FFCP PHASE1:Hg19::chr18:21693261..21693272,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=125488|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26595|TSSclassifier=S|UniProt=G3V1P2|association_with_transcript=-44bp_to_ENST00000540918_5end|coexpression_cluster_id=C5|description=CAGE_peak_17_at_TTC39C_5end|id=chr18:21693261..21693272,+|ontology_enrichment_celltype=CL:0000181!7.24e-30!12;CL:0000417!7.24e-30!12;CL:0000668!7.24e-30!12;CL:0000414!7.24e-30!12;CL:0000412!7.24e-30!12;CL:0000182!7.24e-30!12;CL:0002553!1.97e-11!1;CL:0000223!7.08e-10!59|ontology_enrichment_celltype_v019=CL:0000182;2.19e-19;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-19,12|ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13|ontology_enrichment_disease=DOID:178!4.01e-11!1;DOID:326!4.01e-11!1;DOID:3978!4.01e-11!1;DOID:3394!4.01e-11!1;DOID:5844!4.01e-11!1|ontology_enrichment_disease_v019=DOID:3307;1.55e-13;2|ontology_enrichment_disease_v019_2=DOID:3307,1.55e-13,2|ontology_enrichment_uberon=UBERON:0002107!3.74e-33!19;UBERON:0006925!3.74e-33!19;UBERON:0008836!3.74e-33!19;UBERON:0009497!1.54e-31!25;UBERON:0000015!1.54e-31!25;UBERON:0002423!1.54e-31!25;UBERON:0006235!1.54e-31!25;UBERON:0004161!1.54e-31!25;UBERON:0008835!1.61e-28!22;UBERON:0003894!1.61e-28!22;UBERON:0009854!3.04e-27!23;UBERON:0007499!5.39e-25!25;UBERON:0005057!5.32e-24!26;UBERON:0009856!5.32e-24!26;UBERON:0003929!8.27e-21!54;UBERON:0002365!5.49e-20!31;UBERON:0002330!5.49e-20!31;UBERON:0002368!1.34e-17!35;UBERON:0005911!9.02e-16!82;UBERON:0005172!1.04e-13!55;UBERON:0005173!1.04e-13!55;UBERON:0000949!1.76e-13!45;UBERON:0002530!1.21e-12!59;UBERON:0002417!3.04e-12!61;UBERON:0000916!3.04e-12!61;UBERON:0005177!5.14e-08!107;UBERON:0000077!1.02e-07!130;UBERON:0004921!1.08e-07!129;UBERON:0004185!1.08e-07!129;UBERON:0009569!1.64e-07!113;UBERON:0001007!2.08e-07!155;UBERON:0001555!2.08e-07!155;UBERON:0007026!2.08e-07!155;UBERON:0001041!3.63e-07!98;UBERON:0000490!3.84e-07!138;UBERON:0005256!7.70e-07!143|ontology_enrichment_uberon_v019=UBERON:0002107;6.84e-33;19!UBERON:0006925;6.84e-33;19!UBERON:0002423;4.18e-25;25!UBERON:0002365;2.90e-20;31!UBERON:0002330;2.90e-20;31!UBERON:0002368;1.56e-17;33!UBERON:0000949;9.93e-13;43!UBERON:0005172;3.30e-09;52!UBERON:0005173;3.30e-09;52!UBERON:0002417;3.64e-07;58!UBERON:0000916;3.64e-07;58!UBERON:0002530;9.45e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005911,7.71e-08,82;UBERON:0001041,2.13e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,7.86261773342101,15.9513274803979,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.494495150286999,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81899965643152,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=125488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |||
|TSSclassifier=S | |||
|UniProt=G3V1P2 | |||
|association_with_transcript=-44bp_to_ENST00000540918_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_17_at_TTC39C_5end | |||
|id=chr18:21693261..21693272,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.24e-30!12;CL:0000417!7.24e-30!12;CL:0000668!7.24e-30!12;CL:0000414!7.24e-30!12;CL:0000412!7.24e-30!12;CL:0000182!7.24e-30!12;CL:0002553!1.97e-11!1;CL:0000223!7.08e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.19e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13 | |||
|ontology_enrichment_disease=DOID:178!4.01e-11!1;DOID:326!4.01e-11!1;DOID:3978!4.01e-11!1;DOID:3394!4.01e-11!1;DOID:5844!4.01e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3307;1.55e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0002107!3.74e-33!19;UBERON:0006925!3.74e-33!19;UBERON:0008836!3.74e-33!19;UBERON:0009497!1.54e-31!25;UBERON:0000015!1.54e-31!25;UBERON:0002423!1.54e-31!25;UBERON:0006235!1.54e-31!25;UBERON:0004161!1.54e-31!25;UBERON:0008835!1.61e-28!22;UBERON:0003894!1.61e-28!22;UBERON:0009854!3.04e-27!23;UBERON:0007499!5.39e-25!25;UBERON:0005057!5.32e-24!26;UBERON:0009856!5.32e-24!26;UBERON:0003929!8.27e-21!54;UBERON:0002365!5.49e-20!31;UBERON:0002330!5.49e-20!31;UBERON:0002368!1.34e-17!35;UBERON:0005911!9.02e-16!82;UBERON:0005172!1.04e-13!55;UBERON:0005173!1.04e-13!55;UBERON:0000949!1.76e-13!45;UBERON:0002530!1.21e-12!59;UBERON:0002417!3.04e-12!61;UBERON:0000916!3.04e-12!61;UBERON:0005177!5.14e-08!107;UBERON:0000077!1.02e-07!130;UBERON:0004921!1.08e-07!129;UBERON:0004185!1.08e-07!129;UBERON:0009569!1.64e-07!113;UBERON:0001007!2.08e-07!155;UBERON:0001555!2.08e-07!155;UBERON:0007026!2.08e-07!155;UBERON:0001041!3.63e-07!98;UBERON:0000490!3.84e-07!138;UBERON:0005256!7.70e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.84e-33;19!UBERON:0006925;6.84e-33;19!UBERON:0002423;4.18e-25;25!UBERON:0002365;2.90e-20;31!UBERON:0002330;2.90e-20;31!UBERON:0002368;1.56e-17;33!UBERON:0000949;9.93e-13;43!UBERON:0005172;3.30e-09;52!UBERON:0005173;3.30e-09;52!UBERON:0002417;3.64e-07;58!UBERON:0000916;3.64e-07;58!UBERON:0002530;9.45e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005911,7.71e-08,82;UBERON:0001041,2.13e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,7.86261773342101,15.9513274803979,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.494495150286999,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81899965643152,9.27548222385549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p17@TTC39C | |||
}} |
Revision as of 17:02, 11 September 2013
Short description: | p17@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_TTC39C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -44bp_to_ENST00000540918_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | G3V1P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.12e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
endo-epithelium | 7.71e-08 | 82 |
foregut | 2.13e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.55e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.