FFCP PHASE1:Hg19::chr18:5895495..5895534,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:5895495..5895534,-|id=chr18:5895495..5895534,-|ontology_enrichment_celltype=CL:0002319!7.87e-13!25;CL:0000047!4.11e-11!8;CL:0000133!5.19e-10!59;CL:0000540!1.55e-08!6;CL:0000031!1.55e-08!6;CL:0000404!1.55e-08!6;CL:0000128!2.11e-08!7;CL:0000126!2.11e-08!7;CL:0000127!2.11e-08!7;CL:0002453!2.11e-08!7;CL:0002322!4.95e-07!5;CL:0000221!5.28e-07!71|ontology_enrichment_celltype_v019=CL:0000047;3.95e-11;2!CL:0002367;3.95e-11;2!CL:0002322;6.27e-09;5!CL:0002319;8.00e-08;25!CL:0000540;1.11e-07;6!CL:0000404;1.11e-07;6|ontology_enrichment_celltype_v019_2=CL:0000047,2.88e-15,8;CL:0002367,5.21e-11,2;CL:0002322,6.55e-09,5;CL:0002319,7.45e-08,25;CL:0000540,7.84e-08,6;CL:0000031,7.84e-08,6;CL:0000404,7.84e-08,6|ontology_enrichment_development_v019=UBERON:0003918;6.35e-08;10!UBERON:0007687;6.35e-08;10!CL:0000031;1.11e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.72e-31!82;UBERON:0005743!2.59e-30!86;UBERON:0000073!2.60e-28!94;UBERON:0001016!2.60e-28!94;UBERON:0003075!8.61e-24!86;UBERON:0007284!8.61e-24!86;UBERON:0001049!1.09e-23!57;UBERON:0005068!1.09e-23!57;UBERON:0006241!1.09e-23!57;UBERON:0007135!1.09e-23!57;UBERON:0002346!2.74e-23!90;UBERON:0000955!2.55e-21!69;UBERON:0006238!2.55e-21!69;UBERON:0002616!4.18e-21!59;UBERON:0002020!2.73e-20!34;UBERON:0003528!2.73e-20!34;UBERON:0004121!9.57e-20!169;UBERON:0000924!1.10e-19!173;UBERON:0006601!1.10e-19!173;UBERON:0002791!1.57e-19!33;UBERON:0003056!1.81e-19!61;UBERON:0003080!3.89e-19!42;UBERON:0001893!1.04e-18!34;UBERON:0002780!3.22e-18!41;UBERON:0001890!3.22e-18!41;UBERON:0006240!3.22e-18!41;UBERON:0001869!2.40e-17!32;UBERON:0007023!1.67e-16!115;UBERON:0000033!1.43e-15!123;UBERON:0000153!9.68e-15!129;UBERON:0007811!9.68e-15!129;UBERON:0000956!6.04e-13!25;UBERON:0000203!6.04e-13!25;UBERON:0002619!3.57e-10!22;UBERON:0001950!6.15e-10!20;UBERON:0002308!2.84e-09!9;UBERON:0000125!2.84e-09!9;UBERON:0000922!6.34e-09!612;UBERON:0000477!1.02e-08!286;UBERON:0000025!1.45e-08!194;UBERON:0009663!1.03e-07!7;UBERON:0002420!1.24e-07!9;UBERON:0007245!1.24e-07!9;UBERON:0010009!1.24e-07!9;UBERON:0010011!1.24e-07!9;UBERON:0000454!1.24e-07!9;UBERON:0004111!4.07e-07!241;UBERON:0002050!9.95e-07!605;UBERON:0005423!9.95e-07!605|ontology_enrichment_uberon_v019=UBERON:0005969;3.95e-11;2!UBERON:0003956;3.95e-11;2!UBERON:0000922;3.27e-10;49|ontology_enrichment_uberon_v019_2=UBERON:0005969,5.21e-11,2;UBERON:0003956,5.21e-11,2|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,0,0,0,0.247532705920093,0,0,0,0,0,0.738726348460727,1.22400414746552,0.313454721478088,0.572471974262113,1.36874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.397589304964456,0.813357600086629,1.45125477021519,1.51392510525377,1.45990943630332,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.3032332212413,0,0,1.39116485970092,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,3.90419561572865,1.54657762555539,1.84267891867784,2.55175500661265,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.55668090191184,0.907604499126468,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,3.03578539012572,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0.994147647766298,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,3.99227596002388,0,0,0.724999575434793,0,0,0.236387681767936,0,0.583209226766509,0,0.885741385813839,0.482385754501632,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,2.07564790076435,0.617819694732514,0.522109747527277,0.337005664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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:5895495..5895534,- | |||
