FFCP PHASE1:Hg19::chr16:15818142..15818168,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4629|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7569|TSSclassifier=S|UniProt=Q68D89|association_with_transcript=16bp_to_CR749516_5end|coexpression_cluster_id=C48|description=CAGE_peak_15_at_MYH11_5end|id=chr16:15818142..15818168,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;2.27e-19;2!UBERON:0005754;6.73e-11;1!UBERON:0004874;8.95e-11;1!UBERON:0006242;1.08e-10;1!UBERON:0009143;1.37e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.82e-31!115;UBERON:0006947!1.24e-12!3;UBERON:0004054!1.24e-12!3;UBERON:0003135!4.22e-12!11;UBERON:0005409!3.08e-10!35;UBERON:0005904!1.43e-09!4;UBERON:0000059!2.29e-08!11;UBERON:0003101!1.25e-07!22;UBERON:0000079!1.25e-07!22;UBERON:0000160!2.25e-07!27;UBERON:0001155!7.30e-07!9;UBERON:0000481!7.84e-07!347|ontology_enrichment_uberon_v019=UBERON:0006947;3.59e-28;3!UBERON:0004054;3.59e-28;3!UBERON:0005904;2.66e-21;4!UBERON:0003135;1.08e-13;11!UBERON:0005409;1.16e-13;22!UBERON:0000160;2.32e-12;17!UBERON:0004921;3.45e-11;33!UBERON:0000998;6.73e-11;1!UBERON:0006868;6.73e-11;1!UBERON:0000989;8.95e-11;1!UBERON:0008811;8.95e-11;1!UBERON:0002146;1.08e-10;1!UBERON:0005623;1.08e-10;1!UBERON:0004175;1.08e-10;21!UBERON:0001000;1.37e-10;1!UBERON:0005352;1.37e-10;1!UBERON:0003101;2.58e-10;22!UBERON:0000079;2.58e-10;22!UBERON:0000996;3.15e-10;1!UBERON:0001301;3.15e-10;1!UBERON:0001155;1.86e-09;9!UBERON:0000058;7.43e-09;10!UBERON:0002108;3.04e-08;4!UBERON:0000059;7.92e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.99e-28,3;UBERON:0004054,2.99e-28,3;UBERON:0005904,2.32e-21,4;UBERON:0007023,1.37e-15,114;UBERON:0003135,1.01e-13,11;UBERON:0000160,2.46e-12,17;UBERON:0005409,5.04e-12,25;UBERON:0003064,2.19e-11,28;UBERON:0000998,6.73e-11,1;UBERON:0006868,6.73e-11,1;UBERON:0000989,8.95e-11,1;UBERON:0008811,8.95e-11,1;UBERON:0006258,8.95e-11,1;UBERON:0005876,8.95e-11,1;UBERON:0004874,8.95e-11,1;UBERON:0002146,1.08e-10,1;UBERON:0005623,1.08e-10,1;UBERON:0001000,1.43e-10,1;UBERON:0005352,1.43e-10,1;UBERON:0003101,2.41e-10,22;UBERON:0000079,2.41e-10,22;UBERON:0001301,2.50e-10,1;UBERON:0000996,3.01e-10,1;UBERON:0001155,1.95e-09,9;UBERON:0004175,5.31e-09,25;UBERON:0002108,3.16e-08,4;UBERON:0004876,3.62e-08,11;UBERON:0000059,8.21e-08,11;UBERON:0005156,7.57e-07,59;UBERON:0000990,7.57e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,0.552567831062295,0,0,0,0,0,0,0,9.46976694114563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.53900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.06149077404007,1.22206028986725,0,0,0,0,0,0,0,0,0,3.15667522279512,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,3.4916045935831,0,0.225980740780532,0,0,0,0,0,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,4.12488763221031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,7.44316767583941,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,1.33438257845874,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,16.0887079072553,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.694567422971502,2.18559560503957,0,13.9734543399726,0,0,0,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,2.92134555298607,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.6820082839641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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |||
|TSSclassifier=S | |||
|UniProt=Q68D89 | |||
|association_with_transcript=16bp_to_CR749516_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_15_at_MYH11_5end | |||
