FFCP PHASE1:Hg19::chr12:97856938..97856959,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C30|description=CAGE_peak_at_chr12:97856938..97856959,+|id=chr12:97856938..97856959,+|ontology_enrichment_celltype=CL:0000064!4.07e-10!3;CL:0005012!4.07e-10!3;CL:0000067!4.07e-10!3;CL:0002304!4.07e-10!3;CL:0002322!3.37e-09!5|ontology_enrichment_celltype_v019=CL:0000064;1.65e-32;3!CL:0000067;1.65e-32;3!CL:0005012;1.65e-32;3!CL:0002304;1.65e-32;3!CL:0000710;9.06e-09;20|ontology_enrichment_celltype_v019_2=CL:0000064,1.57e-32,3;CL:0000067,1.57e-32,3;CL:0005012,1.57e-32,3;CL:0002304,1.57e-32,3;CL:0000710,9.15e-09,20|ontology_enrichment_development_v019=UBERON:0005754;3.45e-12;1!UBERON:0007123;1.36e-09;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;1.01e-11;1|ontology_enrichment_disease_v019_2=DOID:2355,7.76e-12,1|ontology_enrichment_uberon=UBERON:0001049!8.80e-37!57;UBERON:0005068!8.80e-37!57;UBERON:0006241!8.80e-37!57;UBERON:0007135!8.80e-37!57;UBERON:0003075!9.81e-36!86;UBERON:0007284!9.81e-36!86;UBERON:0002616!3.30e-35!59;UBERON:0002346!1.05e-33!90;UBERON:0007023!4.77e-31!115;UBERON:0002780!1.03e-30!41;UBERON:0001890!1.03e-30!41;UBERON:0006240!1.03e-30!41;UBERON:0005743!1.84e-30!86;UBERON:0000955!1.88e-30!69;UBERON:0006238!1.88e-30!69;UBERON:0001017!2.90e-30!82;UBERON:0003080!7.66e-30!42;UBERON:0003056!1.37e-29!61;UBERON:0000073!1.00e-26!94;UBERON:0001016!1.00e-26!94;UBERON:0000153!1.34e-24!129;UBERON:0007811!1.34e-24!129;UBERON:0002020!5.77e-23!34;UBERON:0003528!5.77e-23!34;UBERON:0001893!1.59e-22!34;UBERON:0000033!1.09e-21!123;UBERON:0001869!1.16e-21!32;UBERON:0002791!7.00e-21!33;UBERON:0001950!7.83e-19!20;UBERON:0004121!2.11e-18!169;UBERON:0000924!9.84e-18!173;UBERON:0006601!9.84e-18!173;UBERON:0000956!3.59e-17!25;UBERON:0000203!3.59e-17!25;UBERON:0002619!6.37e-17!22;UBERON:0000200!3.84e-15!6;UBERON:0003296!2.89e-12!4;UBERON:0010133!2.89e-12!4;UBERON:0000477!3.42e-12!286;UBERON:0002298!3.53e-12!8;UBERON:0001894!3.22e-10!7;UBERON:0006222!3.22e-10!7;UBERON:0000025!3.65e-10!194;UBERON:0001778!4.07e-10!3;UBERON:0001775!4.07e-10!3;UBERON:0006947!7.97e-10!3;UBERON:0004054!7.97e-10!3;UBERON:0000483!1.11e-09!309;UBERON:0000119!1.78e-09!312;UBERON:0000988!3.30e-09!3;UBERON:0004111!4.85e-09!241;UBERON:0001896!5.58e-09!3;UBERON:0005290!5.58e-09!3;UBERON:0010096!5.58e-09!3;UBERON:0002771!1.88e-08!3;UBERON:0003076!3.62e-08!15;UBERON:0003057!3.62e-08!15;UBERON:0004733!7.25e-08!12;UBERON:0002028!7.25e-08!12;UBERON:0007277!7.25e-08!12;UBERON:0000488!1.17e-07!4;UBERON:0000475!1.74e-07!365;UBERON:0005904!1.91e-07!4;UBERON:0002308!3.06e-07!9;UBERON:0000125!3.06e-07!9;UBERON:0004732!3.33e-07!13;UBERON:0000007!3.39e-07!2;UBERON:0000341!5.26e-07!2;UBERON:0000481!6.84e-07!347;UBERON:0000064!7.26e-07!219;UBERON:0001870!9.08e-07!2;UBERON:0001905!9.89e-07!2;UBERON:0002757!9.89e-07!2;UBERON