FFCP PHASE1:Hg19::chr1:27269555..27269558,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C193|description=CAGE_peak_at_chr1:27269555..27269558,+|id=chr1:27269555..27269558,+|ontology_enrichment_celltype=CL:0000012!1.30e-09!682;CL:0000183!1.77e-09!59;CL:0000548!1.99e-09!679;CL:0000004!1.99e-09!679;CL:0000255!1.99e-09!679;CL:0002371!5.28e-09!591;CL:0000055!7.03e-09!180;CL:0000144!1.20e-08!625;CL:0000187!1.34e-08!54;CL:0000393!4.37e-08!60;CL:0000211!4.37e-08!60;CL:0000222!5.39e-08!119;CL:0000192!7.91e-08!42;CL:0000514!7.91e-08!42;CL:0000680!1.07e-07!57;CL:0000056!1.07e-07!57;CL:0000355!1.07e-07!57;CL:0000003!1.71e-07!722;CL:0000220!1.81e-07!246;CL:0002321!3.02e-07!248|ontology_enrichment_celltype_v019=CL:0002367;6.44e-17;2!CL:0002550;2.54e-09;1!CL:0002591;2.54e-09;1!CL:0002601;2.54e-09;1|ontology_enrichment_celltype_v019_2=CL:0002367,6.47e-17,2;CL:0002550,1.21e-09,1;CL:0002591,3.53e-09,1;CL:0002601,5.28e-09,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3347;2.54e-09;1|ontology_enrichment_disease_v019_2=DOID:3347,2.35e-09,1|ontology_enrichment_uberon=UBERON:0000490!1.44e-09!138;UBERON:0004535!5.31e-08!110;UBERON:0002049!1.67e-07!79;UBERON:0007798!1.67e-07!79;UBERON:0001009!1.88e-07!113;UBERON:0003914!4.68e-07!118|ontology_enrichment_uberon_v019=UBERON:0005969;6.44e-17;2!UBERON:0003956;6.44e-17;2!UBERON:0007195;2.54e-09;1!UBERON:0006876;4.60e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0005969,6.47e-17,2;UBERON:0003956,6.47e-17,2;UBERON:0007195,4.15e-09,1;UBERON:0006876,5.12e-07,11;UBERON:0002049,5.22e-07,78;UBERON:0007798,5.22e-07,78|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.74259811776028,0,0.672325146451775,0,0,0,0.984968464614303,0.408001382488506,0,0.572471974262113,0,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0,0.369754010166788,0.154934401160603,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.661743720148475,0,0.087834785693126,0.0654895377488563,1.82147644146271,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,3.20246987189115,0,0.622422070799533,0,0.163461903113459,0.454072282934794,0,1.87457145467037,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,2.73048408581408,0,0.673344455816265,0,0.277064115484183,0,0,0,0.340296549480063,0,0.427114777637135,0.635795703478686,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.686271241194102,0,2.24803506515239,0,0.185176890317059,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.5867062865676,0,17.8828222925941,0,0.531876233169741,0,1.28603687131071,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.521301686808497,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0.574072240823034,0.182091168006717,0.262248829918848,0,0,1.56869953835371,0,0.105551628892876,0,0,0,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0.219259876645935,0.261435451024901,0.769350375349168,0,0,0,0,0,0,0.650060246036521,0,0.386682873168488,0,0.307007349452259,0,0.537101224341368,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,1.3940745403212,0.308033580176089,0.532306030317022,1.73986598415015,0.18532421910392,0,1.116475108079,0,0,0.511795582622668,0,0.318203247925937,0,1.07923474549989,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.92947049429925,0,0.430234056612155,0.294747123039363,0.35667105148125,1.06428319221179,0.211107635297664,0.329294892959902,1.89736586882858,1.04980416073495,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0.459446800413919,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr1:27269555..27269558,+ | |||
|id=chr1:27269555..27269558,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.30e-09!682;CL:0000183!1.77e-09!59;CL:0000548!1.99e-09!679;CL:0000004!1.99e-09!679;CL:0000255!1.99e-09!679;CL:0002371!5.28e-09!591;CL:0000055!7.03e-09!180;CL:0000144!1.20e-08!625;CL:0000187!1.34e-08!54;CL:0000393!4.37e-08!60;CL:0000211!4.37e-08!60;CL:0000222!5.39e-08!119;CL:0000192!7.91e-08!42;CL:0000514!7.91e-08!42;CL:0000680!1.07e-07!57;CL:0000056!1.07e-07!57;CL:0000355!1.07e-07!57;CL:0000003!1.71e-07!722;CL:0000220!1.81e-07!246;CL:0002321!3.02e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002367;6.44e-17;2!CL:0002550;2.54e-09;1!CL:0002591;2.54e-09;1!CL:0002601;2.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,6.47e-17,2;CL:0002550,1.21e-09,1;CL:0002591,3.53e-09,1;CL:0002601,5.28e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;2.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.35e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000490!1.44e-09!138;UBERON:0004535!5.31e-08!110;UBERON:0002049!1.67e-07!79;UBERON:0007798!1.67e-07!79;UBERON:0001009!1.88e-07!113;UBERON:0003914!4.68e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;6.44e-17;2!UBERON:0003956;6.44e-17;2!UBERON:0007195;2.54e-09;1!UBERON:0006876;4.60e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,6.47e-17,2;UBERON:0003956,6.47e-17,2;UBERON:0007195,4.15e-09,1;UBERON:0006876,5.12e-07,11;UBERON:0002049,5.22e-07,78;UBERON:0007798,5.22e-07,78 | |||
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| |||
|short_description=p@chr1:27269555..27269558,+ | |||
}} |
Revision as of 05:01, 12 September 2013
Short description: | p@chr1:27269555..27269558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:27269555..27269558, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 6.47e-17 | 2 |
fibroblast of the conjuctiva | 1.21e-09 | 1 |
smooth muscle cell of the pulmonary artery | 3.53e-09 | 1 |
uterine smooth muscle cell | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 6.47e-17 | 2 |
aqueous drainage system | 6.47e-17 | 2 |
stroma of bone marrow | 4.15e-09 | 1 |
vasculature of organ | 5.12e-07 | 11 |
vasculature | 5.22e-07 | 78 |
vascular system | 5.22e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.35e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.