FFCP PHASE1:Hg19::chr1:207277681..207277700,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=722|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1325|TSSclassifier=S|UniProt=F2Z2V7|association_with_transcript=-22bp_to_ENST00000424088_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_C4BPA_5end|id=chr1:207277681..207277700,+|ontology_enrichment_celltype=CL:0000181!4.05e-14!12;CL:0000417!4.05e-14!12;CL:0000668!4.05e-14!12;CL:0000414!4.05e-14!12;CL:0000412!4.05e-14!12;CL:0000182!4.05e-14!12|ontology_enrichment_celltype_v019=CL:0000182;6.96e-33;12!CL:0000771;8.06e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,7.57e-33,12;CL:0000771,8.06e-07,2|ontology_enrichment_development_v019=UBERON:0004161;7.39e-25;11!UBERON:0009497;4.85e-21;13!UBERON:0001041;2.19e-17;30!UBERON:0003104;8.63e-09;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0008835!1.45e-14!22;UBERON:0003894!1.45e-14!22;UBERON:0002107!3.97e-14!19;UBERON:0006925!3.97e-14!19;UBERON:0008836!3.97e-14!19;UBERON:0009854!7.72e-14!23;UBERON:0007499!1.47e-12!25;UBERON:0009497!1.47e-12!25;UBERON:0000015!1.47e-12!25;UBERON:0002423!1.47e-12!25;UBERON:0006235!1.47e-12!25;UBERON:0004161!1.47e-12!25;UBERON:0005057!4.00e-12!26;UBERON:0009856!5.38e-12!26;UBERON:0004921!1.74e-11!129;UBERON:0004185!1.74e-11!129;UBERON:0001041!1.46e-10!98;UBERON:0000077!2.06e-10!130;UBERON:0000949!2.63e-10!45;UBERON:0002368!4.78e-10!35;UBERON:0003929!1.51e-09!54;UBERON:0005911!1.76e-09!82;UBERON:0001007!2.23e-09!155;UBERON:0001555!2.23e-09!155;UBERON:0007026!2.23e-09!155;UBERON:0005177!4.17e-09!107;UBERON:0004119!7.00e-09!169;UBERON:0000925!7.00e-09!169;UBERON:0006595!7.00e-09!169;UBERON:0002365!5.77e-08!31;UBERON:0002330!5.77e-08!31;UBERON:0005172!6.27e-08!55;UBERON:0005173!6.27e-08!55;UBERON:0000466!4.97e-07!126;UBERON:0002417!7.07e-07!61;UBERON:0000916!7.07e-07!61;UBERON:0007023!7.28e-07!115|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-36;19!UBERON:0006925;1.58e-36;19!UBERON:0002423;1.39e-27;25!UBERON:0002365;2.76e-21;31!UBERON:0002330;2.76e-21;31!UBERON:0002368;9.07e-19;33!UBERON:0000949;9.07e-14;43!UBERON:0002171;1.57e-12;1!UBERON:0006518;1.57e-12;1!UBERON:0008949;1.57e-12;1!UBERON:0000101;1.57e-12;1!UBERON:0002167;1.57e-12;1!UBERON:0005172;2.58e-08;52!UBERON:0005173;2.58e-08;52!UBERON:0002417;2.48e-07;58!UBERON:0000916;2.48e-07;58!UBERON:0002530;3.13e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.70e-36,19;UBERON:0006925,1.70e-36,19;UBERON:0008836,1.70e-36,19;UBERON:0008835,2.02e-31,22;UBERON:0003894,2.02e-31,22;UBERON:0009854,5.06e-30,23;UBERON:0007499,1.47e-27,25;UBERON:0009497,1.47e-27,25;UBERON:0000015,1.47e-27,25;UBERON:0002423,1.47e-27,25;UBERON:0006235,1.47e-27,25;UBERON:0004161,1.47e-27,25;UBERON:0009856,1.80e-26,26;UBERON:0002365,4.48e-22,31;UBERON:0002330,4.48e-22,31;UBERON:0002368,1.85e-19,35;UBERON:0000949,5.99e-15,45;UBERON:0002171,1.57e-12,1;UBERON:0006518,1.57e-12,1;UBERON:0008949,1.57e-12,1;UBERON:0000101,1.57e-12,1;UBERON:0002167,1.57e-12,1;UBERON:0003929,2.60e-12,54;UBERON:0005172,2.60e-12,54;UBERON:0005173,2.60e-12,54;UBERON:0005911,2.96e-12,82;UBERON:0001041,1.79e-11,87;UBERON:0002530,3.41e-11,59;UBERON:0002417,5.43e-11,60;UBERON:0000916,5.43e-11,60;UBERON:0005177,1.07e-09,101;UBERON:0009569,1.31e-08,112;UBERON:0004921,5.06e-08,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,0,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84622579341537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,0,457.585675706809,291.899683353255,350.338414662073,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,86.2453267491435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.6456554571552,0,0,0,0,0,0,0,1.42939065274673,1.64544909234478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |||
|TSSclassifier=S | |||
|UniProt=F2Z2V7 | |||
|association_with_transcript=-22bp_to_ENST00000424088_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_C4BPA_5end | |||
