FFCP PHASE1:Hg19::chr17:79061279..79061316,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:79061279..79061316,+|id=chr17:79061279..79061316,+|ontology_enrichment_celltype=CL:0002076!5.46e-18!43;CL:0002368!1.49e-16!13;CL:0000223!8.72e-13!59;CL:0002202!2.86e-09!9;CL:0002632!2.86e-09!9;CL:0002328!2.18e-08!3;CL:0002251!3.39e-07!21|ontology_enrichment_celltype_v019=CL:0000575;3.16e-18;2!CL:0002328;5.84e-13;3!CL:0002159;4.42e-10;14!CL:0000244;1.15e-09;4!CL:0000731;1.15e-09;4!CL:0000312;7.77e-08;5|ontology_enrichment_celltype_v019_2=CL:0000575,2.90e-18,2;CL:0002328,6.20e-13,3;CL:0002159,4.64e-10,14;CL:0000076,8.22e-10,63;CL:0000244,9.85e-10,4;CL:0000731,9.85e-10,4;CL:0000312,8.61e-08,5;CL:0002076,5.15e-07,42|ontology_enrichment_development_v019=UBERON:0009143;7.88e-10;1|ontology_enrichment_disease=DOID:1749!4.67e-15!14|ontology_enrichment_disease_v019=DOID:1749;2.12e-15;14!DOID:3151;3.88e-10;1!DOID:3149;3.88e-10;1|ontology_enrichment_disease_v019_2=DOID:1749,2.26e-15,14;DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1|ontology_enrichment_uberon=UBERON:0001004!3.64e-16!72;UBERON:0000974!1.24e-13!10;UBERON:0000065!2.29e-12!53;UBERON:0003729!5.28e-12!5;UBERON:0007196!4.62e-10!14;UBERON:0001558!4.62e-10!14;UBERON:0003343!6.18e-10!4;UBERON:0004785!6.18e-10!4;UBERON:0004119!8.44e-10!169;UBERON:0000925!8.44e-10!169;UBERON:0006595!8.44e-10!169;UBERON:0005178!7.03e-09!34;UBERON:0002224!7.03e-09!34;UBERON:0005181!1.56e-08!35;UBERON:0004815!2.18e-08!3;UBERON:0002031!2.18e-08!3;UBERON:0000166!1.38e-07!21;UBERON:0001007!5.71e-07!155;UBERON:0001555!5.71e-07!155;UBERON:0007026!5.71e-07!155;UBERON:0000161!9.62e-07!35|ontology_enrichment_uberon_v019=UBERON:0000974;3.32e-23;6!UBERON:0003343;7.01e-20;4!UBERON:0004785;7.01e-20;4!UBERON:0003127;1.37e-18;2!UBERON:0004815;5.84e-13;3!UBERON:0002031;5.84e-13;3!UBERON:0002372;1.89e-10;1!UBERON:0001961;1.89e-10;1!UBERON:0001744;1.89e-10;1!UBERON:0001042;1.89e-10;1!UBERON:0001735;1.89e-10;1!UBERON:0007196;1.07e-09;15!UBERON:0001558;1.07e-09;15!UBERON:0000964;1.39e-09;4!UBERON:0010409;1.39e-09;4!UBERON:0002185;4.01e-08;5!UBERON:0000365;6.65e-08;5!UBERON:0000165;1.07e-07;28!UBERON:0000161;1.58e-07;19!UBERON:0000166;1.58e-07;19!UBERON:0000344;3.71e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.25e-20,4;UBERON:0004785,7.25e-20,4;UBERON:0003127,1.10e-18,2;UBERON:0000974,5.29e-14,10;UBERON:0004815,6.20e-13,3;UBERON:0002031,6.20e-13,3;UBERON:0002372,1.98e-10,1;UBERON:0001961,1.98e-10,1;UBERON:0001744,1.98e-10,1;UBERON:0001735,1.98e-10,1;UBERON:0001004,2.46e-10,74;UBERON:0000166,7.64e-10,22;UBERON:0007196,1.03e-09,15;UBERON:0001558,1.03e-09,15;UBERON:0000964,1.34e-09,4;UBERON:0010409,1.34e-09,4;UBERON:0004348,1.34e-09,4;UBERON:0005427,1.34e-09,4;UBERON:0002185,4.15e-08,5;UBERON:0001444,5.53e-08,49;UBERON:0000153,5.60e-08,62;UBERON:0007811,5.60e-08,62;UBERON:0000365,5.89e-08,5;UBERON:0000165,2.01e-07,29;UBERON:0000930,2.01e-07,29;UBERON:0000065,2.52e-07,54;UBERON:0003102,3.02e-07,99;UBERON:0000344,3.77e-07,20;UBERON:0004119,5.62e-07,160;UBERON:0000925,5.62e-07,160;UBERON:0006595,5.62e-07,160;UBERON:0000033,6.87e-07,56;UBERON:0005910,9.15e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,3.0120591877825,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,2.24803506515239,1.00528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.382838137483752,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0.564862804660675,0,1.68471475667626,3.10401107475673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04828206913899,0.508507300585533,0,0,0,0,0,0.2411928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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:79061279..79061316,+ | |||
