FFCP PHASE1:Hg19::chr13:110866123..110866134,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:110866123..110866134,-|id=chr13:110866123..110866134,-|ontology_enrichment_celltype=CL:0000222!8.31e-16!119;CL:0002321!1.59e-12!248;CL:0000220!2.18e-12!246;CL:0000183!2.94e-12!59;CL:0000144!8.27e-12!625;CL:0000055!2.92e-11!180;CL:0000548!3.88e-11!679;CL:0000004!3.88e-11!679;CL:0000255!3.88e-11!679;CL:0000012!7.38e-11!682;CL:0002371!1.74e-10!591;CL:0000680!1.58e-09!57;CL:0000056!1.58e-09!57;CL:0000355!1.58e-09!57;CL:1000507!2.62e-09!12;CL:1000494!2.62e-09!12;CL:1000449!3.08e-09!16;CL:0000393!3.46e-09!60;CL:0000211!3.46e-09!60;CL:0000187!5.82e-09!54;CL:0002681!4.95e-08!13;CL:0002584!4.95e-08!13;CL:1000497!8.64e-08!18;CL:0002518!8.64e-08!18;CL:0002078!9.59e-08!44;CL:0002139!1.99e-07!24;CL:0000003!2.11e-07!722;CL:0000115!4.46e-07!35|ontology_enrichment_celltype_v019=CL:1000507;4.11e-20;10!CL:1000494;4.11e-20;10!CL:1000449;6.33e-17;15!CL:1000497;8.83e-15;17!CL:0002518;8.83e-15;17!CL:0002681;3.95e-12;12!CL:0002584;3.95e-12;12!CL:0000669;2.19e-10;4!CL:0000650;5.78e-10;2!CL:1000500;5.78e-10;2!CL:1000618;5.78e-10;2!CL:1001318;5.78e-10;2!CL:0002173;5.78e-10;2!CL:0002549;1.44e-09;2!CL:0002195;3.51e-09;2!CL:0002571;3.51e-09;2!CL:0000708;9.99e-07;3|ontology_enrichment_celltype_v019_2=CL:1000507,4.81e-20,10;CL:1000494,4.81e-20,10;CL:1000449,5.92e-17,15;CL:1000497,8.33e-15,17;CL:0002518,8.33e-15,17;CL:0002681,4.23e-12,12;CL:0002584,4.23e-12,12;CL:0000669,1.58e-10,4;CL:0000650,5.81e-10,2;CL:1000500,5.81e-10,2;CL:1000618,5.81e-10,2;CL:1001318,5.81e-10,2;CL:0002173,5.81e-10,2;CL:0002549,1.45e-09,2;CL:0002195,7.14e-09,2;CL:0002571,7.14e-09,2;CL:0000708,7.32e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.71e-13!110;UBERON:0002049!6.01e-13!79;UBERON:0007798!6.01e-13!79;UBERON:0003914!1.06e-12!118;UBERON:0001009!1.62e-12!113;UBERON:0005256!5.94e-10!143;UBERON:0000490!7.66e-10!138;UBERON:0004872!1.27e-09!84;UBERON:0009773!2.62e-09!12;UBERON:0001231!2.62e-09!12;UBERON:0004810!2.62e-09!12;UBERON:0004211!3.08e-09!16;UBERON:0001285!3.08e-09!16;UBERON:0007684!3.08e-09!16;UBERON:0003220!3.08e-09!16;UBERON:0004208!3.08e-09!16;UBERON:0000055!4.84e-09!69;UBERON:0002331!9.21e-09!10;UBERON:0000358!9.21e-09!10;UBERON:0000307!9.21e-09!10;UBERON:0000091!9.21e-09!10;UBERON:0000087!9.21e-09!10;UBERON:0007806!9.21e-09!10;UBERON:0008780!9.21e-09!10;UBERON:0005728!9.21e-09!10;UBERON:0000119!1.46e-08!312;UBERON:0006555!1.81e-08!17;UBERON:0005103!1.81e-08!17;UBERON:0000083!1.81e-08!17;UBERON:0009201!1.81e-08!17;UBERON:0004819!1.81e-08!17;UBERON:0006553!1.81e-08!17;UBERON:0003074!1.81e-08!17;UBERON:0003060!1.81e-08!17;UBERON:0001134!2.52e-08!61;UBERON:0002036!2.52e-08!61;UBERON:0003082!2.52e-08!61;UBERON:0001981!4.14e-08!60;UBERON:0007500!4.14e-08!60;UBERON:0004537!4.14e-08!60;UBERON:0006965!4.14e-08!60;UBERON:0001225!4.95e-08!13;UBERON:0008987!4.95e-08!13;UBERON:0000353!5.20e-08!17;UBERON:0002385!8.63e-08!63;UBERON:0001015!8.63e-08!63;UBERON:0000383!8.63e-08!63;UBERON:0000080!8.64e-08!18;UBERON:0002120!8.64e-08!18;UBERON:0004875!8.64e-08!18;UBERON:0005721!8.64e-08!18;UBERON:0005754!8.64e-08!18;UBERON:0007297!8.64e-08!18;UBERON:0000483!1.60e-07!309;UBERON:0001851!2.89e-07!16;UBERON:0000478!4.01e-07!24;UBERON:0003887!4.62e-07!21;UBERON:0003064!5.40e-07!37|ontology_enrichment_uberon_v019=UBERON:0004211;4.11e-20;10!UBERON:0009773;4.11e-20;10!UBERON:0001231;4.11e-20;10!UBERON:0004810;4.11e-20;10!UBERON:0006555;6.33e-17;15!UBERON:0004819;6.33e-17;15!UBERON:0001285;6.33e-17;15!UBERON:0007684;6.33e-17;15!UBERON:0002331;9.41e-15;10!UBERON:0001225;3.95e-12;12!UBERON:0008987;3.95e-12;12!UBERON:0002113;4.32e-10;24!UBERON:0011143;4.32e-10;24!UBERON:0003567;5.78e-10;2!UBERON:0003838;5.78e-10;2!UBERON:0003586;5.78e-10;2!UBERON:0005169;5.78e-10;2!UBERON:0002321;5.78e-10;2!UBERON:0005215;5.78e-10;2!UBERON:0002303;5.78e-10;2!UBERON:0002319;5.78e-10;2!UBERON:0001851;1.41e-09;15!UBERON:0000353;1.41e-09;15!UBERON:0005629;1.44e-09;2!UBERON:0005358;1.44e-09;2!UBERON:0001886;1.44e-09;2!UBERON:0004086;1.44e-09;2!UBERON:0005282;1.44e-09;2!UBERON:0005281;1.44e-09;2!UBERON:0005284;3.66e-08;5!UBERON:0000489;3.94e-08;29!UBERON:0006554;8.10e-08;30!UBERON:0001008;8.10e-08;30!UBERON:0000478;8.41e-08;24!UBERON:0003210;9.99e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.81e-20,10;UBERON:0004211,5.92e-17,15;UBERON:0009773,5.92e-17,15;UBERON:0001231,5.92e-17,15;UBERON:0001285,5.92e-17,15;UBERON:0007684,5.92e-17,15;UBERON:0004208,5.92e-17,15;UBERON:0006555,8.19e-16,16;UBERON:0004819,8.19e-16,16;UBERON:0002331,7.05e-15,10;UBERON:0000358,7.05e-15,10;UBERON:0000307,7.05e-15,10;UBERON:0000091,7.05e-15,10;UBERON:0000087,7.05e-15,10;UBERON:0007010,7.05e-15,10;UBERON:0007806,7.05e-15,10;UBERON:0008780,7.05e-15,10;UBERON:0005728,7.05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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:110866123..110866134,- | |||
|id=chr13:110866123..110866134,- | |||
