FFCP PHASE1:Hg19::chr12:125003069..125003080,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9612|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7673|TSSclassifier=W|UniProt=C9J330|association_with_transcript=-229bp_to_ENST00000420698,uc001ugk.1_5end|description=CAGE_peak_20_at_NCOR2_5end|id=chr12:125003069..125003080,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002586;7.14e-10;3!CL:0000149;1.30e-07;4|ontology_enrichment_celltype_v019_2=CL:0002586,3.65e-10,3;CL:0000149,7.87e-08,4|ontology_enrichment_development_v019=UBERON:0000358;1.83e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;5.03e-08;1!DOID:3149;5.03e-08;1|ontology_enrichment_disease_v019_2=DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1|ontology_enrichment_uberon=UBERON:0002346!8.61e-19!90;UBERON:0007023!2.05e-18!115;UBERON:0003075!2.98e-18!86;UBERON:0007284!2.98e-18!86;UBERON:0005743!5.53e-16!86;UBERON:0000073!1.14e-15!94;UBERON:0001016!1.14e-15!94;UBERON:0001049!2.01e-14!57;UBERON:0005068!2.01e-14!57;UBERON:0006241!2.01e-14!57;UBERON:0007135!2.01e-14!57;UBERON:0001017!2.62e-14!82;UBERON:0000955!5.34e-13!69;UBERON:0006238!5.34e-13!69;UBERON:0003056!1.10e-12!61;UBERON:0000153!1.81e-12!129;UBERON:0007811!1.81e-12!129;UBERON:0002616!3.24e-12!59;UBERON:0000924!8.20e-12!173;UBERON:0006601!8.20e-12!173;UBERON:0000033!1.86e-11!123;UBERON:0004121!2.79e-11!169;UBERON:0002780!7.75e-11!41;UBERON:0001890!7.75e-11!41;UBERON:0006240!7.75e-11!41;UBERON:0003080!2.32e-10!42;UBERON:0000119!6.73e-10!312;UBERON:0000483!7.38e-10!309;UBERON:0000481!3.27e-09!347;UBERON:0001893!4.13e-09!34;UBERON:0002020!4.54e-09!34;UBERON:0003528!4.54e-09!34;UBERON:0000477!1.01e-08!286;UBERON:0002791!1.03e-08!33;UBERON:0000475!1.04e-08!365;UBERON:0001869!7.51e-08!32|ontology_enrichment_uberon_v019=UBERON:0000966;7.18e-13;5!UBERON:0005388;7.18e-13;5!UBERON:0001802;7.18e-13;5!UBERON:0001781;7.14e-10;3!UBERON:0001782;7.14e-10;3!UBERON:0007029;5.03e-08;1!UBERON:0002135;5.03e-08;1!UBERON:0000014;1.30e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.94e-11,6;UBERON:0005388,4.94e-11,6;UBERON:0001802,4.94e-11,6;UBERON:0001782,3.65e-10,3;UBERON:0005424,3.65e-10,3;UBERON:0007029,3.34e-08,1;UBERON:0002135,4.11e-08,1;UBERON:0001781,7.87e-08,4;UBERON:0000014,1.64e-07,4|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.724232594804119,0,0,0.283604451492204,0,0.790513071238134,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,1.04142150482278,0.56530794192401,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.432359860250884,0,0,0,0,0,0,0.600686115687835,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.52456774533478,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,1.20378439891088,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,1.96808787419823,1.30151357865721,0,0.183138929636687,0,0,0,0,0.96670718292122,0.154048617114644,0.307007349452259,0,0.214840489736547,0.145016693914229,0.0852266274161009,1.69160867728801,0,0,0,0.10115778085555,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0.842516912477962,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.562677665642051,0.333926115068718,0,0.211125408127993,1.59398390600856,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0.262379999988587,0,0.682760689712998,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |||
|TSSclassifier=W | |||
|UniProt=C9J330 | |||
|association_with_transcript=-229bp_to_ENST00000420698,uc001ugk.1_5end | |||
|description=CAGE_peak_20_at_NCOR2_5end | |||
|id=chr12:125003069..125003080,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;7.14e-10;3!CL:0000149;1.30e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.65e-10,3;CL:0000149,7.87e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.83e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.03e-08;1!DOID:3149;5.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002346!8.61e-19!90;UBERON:0007023!2.05e-18!115;UBERON:0003075!2.98e-18!86;UBERON:0007284!2.98e-18!86;UBERON:0005743!5.53e-16!86;UBERON:0000073!1.14e-15!94;UBERON:0001016!1.14e-15!94;UBERON:0001049!2.01e-14!57;UBERON:0005068!2.01e-14!57;UBERON:0006241!2.01e-14!57;UBERON:0007135!2.01e-14!57;UBERON:0001017!2.62e-14!82;UBERON:0000955!5.34e-13!69;UBERON:0006238!5.34e-13!69;UBERON:0003056!1.10e-12!61;UBERON:0000153!1.81e-12!129;UBERON:0007811!1.81e-12!129;UBERON:0002616!3.24e-12!59;UBERON:0000924!8.20e-12!173;UBERON:0006601!8.20e-12!173;UBERON:0000033!1.86e-11!123;UBERON:0004121!2.79e-11!169;UBERON:0002780!7.75e-11!41;UBERON:0001890!7.75e-11!41;UBERON:0006240!7.75e-11!41;UBERON:0003080!2.32e-10!42;UBERON:0000119!6.73e-10!312;UBERON:0000483!7.38e-10!309;UBERON:0000481!3.27e-09!347;UBERON:0001893!4.13e-09!34;UBERON:0002020!4.54e-09!34;UBERON:0003528!4.54e-09!34;UBERON:0000477!1.01e-08!286;UBERON:0002791!1.03e-08!33;UBERON:0000475!1.04e-08!365;UBERON:0001869!7.51e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;7.18e-13;5!UBERON:0005388;7.18e-13;5!UBERON:0001802;7.18e-13;5!UBERON:0001781;7.14e-10;3!UBERON:0001782;7.14e-10;3!UBERON:0007029;5.03e-08;1!UBERON:0002135;5.03e-08;1!UBERON:0000014;1.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.94e-11,6;UBERON:0005388,4.94e-11,6;UBERON:0001802,4.94e-11,6;UBERON:0001782,3.65e-10,3;UBERON:0005424,3.65e-10,3;UBERON:0007029,3.34e-08,1;UBERON:0002135,4.11e-08,1;UBERON:0001781,7.87e-08,4;UBERON:0000014,1.64e-07,4 | |||
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| |||
|short_description=p20@NCOR2 | |||
}} |
Revision as of 21:35, 10 September 2013
Short description: | p20@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_NCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -229bp_to_ENST00000420698, uc001ugk.1_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | C9J330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.65e-10 | 3 |
visual pigment cell | 7.87e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 4.94e-11 | 6 |
photoreceptor array | 4.94e-11 | 6 |
posterior segment of eyeball | 4.94e-11 | 6 |
pigmented layer of retina | 3.65e-10 | 3 |
presumptive retinal pigmented epithelium | 3.65e-10 | 3 |
surface | 3.34e-08 | 1 |
mitral valve | 4.11e-08 | 1 |
layer of retina | 7.87e-08 | 4 |
zone of skin | 1.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.21e-07 | 1 |
keratoacanthoma | 1.21e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.