|id=chr17:79061279..79061316,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.46e-18!43;CL:0002368!1.49e-16!13;CL:0000223!8.72e-13!59;CL:0002202!2.86e-09!9;CL:0002632!2.86e-09!9;CL:0002328!2.18e-08!3;CL:0002251!3.39e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.16e-18;2!CL:0002328;5.84e-13;3!CL:0002159;4.42e-10;14!CL:0000244;1.15e-09;4!CL:0000731;1.15e-09;4!CL:0000312;7.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.90e-18,2;CL:0002328,6.20e-13,3;CL:0002159,4.64e-10,14;CL:0000076,8.22e-10,63;CL:0000244,9.85e-10,4;CL:0000731,9.85e-10,4;CL:0000312,8.61e-08,5;CL:0002076,5.15e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.88e-10;1 | |||
|ontology_enrichment_disease=DOID:1749!4.67e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.12e-15;14!DOID:3151;3.88e-10;1!DOID:3149;3.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.26e-15,14;DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.64e-16!72;UBERON:0000974!1.24e-13!10;UBERON:0000065!2.29e-12!53;UBERON:0003729!5.28e-12!5;UBERON:0007196!4.62e-10!14;UBERON:0001558!4.62e-10!14;UBERON:0003343!6.18e-10!4;UBERON:0004785!6.18e-10!4;UBERON:0004119!8.44e-10!169;UBERON:0000925!8.44e-10!169;UBERON:0006595!8.44e-10!169;UBERON:0005178!7.03e-09!34;UBERON:0002224!7.03e-09!34;UBERON:0005181!1.56e-08!35;UBERON:0004815!2.18e-08!3;UBERON:0002031!2.18e-08!3;UBERON:0000166!1.38e-07!21;UBERON:0001007!5.71e-07!155;UBERON:0001555!5.71e-07!155;UBERON:0007026!5.71e-07!155;UBERON:0000161!9.62e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;3.32e-23;6!UBERON:0003343;7.01e-20;4!UBERON:0004785;7.01e-20;4!UBERON:0003127;1.37e-18;2!UBERON:0004815;5.84e-13;3!UBERON:0002031;5.84e-13;3!UBERON:0002372;1.89e-10;1!UBERON:0001961;1.89e-10;1!UBERON:0001744;1.89e-10;1!UBERON:0001042;1.89e-10;1!UBERON:0001735;1.89e-10;1!UBERON:0007196;1.07e-09;15!UBERON:0001558;1.07e-09;15!UBERON:0000964;1.39e-09;4!UBERON:0010409;1.39e-09;4!UBERON:0002185;4.01e-08;5!UBERON:0000365;6.65e-08;5!UBERON:0000165;1.07e-07;28!UBERON:0000161;1.58e-07;19!UBERON:0000166;1.58e-07;19!UBERON:0000344;3.71e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,7.25e-20,4;UBERON:0004785,7.25e-20,4;UBERON:0003127,1.10e-18,2;UBERON:0000974,5.29e-14,10;UBERON:0004815,6.20e-13,3;UBERON:0002031,6.20e-13,3;UBERON:0002372,1.98e-10,1;UBERON:0001961,1.98e-10,1;UBERON:0001744,1.98e-10,1;UBERON:0001735,1.98e-10,1;UBERON:0001004,2.46e-10,74;UBERON:0000166,7.64e-10,22;UBERON:0007196,1.03e-09,15;UBERON:0001558,1.03e-09,15;UBERON:0000964,1.34e-09,4;UBERON:0010409,1.34e-09,4;UBERON:0004348,1.34e-09,4;UBERON:0005427,1.34e-09,4;UBERON:0002185,4.15e-08,5;UBERON:0001444,5.53e-08,49;UBERON:0000153,5.60e-08,62;UBERON:0007811,5.60e-08,62;UBERON:0000365,5.89e-08,5;UBERON:0000165,2.01e-07,29;UBERON:0000930,2.01e-07,29;UBERON:0000065,2.52e-07,54;UBERON:0003102,3.