FFCP PHASE1:Hg19::chr13:36046521..36046554,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C699|description=CAGE_peak_at_chr13:36046521..36046554,+|id=chr13:36046521..36046554,+|ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3|ontology_enrichment_celltype_v019=CL:0000333;6.29e-20;5!CL:0000064;3.58e-15;3!CL:0000067;3.58e-15;3!CL:0005012;3.58e-15;3!CL:0002304;3.58e-15;3!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002321;1.28e-11;15!CL:0000075;1.18e-09;27!CL:0000710;1.15e-08;20!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6|ontology_enrichment_celltype_v019_2=CL:0000064,3.00e-15,3;CL:0000067,3.00e-15,3;CL:0005012,3.00e-15,3;CL:0002304,3.00e-15,3;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0000133,3.40e-10,59;CL:0000075,1.17e-09,27;CL:0000710,1.29e-08,20;CL:0000221,3.08e-08,72;CL:0000197,9.01e-08,6;CL:0000098,9.01e-08,6;CL:0002167,9.01e-08,6|ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0003099;8.62e-12;1!UBERON:0003852;8.62e-12;1!CL:0000221;2.26e-07;72|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;1.03e-16;6!DOID:171;2.96e-10;10!DOID:3095;5.59e-08;22!DOID:2994;5.59e-08;22|ontology_enrichment_disease_v019_2=DOID:169,1.06e-16,6;DOID:171,3.01e-10,10;DOID:3095,4.97e-08,22;DOID:2994,4.97e-08,22|ontology_enrichment_uberon=UBERON:0003075!4.00e-19!86;UBERON:0007284!4.00e-19!86;UBERON:0002346!4.30e-19!90;UBERON:0000033!3.39e-15!123;UBERON:0000153!5.24e-15!129;UBERON:0007811!5.24e-15!129;UBERON:0003076!9.33e-15!15;UBERON:0003057!9.33e-15!15;UBERON:0000924!5.63e-13!173;UBERON:0006601!5.63e-13!173;UBERON:0000970!6.72e-13!20;UBERON:0000073!6.91e-13!94;UBERON:0001016!6.91e-13!94;UBERON:0004121!9.06e-13!169;UBERON:0000020!1.10e-12!23;UBERON:0001049!2.88e-12!57;UBERON:0005068!2.88e-12!57;UBERON:0006241!2.88e-12!57;UBERON:0007135!2.88e-12!57;UBERON:0001456!3.36e-12!21;UBERON:0002104!3.87e-12!21;UBERON:0001032!5.14e-12!24;UBERON:0004456!5.14e-12!24;UBERON:0002298!1.47e-11!8;UBERON:0007625!1.57e-11!11;UBERON:0005743!2.02e-11!86;UBERON:0000019!2.34e-11!19;UBERON:0000047!2.34e-11!19;UBERON:0004088!2.34e-11!19;UBERON:0003072!2.34e-11!19;UBERON:0003071!2.34e-11!19;UBERON:0004128!2.34e-11!19;UBERON:0003056!3.09e-11!61;UBERON:0001444!1.12e-10!48;UBERON:0000475!1.44e-10!365;UBERON:0004733!3.78e-10!12;UBERON:0002028!3.78e-10!12;UBERON:0007277!3.78e-10!12;UBERON:0000966!4.49e-10!5;UBERON:0005388!4.49e-10!5;UBERON:0001802!4.49e-10!5;UBERON:0004732!3.03e-09!13;UBERON:0001017!2.28e-08!82;UBERON:0002616!2.74e-08!59;UBERON:0002680!2.81e-08!9;UBERON:0001895!2.81e-08!9;UBERON:0010092!2.81e-08!9;UBERON:0000955!5.00e-08!69;UBERON:0006238!5.00e-08!69;UBERON:0001778!7.77e-08!3;UBERON:0001775!7.77e-08!3;UBERON:0000988!8.25e-07!3;UBERON:0002240!9.50e-07!3|ontology_enrichment_uberon_v019=UBERON:0000013;6.29e-20;5!UBERON:0002410;6.29e-20;5!UBERON:0001778;3.58e-15;3!UBERON:0001775;3.58e-15;3!UBERON:0001456;1.93e-12;21!UBERON:0005705;8.62e-12;1!UBERON:0008193;8.62e-12;1!UBERON:0010912;8.62e-12;1!UBERON:0002514;8.62e-12;1!UBERON:0003457;8.62e-12;1!UBERON:0008907;8.62e-12;1!UBERON:0008001;8.62e-12;1!UBERON:0007213;8.62e-12;1!UBERON:0009891;8.62e-12;1!UBERON:0007914;8.62e-12;1!UBERON:0007375;8.62e-12;1!UBERON:0003323;8.62e-12;1!UBERON:0010258;8.62e-12;1!UBERON:0005253;8.62e-12;1!UBERON:0007842;8.62e-12;1!UBERON:0002397;8.62e-12;1!UBERON:0003113;8.62e-12;1!UBERON:0003277;8.62e-12;1!UBERON:0001709;8.62e-12;1!UBERON:0002244;8.62e-12;1!UBERON:0005620;8.62e-12;1!UBERON:0010364;8.62e-12;1!UBERON:0004288;8.62e-12;1!UBERON:0000488;1.29e-11;4!UBERON:0000010;2.46e