|ontology_enrichment_celltype=CL:0000222!8.31e-16!119;CL:0002321!1.59e-12!248;CL:0000220!2.18e-12!246;CL:0000183!2.94e-12!59;CL:0000144!8.27e-12!625;CL:0000055!2.92e-11!180;CL:0000548!3.88e-11!679;CL:0000004!3.88e-11!679;CL:0000255!3.88e-11!679;CL:0000012!7.38e-11!682;CL:0002371!1.74e-10!591;CL:0000680!1.58e-09!57;CL:0000056!1.58e-09!57;CL:0000355!1.58e-09!57;CL:1000507!2.62e-09!12;CL:1000494!2.62e-09!12;CL:1000449!3.08e-09!16;CL:0000393!3.46e-09!60;CL:0000211!3.46e-09!60;CL:0000187!5.82e-09!54;CL:0002681!4.95e-08!13;CL:0002584!4.95e-08!13;CL:1000497!8.64e-08!18;CL:0002518!8.64e-08!18;CL:0002078!9.59e-08!44;CL:0002139!1.99e-07!24;CL:0000003!2.11e-07!722;CL:0000115!4.46e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.11e-20;10!CL:1000494;4.11e-20;10!CL:1000449;6.33e-17;15!CL:1000497;8.83e-15;17!CL:0002518;8.83e-15;17!CL:0002681;3.95e-12;12!CL:0002584;3.95e-12;12!CL:0000669;2.19e-10;4!CL:0000650;5.78e-10;2!CL:1000500;5.78e-10;2!CL:1000618;5.78e-10;2!CL:1001318;5.78e-10;2!CL:0002173;5.78e-10;2!CL:0002549;1.44e-09;2!CL:0002195;3.51e-09;2!CL:0002571;3.51e-09;2!CL:0000708;9.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.81e-20,10;CL:1000494,4.81e-20,10;CL:1000449,5.92e-17,15;CL:1000497,8.33e-15,17;CL:0002518,8.33e-15,17;CL:0002681,4.23e-12,12;CL:0002584,4.23e-12,12;CL:0000669,1.58e-10,4;CL:0000650,5.81e-10,2;CL:1000500,5.81e-10,2;CL:1000618,5.81e-10,2;CL:1001318,5.81e-10,2;CL:0002173,5.81e-10,2;CL:0002549,1.45e-09,2;CL:0002195,7.14e-09,2;CL:0002571,7.14e-09,2;CL:0000708,7.32e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.71e-13!110;UBERON:0002049!6.01e-13!79;UBERON:0007798!6.01e-13!79;UBERON:0003914!1.06e-12!118;UBERON:0001009!1.62e-12!113;UBERON:0005256!5.94e-10!143;UBERON:0000490!7.66e-10!138;UBERON:0004872!1.27e-09!84;UBERON:0009773!2.62e-09!12;UBERON:0001231!2.62e-09!12;UBERON:0004810!2.62e-09!12;UBERON:0004211!3.08e-09!16;UBERON:0001285!3.08e-09!16;UBERON:0007684!3.08e-09!16;UBERON:0003220!3.08e-09!16;UBERON:0004208!3.08e-09!16;UBERON:0000055!4.84e-09!69;UBERON:0002331!9.21e-09!10;UBERON:0000358!9.21e-09!10;UBERON:0000307!9.21e-09!10;UBERON:0000091!9.21e-09!10;UBERON:0000087!9.21e-09!10;UBERON:0007806!9.21e-09!10;UBERON:0008780!9.21e-09!10;UBERON:0005728!9.21e-09!10;UBERON:0000119!1.46e-08!312;UBERON:0006555!1.81e-08!17;UBERON:0005103!1.81e-08!17;UBERON:0000083!1.81e-08!17;UBERON:0009201!1.81e-08!17;UBERON:0004819!1.81e-08!17;UBERON:0006553!1.81e-08!17;UBERON:0003074!1.81e-08!17;UBERON:0003060!1.81e-08!17;UBERON:0001134!2.52e-08!61;UBERON:0002036!2.52e-08!61;UBERON:0003082!2.52e-08!61;UBERON:0001981!4.14e-08!60;UBERON:0007500!4.14e-08!60;UBERON:0004537!4.14e-08!60;UBERON:0006965!4.14e-08!60;UBERON:0001225!4.95e-08!13;UBERON:0008987!4.95e-08!13;UBERON:0000353!5.20e-08!17;UBERON:0002385!8.63e-08!63;UBERON:0001015!8.63e-08!63;UBERON:0000383!8.63e-08!63;UBERON:0000080!8.64e-08!18;UBERON:0002120!8.64e-08!18;UBERON:0004875!8.64e-08!18;UBERON:0005721!8.64e-08!18;UBERON:0005754!8.64e-08!18;UBERON:0007297!8.64e-08!18;UBERON:0000483!1.60e-07!309;UBERON:0001851!2.89e-07!16;UBERON:0000478!4.01e-07!24;UBERON:0003887!4.62e-07!21;UBERON:0003064!5.40e-07!37 