FFCP PHASE1:Hg19::chr20:10092229..10092265,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C86|description=CAGE_peak_at_chr20:10092229..10092265,-|id=chr20:10092229..10092265,-|ontology_enrichment_celltype=CL:0002253!2.15e-07!2;CL:0002583!3.70e-07!2|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0002563;5.56e-26;4|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0002563,5.56e-26,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060060!1.82e-13!1;DOID:0060061!1.82e-13!1;DOID:8691!1.82e-13!1;DOID:3119!2.95e-08!14|ontology_enrichment_disease_v019=DOID:0060060;2.55e-98;1!DOID:0060061;2.55e-98;1!DOID:8691;2.55e-98;1!DOID:0060058;3.02e-11;10!DOID:3119;1.86e-08;14|ontology_enrichment_disease_v019_2=DOID:0060060,2.55e-98,1;DOID:0060061,2.55e-98,1;DOID:8691,2.55e-98,1;DOID:0060058,3.02e-11,10;DOID:3119,1.86e-08,14|ontology_enrichment_uberon=UBERON:0000998!2.06e-13!1;UBERON:0006868!2.06e-13!1;UBERON:0002336!9.73e-13!1;UBERON:0001018!9.73e-13!1;UBERON:0002473!9.73e-13!1;UBERON:0005340!9.73e-13!1;UBERON:0002316!9.73e-13!1;UBERON:0003544!9.73e-13!1;UBERON:0001020!9.73e-13!1;UBERON:0005970!9.73e-13!1;UBERON:0002437!9.73e-13!1;UBERON:0002581!1.09e-12!1;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0003080!2.19e-09!42;UBERON:0001049!3.47e-09!57;UBERON:0005068!3.47e-09!57;UBERON:0006241!3.47e-09!57;UBERON:0007135!3.47e-09!57;UBERON:0002616!7.37e-09!59;UBERON:0001894!1.38e-07!7;UBERON:0006222!1.38e-07!7;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0000007!3.28e-07!2;UBERON:0001897!4.69e-07!2;UBERON:0005162!5.28e-07!2;UBERON:0000122!5.28e-07!2|ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0000160;7.18e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0000160,7.18e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7105052279024,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:10092229..10092265,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr20:10092229..10092265,- | |||
|id=chr20:10092229..10092265,- | |||
|ontology_enrichment_celltype=CL:0002253!2.15e-07!2;CL:0002583!3.70e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0002563;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0002563,5.56e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.82e-13!1;DOID:0060061!1.82e-13!1;DOID:8691!1.82e-13!1;DOID:3119!2.95e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.55e-98;1!DOID:0060061;2.55e-98;1!DOID:8691;2.55e-98;1!DOID:0060058;3.02e-11;10!DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.55e-98,1;DOID:0060061,2.55e-98,1;DOID:8691,2.55e-98,1;DOID:0060058,3.02e-11,10;DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000998!2.06e-13!1;UBERON:0006868!2.06e-13!1;UBERON:0002336!9.73e-13!1;UBERON:0001018!9.73e-13!1;UBERON:0002473!9.73e-13!1;UBERON:0005340!9.73e-13!1;UBERON:0002316!9.73e-13!1;UBERON:0003544!9.73e-13!1;UBERON:0001020!9.73e-13!1;UBERON:0005970!9.73e-13!1;UBERON:0002437!9.73e-13!1;UBERON:0002581!1.09e-12!1;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0003080!2.19e-09!42;UBERON:0001049!3.47e-09!57;UBERON:0005068!3.47e-09!57;UBERON:0006241!3.47e-09!57;UBERON:0007135!3.47e-09!57;UBERON:0002616!7.37e-09!59;UBERON:0001894!1.38e-07!7;UBERON:0006222!1.38e-07!7;UBERON:0000955!2.18e-07!69;UBERON:0006238!2.18e-07!69;UBERON:0000007!3.28e-07!2;UBERON:0001897!4.69e-07!2;UBERON:0005162!5.28e-07!2;UBERON:0000122!5.28e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0000160;7.18e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0000160,7.18e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7105052279024,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79982354196902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:10092229..10092265,- | |||
}} |
Revision as of 07:26, 12 September 2013
Short description: | p@chr20:10092229..10092265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:10092229..10092265, - |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.74e-50 | 2 |
intestinal epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.56e-26 | 4 |
intestinal mucosa | 5.56e-26 | 4 |
wall of intestine | 5.56e-26 | 4 |
gastrointestinal system mucosa | 5.56e-26 | 4 |
gastrointestinal system epithelium | 5.56e-26 | 4 |
intestinal epithelium | 5.56e-26 | 4 |
lower digestive tract | 4.21e-21 | 5 |
epithelium of mucosa | 9.39e-14 | 8 |
colon | 2.19e-12 | 9 |
simple columnar epithelium | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.55e-98 | 1 |
cutaneous T cell lymphoma | 2.55e-98 | 1 |
mycosis fungoides | 2.55e-98 | 1 |
lymphoma | 3.02e-11 | 10 |
gastrointestinal system cancer | 1.86e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.