-11;8!UBERON:0007625;3.11e-09;11!UBERON:0000019;4.13e-09;19!UBERON:0000047;4.13e-09;19!UBERON:0004088;4.13e-09;19!UBERON:0010230;4.13e-09;19!UBERON:0000970;1.15e-08;20!UBERON:0002104;2.93e-08;21!UBERON:0002203;4.90e-08;6!UBERON:0001768;4.90e-08;6!UBERON:0002200;4.90e-08;6!UBERON:0002037;6.83e-08;6!UBERON:0000020;1.48e-07;23!UBERON:0001801;2.32e-07;14!UBERON:0001032;3.02e-07;24!UBERON:0004456;3.02e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.52e-20,5;UBERON:0002410,6.52e-20,5;UBERON:0001778,3.00e-15,3;UBERON:0001775,3.00e-15,3;UBERON:0005705,5.62e-12,1;UBERON:0008193,5.62e-12,1;UBERON:0010912,5.62e-12,1;UBERON:0002514,5.62e-12,1;UBERON:0003457,5.62e-12,1;UBERON:0008907,5.62e-12,1;UBERON:0008001,5.62e-12,1;UBERON:0007213,5.62e-12,1;UBERON:0009891,5.62e-12,1;UBERON:0007914,5.62e-12,1;UBERON:0009292,5.62e-12,1;UBERON:0003099,5.62e-12,1;UBERON:0007375,5.62e-12,1;UBERON:0003323,5.62e-12,1;UBERON:0010258,5.62e-12,1;UBERON:0007842,5.62e-12,1;UBERON:0009494,5.62e-12,1;UBERON:0010042,5.62e-12,1;UBERON:0010045,5.62e-12,1;UBERON:0010259,5.62e-12,1;UBERON:0010359,5.62e-12,1;UBERON:0009526,5.62e-12,1;UBERON:0002397,5.62e-12,1;UBERON:0003113,5.62e-12,1;UBERON:0003277,5.62e-12,1;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C699 | |||
|description=CAGE_peak_at_chr13:36046521..36046554,+ | |||
|id=chr13:36046521..36046554,+ | |||
|ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.29e-20;5!CL:0000064;3.58e-15;3!CL:0000067;3.58e-15;3!CL:0005012;3.58e-15;3!CL:0002304;3.58e-15;3!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002321;1.28e-11;15!CL:0000075;1.18e-09;27!CL:0000710;1.15e-08;20!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.00e-15,3;CL:0000067,3.00e-15,3;CL:0005012,3.00e-15,3;CL:0002304,3.00e-15,3;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0000133,3.40e-10,59;CL:0000075,1.17e-09,27;CL:0000710,1.29e-08,20;CL:0000221,3.08e-08,72;CL:0000197,9.01e-08,6;CL:0000098,9.01e-08,6;CL:0002167,9.01e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0003099;8.62e-12;1!UBERON:0003852;8.62e-12;1!CL:0000221;2.26e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.03e-16;6!DOID:171;2.96e-10;10!DOID:3095;5.59e-08;22!DOID:2994;5.59e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.06e-16,6;DOID:171,3.01e-10,10;DOID:3095,4.97e-08,22;DOID:2994,4.97e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003075!4.00e-19!86;UBERON:0007284!4.00e-19!86;UBERON:0002346!4.30e-19!90;UBERON:0000033!3.39e-15!123;UBERON:0000153!5.24e-15!129;UBERON:0007811!5.24e-15!129;UBERON:0003076!9.33e-15!15;UBERON:0003057!9.33e-15!15;UBERON:0000924!5.63e-13!173;UBERON:0006601!5.63e-13!173;UBERON:0000970!6.72e-13!20;UBERON:0000073!6.91e-13!94;UBERON:0001016!6.91e-13!94;UBERON:0004121!9.06e-13!169;UBERON:0000020!1.10e-12!23;UBERON:0001049!2.88e-12!57;UBERON:0005068!2.88e-12!57;UBERON:0006241!2.88e-12!57;UBERON:0007135!2.88e-12!57;UBERON:0001456!3.36e-12!21;UBERON:0002104!3.87e-12!21;UBERON:0001032!5.14e-12!24;UBERON:0004456!5.14e-12!24;UBERON:0002298!1.47e-11!8;UBERON:0007625!1.57e-11!11;UBERON:0005743!2.02e-11!86;UBERON:0000019!2.34e-11!19;UBERON:0000047!2.34e-11!19;UBERON:0004088!2.34e-11!19;UBERON:0003072!2.34e-11!19;UBERON:0003071!2.34e-11!19;UBERON:0004128!2.34e-11!19;UBERON:0003056!3.09e-11!61;UBERON:0001444!1.12e-10!48;UBERON:0000475!1.44e-10!365;UBERON:0004733!3.78e-10!12;UBERON:0002028!3.78e-10!12;UBERON:0007277!3.78e-10!12;UBERON:0000966!4.49e-10!5;UBERON:0005388!4.49e-10!5;UBERON:0001802!4.49e-10!5;UBERON:0004732!3.03e-09!13;UBERON:0001017!2.28e-08!82;UBERON:0002616!2.74e-08!59;UBERON:0002680!2.81e-08!9;UBERON:0001895!2.81e-08!9;UBERON:0010092!2.81e-08!9;UBERON:0000955!5.00e-08!69;UBERON:0006238!5.00e-08!69;UBERON:0001778!7.77e-08!3;UBERON:0001775!7.77e-08!3;UBERON:0000988!8.25e-07!3;UBERON:0002240!9.