|id=chr18:5895495..5895534,- | |||
|ontology_enrichment_celltype=CL:0002319!7.87e-13!25;CL:0000047!4.11e-11!8;CL:0000133!5.19e-10!59;CL:0000540!1.55e-08!6;CL:0000031!1.55e-08!6;CL:0000404!1.55e-08!6;CL:0000128!2.11e-08!7;CL:0000126!2.11e-08!7;CL:0000127!2.11e-08!7;CL:0002453!2.11e-08!7;CL:0002322!4.95e-07!5;CL:0000221!5.28e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.95e-11;2!CL:0002367;3.95e-11;2!CL:0002322;6.27e-09;5!CL:0002319;8.00e-08;25!CL:0000540;1.11e-07;6!CL:0000404;1.11e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.88e-15,8;CL:0002367,5.21e-11,2;CL:0002322,6.55e-09,5;CL:0002319,7.45e-08,25;CL:0000540,7.84e-08,6;CL:0000031,7.84e-08,6;CL:0000404,7.84e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.35e-08;10!UBERON:0007687;6.35e-08;10!CL:0000031;1.11e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.72e-31!82;UBERON:0005743!2.59e-30!86;UBERON:0000073!2.60e-28!94;UBERON:0001016!2.60e-28!94;UBERON:0003075!8.61e-24!86;UBERON:0007284!8.61e-24!86;UBERON:0001049!1.09e-23!57;UBERON:0005068!1.09e-23!57;UBERON:0006241!1.09e-23!57;UBERON:0007135!1.09e-23!57;UBERON:0002346!2.74e-23!90;UBERON:0000955!2.55e-21!69;UBERON:0006238!2.55e-21!69;UBERON:0002616!4.18e-21!59;UBERON:0002020!2.73e-20!34;UBERON:0003528!2.73e-20!34;UBERON:0004121!9.57e-20!169;UBERON:0000924!1.10e-19!173;UBERON:0006601!1.10e-19!173;UBERON:0002791!1.57e-19!33;UBERON:0003056!1.81e-19!61;UBERON:0003080!3.89e-19!42;UBERON:0001893!1.04e-18!34;UBERON:0002780!3.22e-18!41;UBERON:0001890!3.22e-18!41;UBERON:0006240!3.22e-18!41;UBERON:0001869!2.40e-17!32;UBERON:0007023!1.67e-16!115;UBERON:0000033!1.43e-15!123;UBERON:0000153!9.68e-15!129;UBERON:0007811!9.68e-15!129;UBERON:0000956!6.04e-13!25;UBERON:0000203!6.04e-13!25;UBERON:0002619!3.57e-10!22;UBERON:0001950!6.15e-10!20;UBERON:0002308!2.84e-09!9;UBERON:0000125!2.84e-09!9;UBERON:0000922!6.34e-09!612;UBERON:0000477!1.02e-08!286;UBERON:0000025!1.45e-08!194;UBERON:0009663!1.03e-07!7;UBERON:0002420!1.24e-07!9;UBERON:0007245!1.24e-07!9;UBERON:0010009!1.24e-07!9;UBERON:0010011!1.24e-07!9;UBERON:0000454!1.24e-07!9;UBERON:0004111!4.07e-07!241;UBERON:0002050!9.95e-07!605;UBERON:0005423!9.95e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;3.95e-11;2!UBERON:0003956;3.95e-11;2!UBERON:0000922;3.27e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,5.21e-11,2;UBERON:0003956,5.21e-11,2 | |||
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|short_description=p@chr18:5895495..5895534,- | |||
}} |
Revision as of 17:56, 11 September 2013
Short description: | p@chr18:5895495..5895534, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:5895495..5895534, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.88e-15 | 8 |
trabecular meshwork cell | 5.21e-11 | 2 |
embryonic stem cell | 6.55e-09 | 5 |
neural cell | 7.45e-08 | 25 |
neuron | 7.84e-08 | 6 |
neuroblast | 7.84e-08 | 6 |
electrically signaling cell | 7.84e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 5.21e-11 | 2 |
aqueous drainage system | 5.21e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.