FFCP PHASE1:Hg19::chr11:7660906..7660910,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9250|TSSclassifier=N|UniProt=|association_with_transcript=-52bp_to_ENST00000532172_5end|coexpression_cluster_id=C3202|description=CAGE_peak_17_at_PPFIBP2_5end|id=chr11:7660906..7660910,+|ontology_enrichment_celltype=CL:0002368!9.37e-10!13;CL:0002202!5.12e-08!9;CL:0002632!5.12e-08!9|ontology_enrichment_celltype_v019=CL:0002202;2.68e-32;9!CL:0002632;2.68e-32;9!CL:0002368;3.49e-30;13!CL:0000307;2.27e-25;3!CL:0002328;4.73e-25;3!CL:0000136;5.89e-10;13!CL:0000312;2.11e-07;5|ontology_enrichment_celltype_v019_2=CL:0002202,2.55e-32,9;CL:0002632,2.55e-32,9;CL:0002368,3.36e-30,13;CL:0002328,2.37e-25,3;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002076,8.15e-09,42;CL:0000136,1.06e-08,15;CL:0000312,2.01e-07,5|ontology_enrichment_development_v019=CL:0000377;2.27e-25;3|ontology_enrichment_disease=DOID:305!6.89e-09!106;DOID:162!6.63e-08!235;DOID:14566!2.11e-07!239;DOID:0050687!3.24e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004815;4.73e-25;3!UBERON:0002031;4.73e-25;3!UBERON:0007196;3.19e-19;15!UBERON:0001558;3.19e-19;15!UBERON:0002185;2.79e-15;5!UBERON:0003126;3.33e-11;7!UBERON:0001005;3.33e-11;7!UBERON:0000485;4.54e-11;7!UBERON:0005178;2.38e-08;34!UBERON:0002224;2.38e-08;34!UBERON:0005181;1.77e-07;35!UBERON:0000072;3.26e-07;37!UBERON:0000065;4.33e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.37e-25,3;UBERON:0002031,2.37e-25,3;UBERON:0007196,3.10e-19,15;UBERON:0001558,3.10e-19,15;UBERON:0002185,1.86e-15,5;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000485,8.15e-09,9;UBERON:0005178,3.25e-08,34;UBERON:0002224,3.25e-08,34;UBERON:0005181,5.78e-08,35;UBERON:0008947,2.71e-07,38;UBERON:0003258,2.71e-07,38|phase1_expression=0,0,0,0,0,0.872338524100369,0,1.26343974685366,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,1.83884244895785,2.409647350226,2.21852406100073,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.89694817844431,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,1.50793458617446,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.355123450626254,0.410635780069046,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0,0,0.165284915360978,0.192190067365106,5.87018477475087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,1.05844323998063,6.03272047982209,9.80018863751903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.808815160325942,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.568967241427498,0,0.236387681767936,1.37897349296586,0,0,0,0,1.52581736317083,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0.948768663620925,0.317873157960757,0,0,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0,0.34823682632161,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.411125773940253,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0.67952103036807,0.627617077873999,0.203996435272644,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.412618309791701,1.66176135211674,0,3.0952078182318,0,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0.246277562248017,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-52bp_to_ENST00000532172_5end | |||
|coexpression_cluster_id=C3202 | |||
|description=CAGE_peak_17_at_PPFIBP2_5end | |||
|id=chr11:7660906..7660910,+ | |||
|ontology_enrichment_celltype=CL:0002368!9.37e-10!13;CL:0002202!5.12e-08!9;CL:0002632!5.12e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.68e-32;9!CL:0002632;2.68e-32;9!CL:0002368;3.49e-30;13!CL:0000307;2.27e-25;3!CL:0002328;4.73e-25;3!CL:0000136;5.89e-10;13!CL:0000312;2.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.55e-32,9;CL:0002632,2.55e-32,9;CL:0002368,3.36e-30,13;CL:0002328,2.37e-25,3;CL:0000068,4.21e-25,3;CL:0000069,4.21e-25,3;CL:0000307,4.21e-25,3;CL:0000377,4.21e-25,3;CL:0002076,8.15e-09,42;CL:0000136,1.06e-08,15;CL:0000312,2.01e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;2.27e-25;3 | |||
|ontology_enrichment_disease=DOID:305!6.89e-09!106;DOID:162!6.63e-08!235;DOID:14566!2.11e-07!239;DOID:0050687!3.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.73e-25;3!UBERON:0002031;4.73e-25;3!UBERON:0007196;3.19e-19;15!UBERON:0001558;3.19e-19;15!UBERON:0002185;2.79e-15;5!UBERON:0003126;3.33e-11;7!UBERON:0001005;3.33e-11;7!UBERON:0000485;4.54e-11;7!UBERON:0005178;2.38e-08;34!UBERON:0002224;2.38e-08;34!UBERON:0005181;1.77e-07;35!UBERON:0000072;3.26e-07;37!UBERON:0000065;4.33e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.37e-25,3;UBERON:0002031,2.37e-25,3;UBERON:0007196,3.10e-19,15;UBERON:0001558,3.10e-19,15;UBERON:0002185,1.86e-15,5;UBERON:0003126,4.32e-11,7;UBERON:0001005,4.32e-11,7;UBERON:0000485,8.15e-09,9;UBERON:0005178,3.25e-08,34;UBERON:0002224,3.25e-08,34;UBERON:0005181,5.78e-08,35;UBERON:0008947,2.71e-07,38;UBERON:0003258,2.71e-07,38 | |||
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|short_description=p17@PPFIBP2 | |||
}} |
Revision as of 19:46, 10 September 2013
Short description: | p17@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_PPFIBP2_5end |
Coexpression cluster: | C3202_Tracheal_Small_squamous_Bronchial_hairy_Mammary_Keratinocyte |
Association with transcript: | -52bp_to_ENST00000532172_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.55e-32 | 9 |
epithelial cell of lower respiratory tract | 2.55e-32 | 9 |
respiratory epithelial cell | 3.36e-30 | 13 |
bronchial epithelial cell | 2.37e-25 | 3 |
duct epithelial cell | 4.21e-25 | 3 |
branched duct epithelial cell | 4.21e-25 | 3 |
tracheal epithelial cell | 4.21e-25 | 3 |
tracheoblast | 4.21e-25 | 3 |
endo-epithelial cell | 8.15e-09 | 42 |
fat cell | 1.06e-08 | 15 |
keratinocyte | 2.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.37e-25 | 3 |
epithelium of bronchus | 2.37e-25 | 3 |
tracheobronchial tree | 3.10e-19 | 15 |
lower respiratory tract | 3.10e-19 | 15 |
bronchus | 1.86e-15 | 5 |
trachea | 4.32e-11 | 7 |
respiratory airway | 4.32e-11 | 7 |
simple columnar epithelium | 8.15e-09 | 9 |
thoracic cavity element | 3.25e-08 | 34 |
thoracic cavity | 3.25e-08 | 34 |
thoracic segment organ | 5.78e-08 | 35 |
respiratory primordium | 2.71e-07 | 38 |
endoderm of foregut | 2.71e-07 | 38 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.