FFCP PHASE1:Hg19::chr19:8483304..8483326,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51257|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28038|TSSclassifier=S|UniProt=Q9P0N8|association_with_transcript=15bp_to_BC032624_5end|coexpression_cluster_id=C14|description=CAGE_peak_3_at_MARCH2_5end|id=chr19:8483304..8483326,+|ontology_enrichment_celltype=CL:0000764!6.05e-08!2;CL:0000765!6.05e-08!2;CL:0000050!6.05e-08!2;CL:0000038!6.05e-08!2;CL:0000558!6.05e-08!2;CL:0000547!6.05e-08!2;CL:0000549!6.05e-08!2;CL:0000550!6.05e-08!2;CL:0000552!6.05e-08!2|ontology_enrichment_celltype_v019=CL:0000764;7.67e-26;2!CL:0000558;7.67e-26;2|ontology_enrichment_celltype_v019_2=CL:0000764,7.67e-26,2;CL:0000765,7.67e-26,2;CL:0000050,7.67e-26,2;CL:0000038,7.67e-26,2;CL:0000558,7.67e-26,2;CL:0000547,7.67e-26,2;CL:0000549,7.67e-26,2;CL:0000550,7.67e-26,2;CL:0000552,7.67e-26,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.63e-21!15;UBERON:0000179!3.63e-21!15;UBERON:0000463!3.63e-21!15;UBERON:0007023!4.37e-14!115;UBERON:0002390!1.26e-07!102;UBERON:0003061!1.26e-07!102;UBERON:0002193!2.23e-07!112;UBERON:0003127!7.22e-07!2|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-66;15!UBERON:0000179;1.15e-66;15!UBERON:0000463;1.15e-66;15!UBERON:0002390;3.17e-35;32!UBERON:0002193;1.13e-17;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-66,15;UBERON:0000179,1.15e-66,15;UBERON:0000463,1.15e-66,15;UBERON:0002390,5.75e-14,98;UBERON:0003061,5.75e-14,98;UBERON:0002193,1.47e-12,108;UBERON:0007023,5.47e-12,114;UBERON:0004535,2.55e-10,109;UBERON:0001009,5.20e-10,112;UBERON:0003081,2.69e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49682337822484,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20891481912925,9.15024078587152,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,37.0436754739484,48.936781257112,12.5322381178316,6.19402616190251,4.52498500394814,35.6660321155995,24.8414461129533,19.0350042310625,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2558420511602,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.281951753939561,1.61144719933943,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.31037357147929,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0|short_description=p3@MARCH2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=51257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28038 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0N8 | |||
|association_with_transcript=15bp_to_BC032624_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_MARCH2_5end | |||
|id=chr19:8483304..8483326,+ | |||
|ontology_enrichment_celltype=CL:0000764!6.05e-08!2;CL:0000765!6.05e-08!2;CL:0000050!6.05e-08!2;CL:0000038!6.05e-08!2;CL:0000558!6.05e-08!2;CL:0000547!6.05e-08!2;CL:0000549!6.05e-08!2;CL:0000550!6.05e-08!2;CL:0000552!6.05e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.67e-26;2!CL:0000558;7.67e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.67e-26,2;CL:0000765,7.67e-26,2;CL:0000050,7.67e-26,2;CL:0000038,7.67e-26,2;CL:0000558,7.67e-26,2;CL:0000547,7.67e-26,2;CL:0000549,7.67e-26,2;CL:0000550,7.67e-26,2;CL:0000552,7.67e-26,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.63e-21!15;UBERON:0000179!3.63e-21!15;UBERON:0000463!3.63e-21!15;UBERON:0007023!4.37e-14!115;UBERON:0002390!1.26e-07!102;UBERON:0003061!1.26e-07!102;UBERON:0002193!2.23e-07!112;UBERON:0003127!7.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-66;15!UBERON:0000179;1.15e-66;15!UBERON:0000463;1.15e-66;15!UBERON:0002390;3.17e-35;32!UBERON:0002193;1.13e-17;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-66,15;UBERON:0000179,1.15e-66,15;UBERON:0000463,1.15e-66,15;UBERON:0002390,5.75e-14,98;UBERON:0003061,5.75e-14,98;UBERON:0002193,1.47e-12,108;UBERON:0007023,5.47e-12,114;UBERON:0004535,2.55e-10,109;UBERON:0001009,5.20e-10,112;UBERON:0003081,2.69e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49682337822484,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20891481912925,9.15024078587152,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,37.0436754739484,48.936781257112,12.5322381178316,6.19402616190251,4.52498500394814,35.6660321155995,24.8414461129533,19.0350042310625,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2558420511602,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.281951753939561,1.61144719933943,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.31037357147929,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p3@MARCH2 | |||
}} |
Revision as of 23:01, 11 September 2013
Short description: | p3@MARCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MARCH2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 15bp_to_BC032624_5end |
EntrezGene: | MARCH2 |
HGNC: | 28038 |
UniProt: | Q9P0N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.67e-26 | 2 |
erythroblast | 7.67e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 7.67e-26 | 2 |
erythroid progenitor cell | 7.67e-26 | 2 |
reticulocyte | 7.67e-26 | 2 |
proerythroblast | 7.67e-26 | 2 |
basophilic erythroblast | 7.67e-26 | 2 |
polychromatophilic erythroblast | 7.67e-26 | 2 |
orthochromatic erythroblast | 7.67e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-66 | 15 |
haemolymphatic fluid | 1.15e-66 | 15 |
organism substance | 1.15e-66 | 15 |
hematopoietic system | 5.75e-14 | 98 |
blood island | 5.75e-14 | 98 |
hemolymphoid system | 1.47e-12 | 108 |
adult organism | 5.47e-12 | 114 |
cardiovascular system | 2.55e-10 | 109 |
circulatory system | 5.20e-10 | 112 |
lateral plate mesoderm | 2.69e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.