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.81e-20,10;UBERON:0004211,5.92e-17,15;UBERON:0009773,5.92e-17,15;UBERON:0001231,5.92e-17,15;UBERON:0001285,5.92e-17,15;UBERON:0007684,5.92e-17,15;UBERON:0004208,5.92e-17,15;UBERON:0006555,8.19e-16,16;UBERON:0004819,8.19e-16,16;UBERON:0002331,7.05e-15,10;UBERON:0000358,7.05e-15,10;UBERON:0000307,7.05e-15,10;UBERON:0000091,7.05e-15,10;UBERON:0000087,7.05e-15,10;UBERON:0007010,7.05e-15,10;UBERON:0007806,7.05e-15,10;UBERON:0008780,7.05e-15,10;UBERON:0005728,7.05e-15,10;UBERON:0003914,2.34e-13,117;UBERON:0004535,3.95e-12,109;UBERON:0001225,4.23e-12,12;UBERON:0008987,4.23e-12,12;UBERON:0001009,1.12e-11,112;UBERON:0003567,5.81e-10,2;UBERON:0003838,5.81e-10,2;UBERON:0003586,5.81e-10,2;UBERON:0005169,5.81e-10,2;UBERON:0002321,5.81e-10,2;UBERON:0005215,5.81e-10,2;UBERON:0002303,5.81e-10,2;UBERON:0002319,5.81e-10,2;UBERON:0005629,1.45e-09,2;UBERON:0005358,1.45e-09,2;UBERON:0001886,1.45e-09,2;UBERON:0004086,1.45e-09,2;UBERON:0005282,1.45e-09,2;UBERON:0005281,1.45e-09,2;UBERON:0001851,1.48e-09,15;UBERON:0000353,1.48e-09,15;UBERON:0002113,3.12e-09,26;UBERON:0003918,3.12e-09,26;UBERON:0011143,3.12e-09,26;UBERON:0005095,3.12e-09,26;UBERON:0007687,3.12e-09,26;UBERON:0002049,1.04e-08,78;UBERON:0007798,1.04e-08,78;UBERON:0005284,2.62e-08,5;UBERON:0000478,7.68e-08,24;UBERON:0003103,1.04e-07,68;UBERON:0000489,1.54e-07,31;UBERON:0003210,7.32e-07,3 | |||
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| |||
|short_description=p@chr13:110866123..110866134,- | |||
}} |
Revision as of 01:28, 11 September 2013
Short description: | p@chr13:110866123..110866134, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:110866123..110866134, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.81e-20 | 10 |
nephron tubule epithelial cell | 4.81e-20 | 10 |
epithelial cell of nephron | 5.92e-17 | 15 |
kidney cell | 8.33e-15 | 17 |
kidney epithelial cell | 8.33e-15 | 17 |
kidney cortical cell | 4.23e-12 | 12 |
renal cortical epithelial cell | 4.23e-12 | 12 |
pericyte cell | 1.58e-10 | 4 |
mesangial cell | 5.81e-10 | 2 |
kidney interstitial cell | 5.81e-10 | 2 |
juxtaglomerular complex cell | 5.81e-10 | 2 |
renal interstitial pericyte | 5.81e-10 | 2 |
extraglomerular mesangial cell | 5.81e-10 | 2 |
fibroblast of choroid plexus | 1.45e-09 | 2 |
hepatic stem cell | 7.14e-09 | 2 |
hepatic mesenchymal stem cell | 7.14e-09 | 2 |
leptomeningeal cell | 7.32e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.