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.29e-20;5!UBERON:0002410;6.29e-20;5!UBERON:0001778;3.58e-15;3!UBERON:0001775;3.58e-15;3!UBERON:0001456;1.93e-12;21!UBERON:0005705;8.62e-12;1!UBERON:0008193;8.62e-12;1!UBERON:0010912;8.62e-12;1!UBERON:0002514;8.62e-12;1!UBERON:0003457;8.62e-12;1!UBERON:0008907;8.62e-12;1!UBERON:0008001;8.62e-12;1!UBERON:0007213;8.62e-12;1!UBERON:0009891;8.62e-12;1!UBERON:0007914;8.62e-12;1!UBERON:0007375;8.62e-12;1!UBERON:0003323;8.62e-12;1!UBERON:0010258;8.62e-12;1!UBERON:0005253;8.62e-12;1!UBERON:0007842;8.62e-12;1!UBERON:0002397;8.62e-12;1!UBERON:0003113;8.62e-12;1!UBERON:0003277;8.62e-12;1!UBERON:0001709;8.62e-12;1!UBERON:0002244;8.62e-12;1!UBERON:0005620;8.62e-12;1!UBERON:0010364;8.62e-12;1!UBERON:0004288;8.62e-12;1!UBERON:0000488;1.29e-11;4!UBERON:0000010;2.46e-11;8!UBERON:0007625;3.11e-09;11!UBERON:0000019;4.13e-09;19!UBERON:0000047;4.13e-09;19!UBERON:0004088;4.13e-09;19!UBERON:0010230;4.13e-09;19!UBERON:0000970;1.15e-08;20!UBERON:0002104;2.93e-08;21!UBERON:0002203;4.90e-08;6!UBERON:0001768;4.90e-08;6!UBERON:0002200;4.90e-08;6!UBERON:0002037;6.83e-08;6!UBERON:0000020;1.48e-07;23!UBERON:0001801;2.32e-07;14!UBERON:0001032;3.02e-07;24!UBERON:0004456;3.02e-07;24 | |||
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|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02511414925017,0.665188192387692,1.58102614247627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0.843881661206331,0.487185025805993,0,0.276149695926898,0.484938170456436,0,0,0.508681776931463,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,1.85488647960123,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,1.07057393278297,1.26161932027148,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0.552896299656123,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.496771223531068,2.62862406378839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58104239650225,1.40172254815686,0,4.47759516587257,0,0.212574920101683,0,0,0,0,0,1.76337971845342,0,0,0,0,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.611727596791485,0,0,0,0,0,0,0.913158720509496,0,0,1.35805433935647,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,1.42922671769058,0,0,0.218559560503957,0,0,0.235676547101626,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:36046521..36046554,+ | |||
}} |
Revision as of 02:06, 11 September 2013
Short description: | p@chr13:36046521..36046554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:36046521..36046554, + |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.00e-15 | 3 |
ciliated epithelial cell | 3.00e-15 | 3 |
multi-ciliated epithelial cell | 3.00e-15 | 3 |
non-pigmented ciliary epithelial cell | 3.00e-15 | 3 |
multinucleate cell | 8.64e-12 | 1 |
myotube | 8.64e-12 | 1 |
neurectodermal cell | 3.40e-10 | 59 |
columnar/cuboidal epithelial cell | 1.17e-09 | 27 |
neurecto-epithelial cell | 1.29e-08 | 20 |
ectodermal cell | 3.08e-08 | 72 |
receptor cell | 9.01e-08 | 6 |
sensory epithelial cell | 9.01e-08 | 6 |
olfactory epithelial cell | 9.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.06e-16 | 6 |
neuroectodermal tumor | 3.01e-10 | 10 |
germ cell and embryonal cancer | 4.97e-08 | 22 |
germ cell cancer | 4.97e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.