FFCP PHASE1:Hg19::chr12:54366975..54367001,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5123|TSSclassifier=S|UniProt=O43248|association_with_transcript=63bp_to_ENST00000243082_5end|coexpression_cluster_id=C1676|description=CAGE_peak_1_at_HOXC11_5end|id=chr12:54366975..54367001,+|ontology_enrichment_celltype=CL:0002594!2.53e-07!4;CL:0000188!4.12e-07!9|ontology_enrichment_celltype_v019=CL:0002594;4.32e-13;4|ontology_enrichment_celltype_v019_2=CL:0002594,4.97e-13,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.62e-11!143;DOID:305!6.34e-07!106|ontology_enrichment_disease_v019=DOID:171;8.72e-08;10|ontology_enrichment_disease_v019_2=DOID:0050687,1.78e-16,143;DOID:305,9.91e-10,106;DOID:162,1.30e-08,235;DOID:14566,2.98e-08,239;DOID:171,9.32e-08,10|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0001310!2.53e-07!4;UBERON:0001557!4.17e-07!19;UBERON:0004905!4.94e-07!5;UBERON:0000982!4.94e-07!5;UBERON:0004770!4.94e-07!5|ontology_enrichment_uberon_v019=UBERON:0001737;7.68e-19;9!UBERON:0001557;7.68e-19;9!UBERON:0002346;4.13e-13;4!UBERON:0000923;4.13e-13;4!UBERON:0010316;4.13e-13;4!UBERON:0005291;4.13e-13;4!UBERON:0001310;4.32e-13;4!UBERON:0010260;1.55e-11;9!UBERON:0002050;1.76e-10;5!UBERON:0005423;1.76e-10;5|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.42e-19,9;UBERON:0001310,4.97e-13,4;UBERON:0010260,1.57e-11,9;UBERON:0001557,1.82e-10,19|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,1.82829939739887,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49448680551801,0.939475989150119,0.323745888736263,0.561803226808994,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,1.03056216018252,1.11670113798954,0.843881661206331,0.292311015483596,0,0,0,0,0,2.37384829234683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,2.86593973132773,1.92808823906786,2.20587945464788,2.61455332910887,3.32178866755535,1.75280700608214,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,3.01586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0,2.60588947434988,0,2.37585561880029,0,0,0,0,0,0,0,0,7.13184525203592,0.289562613335158,9.8628634824184,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0,0,0,0,0,2.27407504055985,3.10419213877515,2.65690239414175,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,3.44559322797703,0,0,3.57681657680851,0,0,0.275673144969061,0.751941714077915,2.17525040871343,0.255679882248303,2.40386496246191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26111791621678,7.74558745249375,3.09865162785466,1.43411352204052,1.76848273823618,4.280052617775,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88424992044177,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.439524537815682,0,0,0.852408440419239,0,0,0,0,0,0,0,12.8786498958076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8154799990946,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,2.72346158797475,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0,0.17472666824203,0,3.77349692027432,10.8172189287555,4.51635013792651,0,0,0,0,0,0,3.71547627196126,0,0,0.799238438328521,3.02589876023623,0,0,0.288109595976299,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,1.21543982470953,0,0,0,0,5.89697727923543,0,3.80361822045529,0,0,0,0,0,0,0,0,0,0,0,2.20652288940233,13.6047948865077,6.56859550572712,6.70373901567893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,1.15525666150338,0,0,1.5913297769302,0,0.20170506870352,0,0,0,2.06998520703863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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |||
|TSSclassifier=S | |||
|UniProt=O43248 | |||
|association_with_transcript=63bp_to_ENST00000243082_5end | |||
|coexpression_cluster_id=C1676 | |||
|description=CAGE_peak_1_at_HOXC11_5end | |||
|id=chr12:54366975..54367001,+ | |||
