON:0010371;7.95e-09;31!UBERON:0000019;1.57e-08;19!UBERON:0000047;1.57e-08;19!UBERON:0004088;1.57e-08;19!UBERON:0010230;1.57e-08;19!UBERON:0002067;2.96e-08;9!UBERON:0000970;3.95e-08;20!UBERON:0002104;9.08e-08;21!UBERON:0001456;9.08e-08;21!UBERON:0000020;3.87e-07;23!UBERON:0001032;7.31e-07;24!UBERON:0004456;7.31e-07;24!UBERON:0000412;8.86e-07;3!UBERON:0001992;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.10e-23,3;UBERON:0001775,2.10e-23,3;UBERON:0000488,8.04e-18,4;UBERON:0007625,2.69e-14,11;UBERON:0006876,2.95e-14,11;UBERON:0002203,3.26e-12,6;UBERON:0001768,3.26e-12,6;UBERON:0002200,3.26e-12,6;UBERON:0001801,2.28e-11,14;UBERON:0005629,1.86e-09,2;UBERON:0005358,1.86e-09,2;UBERON:0001886,1.86e-09,2;UBERON:0004086,1.86e-09,2;UBERON:0005282,1.86e-09,2;UBERON:0005281,1.86e-09,2;UBERON:0005085,6.88e-09,31;UBERON:0002067,2.75e-08,9;UBERON:0004016,2.75e-08,9;UBERON:0010083,2.75e-08,9;UBERON:0000019,3.95e-08,20;UBERON:0000047,3.95e-08,20;UBERON:0010312,3.95e-08,20;UBERON:0004088,3.95e-08,20;UBERON:0010230,3.95e-08,20;UBERON:0003072,3.95e-08,20;UBERON:0004128,3.95e-08,20;UBERON:0003071,3.95e-08,20;UBERON:0000970,9.08e-08,21;UBERON:0002104,9.08e-08,21;UBERON:0001456,1.94e-07,22;UBERON:0000020,7.32e-07,24;UBERON:0001032,7.32e-07,24;UBERON:0004456,7.32e-07,24;UBERON:0000412,9.64e-07,3;UBERON:0001992,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.61560529038394,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,2.4390233720882,3.07421749925941,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.49333509683432,0,0,0.163461903113459,0.454072282934794,1.15235184896,0,0,0,0,0.23486899728753,0.971237666208789,1.68540968042698,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.51336800074665,1.55126058909333,0,0,0,0,0,0,0.532844358032199,0,0,0,1.62868092146868,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,1.44781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.464841513839837,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0.808729926293264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.397429223405979,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,8.76482793111074,0,0,0,0,0,0,0,0,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0,0.63718706865481,0,0.776314784381297,0.829412415681711,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00108261702862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:75719740..75719766,+ | |||
}} |
Revision as of 19:44, 10 September 2013
Short description: | p@chr11:75719740..75719766, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:75719740..75719766, + |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.10e-23 | 3 |
ciliated epithelial cell | 2.10e-23 | 3 |
multi-ciliated epithelial cell | 2.10e-23 | 3 |
non-pigmented ciliary epithelial cell | 2.10e-23 | 3 |
mesenchymal stem cell of Wharton's jelly | 7.37e-18 | 1 |
fibroblast of choroid plexus | 1.86e-09 | 2 |
hair follicle dermal papilla cell | 9.64e-07 | 3 |
stem cell of epidermis | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.10e-23 | 3 |
ciliary body | 2.10e-23 | 3 |
atypical epithelium | 8.04e-18 | 4 |
pigment epithelium of eye | 2.69e-14 | 11 |
vasculature of organ | 2.95e-14 | 11 |
vasculature of eye | 3.26e-12 | 6 |
uvea | 3.26e-12 | 6 |
vasculature of head | 3.26e-12 | 6 |
anterior segment of eyeball | 2.28e-11 | 14 |
vascular plexus | 1.86e-09 | 2 |
ventricle of nervous system | 1.86e-09 | 2 |
choroid plexus | 1.86e-09 | 2 |
brain ventricle | 1.86e-09 | 2 |
ventricular system of brain | 1.86e-09 | 2 |
ventricular system of central nervous system | 1.86e-09 | 2 |
ectodermal placode | 6.88e-09 | 31 |
dermis | 2.75e-08 | 9 |
dermatome | 2.75e-08 | 9 |
future dermis | 2.75e-08 | 9 |
camera-type eye | 3.95e-08 | 20 |
simple eye | 3.95e-08 | 20 |
immature eye | 3.95e-08 | 20 |
ocular region | 3.95e-08 | 20 |
eyeball of camera-type eye | 3.95e-08 | 20 |
optic cup | 3.95e-08 | 20 |
optic vesicle | 3.95e-08 | 20 |
eye primordium | 3.95e-08 | 20 |
eye | 9.08e-08 | 21 |
visual system | 9.08e-08 | 21 |
face | 1.94e-07 | 22 |
sense organ | 7.32e-07 | 24 |
sensory system | 7.32e-07 | 24 |
entire sense organ system | 7.32e-07 | 24 |
dermal papilla | 9.64e-07 | 3 |
papillary layer of dermis | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 5.80e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.