FFCP PHASE1:Hg19::chr1:245133606..245133639,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84288 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28166 | |||
|TSSclassifier=S | |||
|UniProt=B4DZE9,Q5VUJ9 | |||
|association_with_transcript=0bp_to_ENST00000447569,NM_001143943,NR_026587,NR_026588,uc001ibe.2,uc010pyo.1,uc010pyp.1_5end | |||
|description=CAGE_peak_4_at_EFCAB2_5end | |||
|id=chr1:245133606..245133639,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.25e-10!235;DOID:14566!1.53e-09!239;DOID:8692!2.67e-08!31;DOID:0050686!5.66e-07!137;DOID:1240!7.08e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.29e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.01e-08,31;DOID:162,2.49e-08,235;DOID:14566,1.02e-07,239;DOID:1240,3.88e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.07e-09!82;UBERON:0000073!2.48e-08!94;UBERON:0001016!2.48e-08!94;UBERON:0005743!3.07e-08!86;UBERON:0001049!7.58e-08!57;UBERON:0005068!7.58e-08!57;UBERON:0006241!7.58e-08!57;UBERON:0007135!7.58e-08!57;UBERON:0000955!4.64e-07!69;UBERON:0006238!4.64e-07!69;UBERON:0003080!8.62e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.29e-07;41!UBERON:0001890;2.29e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.43e-09,56;UBERON:0005068,2.43e-09,56;UBERON:0006241,2.43e-09,56;UBERON:0007135,2.43e-09,56;UBERON:0002780,8.81e-09,41;UBERON:0001890,8.81e-09,41;UBERON:0003080,8.81e-09,41;UBERON:0006240,8.81e-09,41;UBERON:0001016,1.80e-08,89;UBERON:0000073,2.57e-08,53;UBERON:0002616,2.57e-08,53;UBERON:0001017,3.42e-08,81;UBERON:0001893,7.81e-08,34;UBERON:0003528,9.68e-08,34;UBERON:0002020,9.68e-08,34;UBERON:0011216,9.69e-08,223;UBERON:0002346,1.37e-07,86;UBERON:0003075,3.22e-07,82;UBERON:0007284,3.22e-07,82;UBERON:0002791,5.68e-07,32;UBERON:0000955,5.87e-07,68;UBERON:0006238,5.87e-07,68;UBERON:0001869,9.35e-07,32 | |||
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| |||
|short_description=p4@EFCAB2 | |||
}} |
Revision as of 04:42, 12 September 2013
Short description: | p4@EFCAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_EFCAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447569, NM_001143943, NR_026587, NR_026588, uc001ibe.2, uc010pyo.1, uc010pyp.1_5end |
EntrezGene: | EFCAB2 |
HGNC: | 28166 |
UniProt: | B4DZE9Q5VUJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.43e-09 | 56 |
neural rod | 2.43e-09 | 56 |
future spinal cord | 2.43e-09 | 56 |
neural keel | 2.43e-09 | 56 |
regional part of forebrain | 8.81e-09 | 41 |
forebrain | 8.81e-09 | 41 |
anterior neural tube | 8.81e-09 | 41 |
future forebrain | 8.81e-09 | 41 |
nervous system | 1.80e-08 | 89 |
regional part of nervous system | 2.57e-08 | 53 |
regional part of brain | 2.57e-08 | 53 |
central nervous system | 3.42e-08 | 81 |
telencephalon | 7.81e-08 | 34 |
brain grey matter | 9.68e-08 | 34 |
gray matter | 9.68e-08 | 34 |
organ system subdivision | 9.69e-08 | 223 |
neurectoderm | 1.37e-07 | 86 |
neural plate | 3.22e-07 | 82 |
presumptive neural plate | 3.22e-07 | 82 |
regional part of telencephalon | 5.68e-07 | 32 |
brain | 5.87e-07 | 68 |
future brain | 5.87e-07 | 68 |
cerebral hemisphere | 9.35e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.01e-08 | 31 |
cancer | 2.49e-08 | 235 |
disease of cellular proliferation | 1.02e-07 | 239 |
leukemia | 3.88e-07 | 39 |
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