FFCP PHASE1:Hg19::chr16:82068997..82069008,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3294|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5211|TSSclassifier=S|UniProt=P37059|association_with_transcript=131bp_to_ENST00000199936_5end|coexpression_cluster_id=C1223|description=CAGE_peak_5_at_HSD17B2_5end|id=chr16:82068997..82069008,+|ontology_enrichment_celltype=CL:0005020!1.36e-09!6;CL:0002138!1.36e-09!6;CL:0005022!1.36e-09!6;CL:0000066!3.59e-09!254;CL:0000223!5.66e-09!59;CL:0000181!7.82e-08!12;CL:0000417!7.82e-08!12;CL:0000668!7.82e-08!12;CL:0000414!7.82e-08!12;CL:0000412!7.82e-08!12;CL:0000182!7.82e-08!12;CL:0000220!1.80e-07!246;CL:0002321!2.69e-07!248|ontology_enrichment_celltype_v019=CL:0000182;1.48e-15;12!CL:0002586;2.34e-14;3!CL:0000064;1.09e-12;3!CL:0000067;1.09e-12;3!CL:0005012;1.09e-12;3!CL:0002304;1.09e-12;3!CL:0000149;7.14e-11;4!CL:0000306;9.67e-10;4!CL:0002222;9.67e-10;4!CL:0002224;9.67e-10;4!CL:0000075;2.98e-08;27!CL:0000147;1.45e-07;14!CL:0002138;3.15e-07;6|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-16,12;CL:0002586,2.40e-14,3;CL:0000064,1.37e-12,3;CL:0000067,1.37e-12,3;CL:0005012,1.37e-12,3;CL:0002304,1.37e-12,3;CL:0000066,3.62e-11,253;CL:0000149,7.26e-11,4;CL:0000306,8.44e-10,4;CL:0002222,8.44e-10,4;CL:0002224,8.44e-10,4;CL:0000223,3.79e-09,58;CL:0000075,2.96e-08,27;CL:0000147,1.41e-07,14;CL:0005020,3.02e-07,6;CL:0002138,3.02e-07,6;CL:0005022,3.02e-07,6|ontology_enrichment_development_v019=UBERON:0004161;1.36e-12;11!UBERON:0009497;1.46e-10;13!CL:0005022;3.15e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!5.96e-15!11;UBERON:0004921!2.60e-14!129;UBERON:0004185!2.60e-14!129;UBERON:0001007!3.42e-13!155;UBERON:0001555!3.42e-13!155;UBERON:0007026!3.42e-13!155;UBERON:0000970!7.84e-12!20;UBERON:0004119!1.07e-11!169;UBERON:0000925!1.07e-11!169;UBERON:0006595!1.07e-11!169;UBERON:0000161!1.38e-11!35;UBERON:0000020!1.98e-11!23;UBERON:0002104!4.36e-11!21;UBERON:0003929!4.91e-11!54;UBERON:0000019!7.92e-11!19;UBERON:0000047!7.92e-11!19;UBERON:0004088!7.92e-11!19;UBERON:0003072!7.92e-11!19;UBERON:0003071!7.92e-11!19;UBERON:0004128!7.92e-11!19;UBERON:0001032!8.82e-11!24;UBERON:0004456!8.82e-11!24;UBERON:0002365!9.15e-11!31;UBERON:0002330!9.15e-11!31;UBERON:0001444!1.43e-10!48;UBERON:0002530!2.10e-10!59;UBERON:0000481!3.43e-10!347;UBERON:0000162!6.08e-10!14;UBERON:0001353!6.08e-10!14;UBERON:0000163!6.08e-10!14;UBERON:0006866!6.08e-10!14;UBERON:0000164!6.08e-10!14;UBERON:0000931!6.08e-10!14;UBERON:0001456!1.80e-09!21;UBERON:0004122!4.13e-09!15;UBERON:0000077!1.14e-08!130;UBERON:0002107!3.27e-08!19;UBERON:0006925!3.27e-08!19;UBERON:0008836!3.27e-08!19;UBERON:0001046!5.38e-08!19;UBERON:0005911!1.25e-07!82;UBERON:0009854!1.81e-07!23;UBERON:0000488!1.94e-07!4;UBERON:0000475!2.95e-07!365;UBERON:0002367!5.07e-07!11;UBERON:0010147!5.07e-07!11;UBERON:0009846!5.07e-07!11;UBERON:0003353!5.07e-07!11;UBERON:0004902!5.07e-07!11;UBERON:0003820!5.07e-07!11;UBERON:0009847!5.07e-07!11;UBERON:0001044!6.11e-07!6;UBERON:0003293!6.11e-07!6;UBERON:0003294!6.11e-07!6;UBERON:0010047!6.11e-07!6;UBERON:0000167!6.11e-07!6;UBERON:0001473!6.19e-07!8;UBERON:0004536!6.19e-07!8;UBERON:0006558!6.19e-07!8;UBERON:0005085!6.85e-07!29;UBERON:0000160!7.19e-07!27;UBERON:0002465!8.04e-07!10;UBERON:0009497!9.92e-07!25;UBERON:0000015!9.92e-07!25;UBERON:0002423!9.92e-07!25;UBERON:0006235!9.92e-07!25;UBERON:0004161!9.92e-07!25|ontology_enrichment_uberon_v019=UBERON:0007625;1.96e-36;11!UBERON:0000019;1.56e-24;19!UBERON:0000047;1.56e-24;19!UBERON:0004088;1.56e-24;19!UBERON:0010230;1.56e-24;19!UBERON:0000970;3.44e-23;20!UBERON:0002104;5.64e-22;21!UBERON:0001456;5.64e-22;21!UBERON:0000020;7.29e-20;23!UBERON:0001032;6.12e-19;24!UBERON:0004456;6.12e-19;24!UBERON:0000488;1.31e-16;4!UBERON:0002107;1.48e-15;19!UBERON:0006925;1.48e-15;19!UBERON:0000