|id=chr1:207277681..207277700,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.05e-14!12;CL:0000417!4.05e-14!12;CL:0000668!4.05e-14!12;CL:0000414!4.05e-14!12;CL:0000412!4.05e-14!12;CL:0000182!4.05e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.96e-33;12!CL:0000771;8.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.57e-33,12;CL:0000771,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.39e-25;11!UBERON:0009497;4.85e-21;13!UBERON:0001041;2.19e-17;30!UBERON:0003104;8.63e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!1.45e-14!22;UBERON:0003894!1.45e-14!22;UBERON:0002107!3.97e-14!19;UBERON:0006925!3.97e-14!19;UBERON:0008836!3.97e-14!19;UBERON:0009854!7.72e-14!23;UBERON:0007499!1.47e-12!25;UBERON:0009497!1.47e-12!25;UBERON:0000015!1.47e-12!25;UBERON:0002423!1.47e-12!25;UBERON:0006235!1.47e-12!25;UBERON:0004161!1.47e-12!25;UBERON:0005057!4.00e-12!26;UBERON:0009856!5.38e-12!26;UBERON:0004921!1.74e-11!129;UBERON:0004185!1.74e-11!129;UBERON:0001041!1.46e-10!98;UBERON:0000077!2.06e-10!130;UBERON:0000949!2.63e-10!45;UBERON:0002368!4.78e-10!35;UBERON:0003929!1.51e-09!54;UBERON:0005911!1.76e-09!82;UBERON:0001007!2.23e-09!155;UBERON:0001555!2.23e-09!155;UBERON:0007026!2.23e-09!155;UBERON:0005177!4.17e-09!107;UBERON:0004119!7.00e-09!169;UBERON:0000925!7.00e-09!169;UBERON:0006595!7.00e-09!169;UBERON:0002365!5.77e-08!31;UBERON:0002330!5.77e-08!31;UBERON:0005172!6.27e-08!55;UBERON:0005173!6.27e-08!55;UBERON:0000466!4.97e-07!126;UBERON:0002417!7.07e-07!61;UBERON:0000916!7.07e-07!61;UBERON:0007023!7.28e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-36;19!UBERON:0006925;1.58e-36;19!UBERON:0002423;1.39e-27;25!UBERON:0002365;2.76e-21;31!UBERON:0002330;2.76e-21;31!UBERON:0002368;9.07e-19;33!UBERON:0000949;9.07e-14;43!UBERON:0002171;1.57e-12;1!UBERON:0006518;1.57e-12;1!UBERON:0008949;1.57e-12;1!UBERON:0000101;1.57e-12;1!UBERON:0002167;1.57e-12;1!UBERON:0005172;2.58e-08;52!UBERON:0005173;2.58e-08;52!UBERON:0002417;2.48e-07;58!UBERON:0000916;2.48e-07;58!UBERON:0002530;3.13e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.70e-36,19;UBERON:0006925,1.70e-36,19;UBERON:0008836,1.70e-36,19;UBERON:0008835,2.02e-31,22;UBERON:0003894,2.02e-31,22;UBERON:0009854,5.06e-30,23;UBERON:0007499,1.47e-27,25;UBERON:0009497,1.47e-27,25;UBERON:0000015,1.47e-27,25;UBERON:0002423,1.47e-27,25;UBERON:0006235,1.47e-27,25;UBERON:0004161,1.47e-27,25;UBERON:0009856,1.80e-26,26;UBERON:0002365,4.48e-22,31;UBERON:0002330,4.48e-22,31;UBERON:0002368,1.85e-19,35;UBERON:0000949,5.99e-15,45;UBERON:0002171,1.57e-12,1;UBERON:0006518,1.57e-12,1;UBERON:0008949,1.57e-12,1;UBERON:0000101,1.57e-12,1;UBERON:0002167,1.57e-12,1;UBERON:0003929,2.60e-12,54;UBERON:0005172,2.60e-12,54;UBERON:0005173,2.60e-12,54;UBERON:0005911,2.96e-12,82;UBERON:0001041,1.79e-11,87;UBERON:0002530,3.41e-11,59;UBERON:0002417,5.43e-11,60;UBERON:0000916,5.43e-11,60;UBERON:0005177,1.07e-09,101;UBERON:0009569,1.31e-08,112;UBERON:0004921,5.06e-08,118 | |||
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|short_description=p3@C4BPA | |||
}} |
Revision as of 03:14, 12 September 2013
Short description: | p3@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -22bp_to_ENST00000424088_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | F2Z2V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.57e-33 | 12 |
eosinophil | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.70e-36 | 19 |
digestive gland | 1.70e-36 | 19 |
liver bud | 1.70e-36 | 19 |
hepatic diverticulum | 2.02e-31 | 22 |
liver primordium | 2.02e-31 | 22 |
digestive tract diverticulum | 5.06e-30 | 23 |
epithelial sac | 1.47e-27 | 25 |
epithelium of foregut-midgut junction | 1.47e-27 | 25 |
anatomical boundary | 1.47e-27 | 25 |
hepatobiliary system | 1.47e-27 | 25 |
foregut-midgut junction | 1.47e-27 | 25 |
septum transversum | 1.47e-27 | 25 |
sac | 1.80e-26 | 26 |
exocrine gland | 4.48e-22 | 31 |
exocrine system | 4.48e-22 | 31 |
endocrine gland | 1.85e-19 | 35 |
endocrine system | 5.99e-15 | 45 |
lower lobe of right lung | 1.57e-12 | 1 |
right lung lobe | 1.57e-12 | 1 |
lower lobe of lung | 1.57e-12 | 1 |
lobe of lung | 1.57e-12 | 1 |
right lung | 1.57e-12 | 1 |
gut epithelium | 2.60e-12 | 54 |
abdomen element | 2.60e-12 | 54 |
abdominal segment element | 2.60e-12 | 54 |
endo-epithelium | 2.96e-12 | 82 |
foregut | 1.79e-11 | 87 |
gland | 3.41e-11 | 59 |
abdominal segment of trunk | 5.43e-11 | 60 |
abdomen | 5.43e-11 | 60 |
trunk region element | 1.07e-09 | 101 |
subdivision of trunk | 1.31e-08 | 112 |
subdivision of digestive tract | 5.06e-08 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.