|ontology_enrichment_celltype=CL:0002594!2.53e-07!4;CL:0000188!4.12e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002594;4.32e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.97e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.62e-11!143;DOID:305!6.34e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:171;8.72e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.78e-16,143;DOID:305,9.91e-10,106;DOID:162,1.30e-08,235;DOID:14566,2.98e-08,239;DOID:171,9.32e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0001310!2.53e-07!4;UBERON:0001557!4.17e-07!19;UBERON:0004905!4.94e-07!5;UBERON:0000982!4.94e-07!5;UBERON:0004770!4.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.68e-19;9!UBERON:0001557;7.68e-19;9!UBERON:0002346;4.13e-13;4!UBERON:0000923;4.13e-13;4!UBERON:0010316;4.13e-13;4!UBERON:0005291;4.13e-13;4!UBERON:0001310;4.32e-13;4!UBERON:0010260;1.55e-11;9!UBERON:0002050;1.76e-10;5!UBERON:0005423;1.76e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.42e-19,9;UBERON:0001310,4.97e-13,4;UBERON:0010260,1.57e-11,9;UBERON:0001557,1.82e-10,19 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,1.82829939739887,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49448680551801,0.939475989150119,0.323745888736263,0.561803226808994,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,1.03056216018252,1.11670113798954,0.843881661206331,0.292311015483596,0,0,0,0,0,2.37384829234683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65629520055781,2.86593973132773,1.92808823906786,2.20587945464788,2.61455332910887,3.32178866755535,1.75280700608214,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,3.01586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0.258543431515556,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0,2.60588947434988,0,2.37585561880029,0,0,0,0,0,0,0,0,7.13184525203592,0.289562613335158,9.8628634824184,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.542530047399471,0,0,0,0,0,2.27407504055985,3.10419213877515,2.65690239414175,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,3.44559322797703,0,0,3.57681657680851,0,0,0.275673144969061,0.751941714077915,2.17525040871343,0.255679882248303,2.40386496246191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26111791621678,7.74558745249375,3.09865162785466,1.43411352204052,1.76848273823618,4.280052617775,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88424992044177,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.439524537815682,0,0,0.852408440419239,0,0,0,0,0,0,0,12.8786498958076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8154799990946,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,2.72346158797475,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0,0.17472666824203,0,3.77349692027432,10.8172189287555,4.51635013792651,0,0,0,0,0,0,3.71547627196126,0,0,0.799238438328521,3.02589876023623,0,0,0.288109595976299,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.577000469484979,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0.537266523244462,0,0.219284049578707,0,0,0,0,0,1.21543982470953,0,0,0,0,5.89697727923543,0,3.80361822045529,0,0,0,0,0,0,0,0,0,0,0,2.20652288940233,13.6047948865077,6.56859550572712,6.70373901567893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,1.15525666150338,0,0,1.5913297769302,0,0.20170506870352,0,0,0,2.06998520703863,0,0,0,0,0,0,0.496211178389294,6.8589785300252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84762057278609,0,0,0,0,0,8.48562405187314,6.7804726198006,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,4.71121121353166,0.731507549893617,0,0.513314034281235,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0.707029641304878,0,0,0.4226557275834,2.0391253762538,0,0,0,0.178553938605658,0,0.320965466756673,0,0,0,14.3572121595798,0,0,0,2.60396512716726,0,1.29787968637137,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p1@HOXC11 | |||
}} |
Revision as of 23:20, 10 September 2013
Short description: | p1@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 63bp_to_ENST00000243082_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | O43248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.97e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.42e-19 | 9 |
umbilical artery | 4.97e-13 | 4 |
umbilical blood vessel | 1.57e-11 | 9 |
upper respiratory tract | 1.82e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.78e-16 | 143 |
carcinoma | 9.91e-10 | 106 |
cancer | 1.30e-08 | 235 |
disease of cellular proliferation | 2.98e-08 | 239 |
neuroectodermal tumor | 9.32e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.