966;1.69e-14;5!UBERON:0005388;1.69e-14;5!UBERON:0001802;1.69e-14;5!UBERON:0001781;2.34e-14;3!UBERON:0001782;2.34e-14;3!UBERON:0010371;1.44e-13;31!UBERON:0001801;2.23e-13;14!UBERON:0002365;2.32e-13;31!UBERON:0002330;2.32e-13;31!UBERON:0001778;1.09e-12;3!UBERON:0001775;1.09e-12;3!UBERON:0002423;1.91e-11;25!UBERON:0002203;4.11e-11;6!UBERON:0001768;4.11e-11;6!UBERON:0002200;4.11e-11;6!UBERON:0000160;8.96e-11;17!UBERON:0010077;9.67e-10;4!UBERON:0005389;9.67e-10;4!UBERON:0000484;9.67e-10;4!UBERON:0000965;9.67e-10;4!UBERON:0001803;9.67e-10;4!UBERON:0001444;2.19e-09;48!UBERON:0000033;1.56e-08;50!UBERON:0002108;1.76e-08;4!UBERON:0005409;3.26e-08;22!UBERON:0004921;9.68e-08;33!UBERON:0002368;1.33e-07;33!UBERON:0000153;1.41e-07;54!UBERON:0007811;7.91e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.12e-36,11;UBERON:0000019,3.34e-23,20;UBERON:0000047,3.34e-23,20;UBERON:0010312,3.34e-23,20;UBERON:0004088,3.34e-23,20;UBERON:0010230,3.34e-23,20;UBERON:0003072,3.34e-23,20;UBERON:0004128,3.34e-23,20;UBERON:0003071,3.34e-23,20;UBERON:0000970,5.47e-22,21;UBERON:0002104,5.47e-22,21;UBERON:0001456,6.97e-21,22;UBERON:0000020,5.97e-19,24;UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5211 | |||
|TSSclassifier=S | |||
|UniProt=P37059 | |||
|association_with_transcript=131bp_to_ENST00000199936_5end | |||
|coexpression_cluster_id=C1223 | |||
|description=CAGE_peak_5_at_HSD17B2_5end | |||
|id=chr16:82068997..82069008,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.36e-09!6;CL:0002138!1.36e-09!6;CL:0005022!1.36e-09!6;CL:0000066!3.59e-09!254;CL:0000223!5.66e-09!59;CL:0000181!7.82e-08!12;CL:0000417!7.82e-08!12;CL:0000668!7.82e-08!12;CL:0000414!7.82e-08!12;CL:0000412!7.82e-08!12;CL:0000182!7.82e-08!12;CL:0000220!1.80e-07!246;CL:0002321!2.69e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.48e-15;12!CL:0002586;2.34e-14;3!CL:0000064;1.09e-12;3!CL:0000067;1.09e-12;3!CL:0005012;1.09e-12;3!CL:0002304;1.09e-12;3!CL:0000149;7.14e-11;4!CL:0000306;9.67e-10;4!CL:0002222;9.67e-10;4!CL:0002224;9.67e-10;4!CL:0000075;2.98e-08;27!CL:0000147;1.45e-07;14!CL:0002138;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-16,12;CL:0002586,2.40e-14,3;CL:0000064,1.37e-12,3;CL:0000067,1.37e-12,3;CL:0005012,1.37e-12,3;CL:0002304,1.37e-12,3;CL:0000066,3.62e-11,253;CL:0000149,7.26e-11,4;CL:0000306,8.44e-10,4;CL:0002222,8.44e-10,4;CL:0002224,8.44e-10,4;CL:0000223,3.79e-09,58;CL:0000075,2.96e-08,27;CL:0000147,1.41e-07,14;CL:0005020,3.02e-07,6;CL:0002138,3.02e-07,6;CL:0005022,3.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.36e-12;11!UBERON:0009497;1.46e-10;13!CL:0005022;3.15e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@HSD17B2 | |||
}} |
Revision as of 11:45, 11 September 2013
Short description: | p5@HSD17B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HSD17B2_5end |
Coexpression cluster: | C1223_Retinal_tubular_Endothelial_placenta_small_temporal_duodenum |
Association with transcript: | 131bp_to_ENST00000199936_5end |
EntrezGene: | HSD17B2 |
HGNC: | 5211 |
UniProt: | P37059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.93e-16 | 12 |
retinal pigment epithelial cell | 2.40e-14 | 3 |
ciliated cell | 1.37e-12 | 3 |
ciliated epithelial cell | 1.37e-12 | 3 |
multi-ciliated epithelial cell | 1.37e-12 | 3 |
non-pigmented ciliary epithelial cell | 1.37e-12 | 3 |
epithelial cell | 3.62e-11 | 253 |
visual pigment cell | 7.26e-11 | 4 |
crystallin accumulating cell | 8.44e-10 | 4 |
vertebrate lens cell | 8.44e-10 | 4 |
lens epithelial cell | 8.44e-10 | 4 |
endodermal cell | 3.79e-09 | 58 |
columnar/cuboidal epithelial cell | 2.96e-08 | 27 |
pigment cell | 1.41e-07 | 14 |
lymphangioblast | 3.02e-07 | 6 |
endothelial cell of lymphatic vessel | 3.02e-07 | 6 |
vascular lymphangioblast | 3.02e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.