:0010134!9.89e-07!2;UBERON:0002784!9.89e-07!2;UBERON:0005408!9.89e-07!2;UBERON:0001899!9.89e-07!2|ontology_enrichment_uberon_v019=UBERON:0001778;1.65e-32;3!UBERON:0001775;1.65e-32;3!UBERON:0000488;1.45e-24;4!UBERON:0003296;7.09e-24;4!UBERON:0010133;7.09e-24;4!UBERON:0000341;1.13e-21;2!UBERON:0000007;1.13e-21;2!UBERON:0002203;1.35e-16;6!UBERON:0001768;1.35e-16;6!UBERON:0002200;1.35e-16;6!UBERON:0006947;4.28e-15;3!UBERON:0004054;4.28e-15;3!UBERON:0001894;6.35e-14;7!UBERON:0000998;3.45e-12;1!UBERON:0006868;3.45e-12;1!UBERON:0001000;1.01e-11;1!UBERON:0005352;1.01e-11;1!UBERON:0005904;1.47e-11;4!UBERON:0002046;1.36e-09;5!UBERON:0007625;2.62e-09;11!UBERON:0006876;2.62e-09;11!UBERON:0000974;7.58e-08;6!UBERON:0001801;2.04e-07;14!UBERON:0002368;5.76e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.57e-32,3;UBERON:0001775,1.57e-32,3;UBERON:0000488,1.40e-24,4;UBERON:0003296,3.93e-24,4;UBERON:0010133,3.93e-24,4;UBERON:0000007,6.01e-22,2;UBERON:0000341,2.92e-21,2;UBERON:0002203,1.31e-16,6;UBERON:0001768,1.31e-16,6;UBERON:0002200,1.31e-16,6;UBERON:0006947,5.68e-15,3;UBERON:0004054,5.68e-15,3;UBERON:0001894,4.55e-14,7;UBERON:0006222,4.55e-14,7;UBERON:0000998,3.27e-12,1;UBERON:0006868,3.27e-12,1;UBERON:0001000,1.63e-11,1;UBERON:0005352,1.63e-11,1;UBERON:0005904,1.82e-11,4;UBERON:0002046,1.36e-09,5;UBERON:0004117,1.36e-09,5;UBERON:0007689,1.36e-09,5;UBERON:0007123,1.36e-09,5;UBERON:0003091,1.36e-09,5;UBERON:0007625,2.59e-09,11;UBERON:0006876,2.59e-09,11;UBERON:0003056,1.19e-07,61;UBERON:0002368,1.79e-07,35;UBERON:0001801,2.02e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69720317909424,1.55210578223795,2.54720878510066,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr12:97856938..97856959,+ | |||
|id=chr12:97856938..97856959,+ | |||
|ontology_enrichment_celltype=CL:0000064!4.07e-10!3;CL:0005012!4.07e-10!3;CL:0000067!4.07e-10!3;CL:0002304!4.07e-10!3;CL:0002322!3.37e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.65e-32;3!CL:0000067;1.65e-32;3!CL:0005012;1.65e-32;3!CL:0002304;1.65e-32;3!CL:0000710;9.06e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.57e-32,3;CL:0000067,1.57e-32,3;CL:0005012,1.57e-32,3;CL:0002304,1.57e-32,3;CL:0000710,9.15e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.45e-12;1!UBERON:0007123;1.36e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.80e-37!57;UBERON:0005068!8.80e-37!57;UBERON:0006241!8.80e-37!57;UBERON:0007135!8.80e-37!57;UBERON:0003075!9.81e-36!86;UBERON:0007284!9.81e-36!86;UBERON:0002616!3.30e-35!59;UBERON:0002346!1.05e-33!90;UBERON:0007023!4.77e-31!115;UBERON:0002780!1.03e-30!41;UBERON:0001890!1.03e-30!41;UBERON:0006240!1.03e-30!41;UBERON:0005743!1.84e-30!86;UBERON:0000955!1.88e-30!69;UBERON:0006238!1.88e-30!69;UBERON:0001017!2.90e-30!82;UBERON:0003080!7.66e-30!42;UBERON:0003056!1.37e-29!61;UBERON:0000073!1.00e-26