|id=chr16:15818142..15818168,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.27e-19;2!UBERON:0005754;6.73e-11;1!UBERON:0004874;8.95e-11;1!UBERON:0006242;1.08e-10;1!UBERON:0009143;1.37e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.82e-31!115;UBERON:0006947!1.24e-12!3;UBERON:0004054!1.24e-12!3;UBERON:0003135!4.22e-12!11;UBERON:0005409!3.08e-10!35;UBERON:0005904!1.43e-09!4;UBERON:0000059!2.29e-08!11;UBERON:0003101!1.25e-07!22;UBERON:0000079!1.25e-07!22;UBERON:0000160!2.25e-07!27;UBERON:0001155!7.30e-07!9;UBERON:0000481!7.84e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.59e-28;3!UBERON:0004054;3.59e-28;3!UBERON:0005904;2.66e-21;4!UBERON:0003135;1.08e-13;11!UBERON:0005409;1.16e-13;22!UBERON:0000160;2.32e-12;17!UBERON:0004921;3.45e-11;33!UBERON:0000998;6.73e-11;1!UBERON:0006868;6.73e-11;1!UBERON:0000989;8.95e-11;1!UBERON:0008811;8.95e-11;1!UBERON:0002146;1.08e-10;1!UBERON:0005623;1.08e-10;1!UBERON:0004175;1.08e-10;21!UBERON:0001000;1.37e-10;1!UBERON:0005352;1.37e-10;1!UBERON:0003101;2.58e-10;22!UBERON:0000079;2.58e-10;22!UBERON:0000996;3.15e-10;1!UBERON:0001301;3.15e-10;1!UBERON:0001155;1.86e-09;9!UBERON:0000058;7.43e-09;10!UBERON:0002108;3.04e-08;4!UBERON:0000059;7.92e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.99e-28,3;UBERON:0004054,2.99e-28,3;UBERON:0005904,2.32e-21,4;UBERON:0007023,1.37e-15,114;UBERON:0003135,1.01e-13,11;UBERON:0000160,2.46e-12,17;UBERON:0005409,5.04e-12,25;UBERON:0003064,2.19e-11,28;UBERON:0000998,6.73e-11,1;UBERON:0006868,6.73e-11,1;UBERON:0000989,8.95e-11,1;UBERON:0008811,8.95e-11,1;UBERON:0006258,8.95e-11,1;UBERON:0005876,8.95e-11,1;UBERON:0004874,8.95e-11,1;UBERON:0002146,1.08e-10,1;UBERON:0005623,1.08e-10,1;UBERON:0001000,1.43e-10,1;UBERON:0005352,1.43e-10,1;UBERON:0003101,2.41e-10,22;UBERON:0000079,2.41e-10,22;UBERON:0001301,2.50e-10,1;UBERON:0000996,3.01e-10,1;UBERON:0001155,1.95e-09,9;UBERON:0004175,5.31e-09,25;UBERON:0002108,3.16e-08,4;UBERON:0004876,3.62e-08,11;UBERON:0000059,8.21e-08,11;UBERON:0005156,7.57e-07,59;UBERON:0000990,7.57e-07,59 | |||
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|short_description=p15@MYH11 | |||
}} |
Revision as of 09:24, 11 September 2013
Short description: | p15@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 16bp_to_CR749516_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | Q68D89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.99e-28 | 3 |
internal male genitalia | 2.99e-28 | 3 |
duct of male reproductive system | 2.32e-21 | 4 |
adult organism | 1.37e-15 | 114 |
male reproductive organ | 1.01e-13 | 11 |
intestine | 2.46e-12 | 17 |
gastrointestinal system | 5.04e-12 | 25 |
intermediate mesoderm | 2.19e-11 | 28 |
seminal vesicle | 6.73e-11 | 1 |
seminal fluid secreting gland | 6.73e-11 | 1 |
penis | 8.95e-11 | 1 |
intromittent organ | 8.95e-11 | 1 |
lateral plate mesenchyme | 8.95e-11 | 1 |
undifferentiated genital tubercle | 8.95e-11 | 1 |
somatopleure | 8.95e-11 | 1 |
pulmonary valve | 1.08e-10 | 1 |
semi-lunar valve | 1.08e-10 | 1 |
vas deferens | 1.43e-10 | 1 |
spermatic cord | 1.43e-10 | 1 |
male organism | 2.41e-10 | 22 |
male reproductive system | 2.41e-10 | 22 |
epididymis | 2.50e-10 | 1 |
vagina | 3.01e-10 | 1 |
colon | 1.95e-09 | 9 |
internal genitalia | 5.31e-09 | 25 |
small intestine | 3.16e-08 | 4 |
urogenital ridge | 3.62e-08 | 11 |
large intestine | 8.21e-08 | 11 |
reproductive structure | 7.57e-07 | 59 |
reproductive system | 7.57e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.