02e-07,99;UBERON:0000344,3.77e-07,20;UBERON:0004119,5.62e-07,160;UBERON:0000925,5.62e-07,160;UBERON:0006595,5.62e-07,160;UBERON:0000033,6.87e-07,56;UBERON:0005910,9.15e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,3.0120591877825,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,2.24803506515239,1.00528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.382838137483752,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0.564862804660675,0,1.68471475667626,3.10401107475673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04828206913899,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.587954384486266,0.34823682632161,0,0,0,0,0,1.45483524732629,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.85381197895741,0,0,0,0,0.14405479798815,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.314408610199332,0.828478110694391,0,0,0,3.19170628885091,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,1.47221577751538,1.41563668017288,2.20114318226015,0.231051332300676,0,0,0,0.752103283492572,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0.892769693028288,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.13233981900981,0.714193294391221,0.322944549180031,0.124149428591716,0,0,0,6.96693593270276,0,6.73520530145875,11.3321084520429,1.66330178273007,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:79061279..79061316,+ | |||
}} |
Revision as of 16:22, 11 September 2013
Short description: | p@chr17:79061279..79061316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79061279..79061316, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.90e-18 | 2 |
bronchial epithelial cell | 6.20e-13 | 3 |
general ecto-epithelial cell | 4.64e-10 | 14 |
squamous epithelial cell | 8.22e-10 | 63 |
transitional epithelial cell | 9.85e-10 | 4 |
urothelial cell | 9.85e-10 | 4 |
keratinocyte | 8.61e-08 | 5 |
endo-epithelial cell | 5.15e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 7.25e-20 | 4 |
respiratory system mucosa | 7.25e-20 | 4 |
open tracheal system trachea | 1.10e-18 | 2 |
neck | 5.29e-14 | 10 |
lower respiratory tract epithelium | 6.20e-13 | 3 |
epithelium of bronchus | 6.20e-13 | 3 |
tonsil | 1.98e-10 | 1 |
mucosa-associated lymphoid tissue | 1.98e-10 | 1 |
lymphoid tissue | 1.98e-10 | 1 |
tonsillar ring | 1.98e-10 | 1 |
respiratory system | 2.46e-10 | 74 |
oral opening | 7.64e-10 | 22 |
tracheobronchial tree | 1.03e-09 | 15 |
lower respiratory tract | 1.03e-09 | 15 |
cornea | 1.34e-09 | 4 |
eye surface | 1.34e-09 | 4 |
optic eminence | 1.34e-09 | 4 |
corneal primordium | 1.34e-09 | 4 |
bronchus | 4.15e-08 | 5 |
subdivision of head | 5.53e-08 | 49 |
anterior region of body | 5.60e-08 | 62 |
craniocervical region | 5.60e-08 | 62 |
urothelium | 5.89e-08 | 5 |
mouth | 2.01e-07 | 29 |
stomodeum | 2.01e-07 | 29 |
respiratory tract | 2.52e-07 | 54 |
surface structure | 3.02e-07 | 99 |
mucosa | 3.77e-07 | 20 |
endoderm-derived structure | 5.62e-07 | 160 |
endoderm | 5.62e-07 | 160 |
presumptive endoderm | 5.62e-07 | 160 |
head | 6.87e-07 | 56 |
transitional epithelium | 9.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.26e-15 | 14 |
skin squamous cell carcinoma | 3.10e-10 | 1 |
keratoacanthoma | 3.10e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.