!94;UBERON:0001016!1.00e-26!94;UBERON:0000153!1.34e-24!129;UBERON:0007811!1.34e-24!129;UBERON:0002020!5.77e-23!34;UBERON:0003528!5.77e-23!34;UBERON:0001893!1.59e-22!34;UBERON:0000033!1.09e-21!123;UBERON:0001869!1.16e-21!32;UBERON:0002791!7.00e-21!33;UBERON:0001950!7.83e-19!20;UBERON:0004121!2.11e-18!169;UBERON:0000924!9.84e-18!173;UBERON:0006601!9.84e-18!173;UBERON:0000956!3.59e-17!25;UBERON:0000203!3.59e-17!25;UBERON:0002619!6.37e-17!22;UBERON:0000200!3.84e-15!6;UBERON:0003296!2.89e-12!4;UBERON:0010133!2.89e-12!4;UBERON:0000477!3.42e-12!286;UBERON:0002298!3.53e-12!8;UBERON:0001894!3.22e-10!7;UBERON:0006222!3.22e-10!7;UBERON:0000025!3.65e-10!194;UBERON:0001778!4.07e-10!3;UBERON:0001775!4.07e-10!3;UBERON:0006947!7.97e-10!3;UBERON:0004054!7.97e-10!3;UBERON:0000483!1.11e-09!309;UBERON:0000119!1.78e-09!312;UBERON:0000988!3.30e-09!3;UBERON:0004111!4.85e-09!241;UBERON:0001896!5.58e-09!3;UBERON:0005290!5.58e-09!3;UBERON:0010096!5.58e-09!3;UBERON:0002771!1.88e-08!3;UBERON:0003076!3.62e-08!15;UBERON:0003057!3.62e-08!15;UBERON:0004733!7.25e-08!12;UBERON:0002028!7.25e-08!12;UBERON:0007277!7.25e-08!12;UBERON:0000488!1.17e-07!4;UBERON:0000475!1.74e-07!365;UBERON:0005904!1.91e-07!4;UBERON:0002308!3.06e-07!9;UBERON:0000125!3.06e-07!9;UBERON:0004732!3.33e-07!13;UBERON:0000007!3.39e-07!2;UBERON:0000341!5.26e-07!2;UBERON:0000481!6.84e-07!347;UBERON:0000064!7.26e-07!219;UBERON:0001870!9.08e-07!2;UBERON:0001905!9.89e-07!2;UBERON:0002757!9.89e-07!2;UBERON:0010134!9.89e-07!2;UBERON:0002784!9.89e-07!2;UBERON:0005408!9.89e-07!2;UBERON:0001899!9.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.65e-32;3!UBERON:0001775;1.65e-32;3!UBERON:0000488;1.45e-24;4!UBERON:0003296;7.09e-24;4!UBERON:0010133;7.09e-24;4!UBERON:0000341;1.13e-21;2!UBERON:0000007;1.13e-21;2!UBERON:0002203;1.35e-16;6!UBERON:0001768;1.35e-16;6!UBERON:0002200;1.35e-16;6!UBERON:0006947;4.28e-15;3!UBERON:0004054;4.28e-15;3!UBERON:0001894;6.35e-14;7!UBERON:0000998;3.45e-12;1!UBERON:0006868;3.45e-12;1!UBERON:0001000;1.01e-11;1!UBERON:0005352;1.01e-11;1!UBERON:0005904;1.47e-11;4!UBERON:0002046;1.36e-09;5!UBERON:0007625;2.62e-09;11!UBERON:0006876;2.62e-09;11!UBERON:0000974;7.58e-08;6!UBERON:0001801;2.04e-07;14!UBERON:0002368;5.76e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.57e-32,3;UBERON:0001775,1.57e-32,3;UBERON:0000488,1.40e-24,4;UBERON:0003296,3.93e-24,4;UBERON:0010133,3.93e-24,4;UBERON:0000007,6.01e-22,2;UBERON:0000341,2.92e-21,2;UBERON:0002203,1.31e-16,6;UBERON:0001768,1.31e-16,6;UBERON:0002200,1.31e-16,6;UBERON:0006947,5.68e-15,3;UBERON:0004054,5.68e-15,3;UBERON:0001894,4.55e-14,7;UBERON:0006222,4.55e-14,7;UBERON:0000998,3.27e-12,1;UBERON:0006868,3.27e-12,1;UBERON:0001000,1.63e-11,1;UBERON:0005352,1.63e-11,1;UBERON:0005904,1.82e-11,4;UBERON:0002046,1.36e-09,5;UBERON:0004117,1.36e-09,5;UBERON:0007689,1.36e-09,5;UBERON:0007123,1.36e-09,5;UBERON:0003091,1.36e-09,5;UBERON:0007625,2.59e-09,11;UBERON:0006876,2.59e-09,11;UBERON:0003056,1.19e-07,61;UBERON:0002368,1.79e-07,35;UBERON:0001801,2.02e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69720317909424,1.55210578223795,2.54720878510066,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,2.07322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,3.12524990879926,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,1.18375320854817,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,0,0,0.425246896606173,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.79339561045614,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0,0.41023272848151,0,0.0691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.253663240775627,0,0,0,0,0,1.60710550763486,0.336283722218824,1.82089681270989,1.59363533945908,0,0,0,0.747667062745149,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,1.74362138052188,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0,0,0,0.218559560503957,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,1.0661699095049,1.1903221573187,0,0,0,2.41859201457027,4.04234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:97856938..97856959,+ | |||
}} |
Revision as of 01:10, 11 September 2013
Short description: | p@chr12:97856938..97856959, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:97856938..97856959, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.57e-32 | 3 |
ciliated epithelial cell | 1.57e-32 | 3 |
multi-ciliated epithelial cell | 1.57e-32 | 3 |
non-pigmented ciliary epithelial cell | 1.57e-32 | 3 |
neurecto-epithelial cell | 9.15e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.57e-32 | 3 |
ciliary body | 1.57e-32 | 3 |
atypical epithelium | 1.40e-24 | 4 |
gland of diencephalon | 3.93e-24 | 4 |
neuroendocrine gland | 3.93e-24 | 4 |
pituitary gland | 6.01e-22 | 2 |
throat | 2.92e-21 | 2 |
vasculature of eye | 1.31e-16 | 6 |
uvea | 1.31e-16 | 6 |
vasculature of head | 1.31e-16 | 6 |
male genital duct | 5.68e-15 | 3 |
internal male genitalia | 5.68e-15 | 3 |
diencephalon | 4.55e-14 | 7 |
future diencephalon | 4.55e-14 | 7 |
seminal vesicle | 3.27e-12 | 1 |
seminal fluid secreting gland | 3.27e-12 | 1 |
vas deferens | 1.63e-11 | 1 |
spermatic cord | 1.63e-11 | 1 |
duct of male reproductive system | 1.82e-11 | 4 |
thyroid gland | 1.36e-09 | 5 |
pharyngeal pouch | 1.36e-09 | 5 |
thyroid diverticulum | 1.36e-09 | 5 |
pharyngeal pouch 2 | 1.36e-09 | 5 |
thyroid primordium | 1.36e-09 | 5 |
pigment epithelium of eye | 2.59e-09 | 11 |
vasculature of organ | 2.59e-09 | 11 |
pre-chordal neural plate | 1.19e-07 | 61 |
endocrine gland | 1.79e-07 | 35 |
anterior segment of eyeball | 2.02e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.76e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.