FFCP PHASE1:Hg19::chr20:62173459..62173472,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:62173459..62173472,-|id=chr20:62173459..62173472,-|ontology_enrichment_celltype=CL:0002150!1.03e-09!3;CL:0000861!1.03e-09!3;CL:1000415!1.51e-07!2|ontology_enrichment_celltype_v019=CL:0002535;3.57e-09;2!CL:0000575;7.21e-09;2|ontology_enrichment_celltype_v019_2=CL:0002535,3.43e-09,2;CL:0000575,6.94e-09,2|ontology_enrichment_development_v019=UBERON:0008425;5.11e-17;1!UBERON:0008801;2.08e-16;1|ontology_enrichment_disease=DOID:305!1.28e-13!106;DOID:0050687!3.50e-10!143;DOID:3493!5.47e-08!2|ontology_enrichment_disease_v019=DOID:3493;2.35e-31;2!DOID:3111;8.85e-17;1!DOID:3603;8.85e-17;1!DOID:299;2.60e-15;25!DOID:3119;1.81e-10;14!DOID:4929;7.21e-09;2|ontology_enrichment_disease_v019_2=DOID:3493,1.87e-31,2;DOID:3111,1.21e-16,1;DOID:3603,1.21e-16,1;DOID:299,2.52e-15,25;DOID:305,1.36e-13,106;DOID:3119,1.73e-10,14;DOID:0050687,7.99e-10,143;DOID:4929,6.42e-09,2|ontology_enrichment_uberon=UBERON:0002294!9.17e-12!7;UBERON:0001173!9.17e-12!7;UBERON:0004912!9.17e-12!7;UBERON:0002110!1.98e-10!3;UBERON:0006242!1.98e-10!3;UBERON:0000077!1.31e-08!130;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0001737!2.65e-08!9;UBERON:0008947!1.08e-07!38;UBERON:0003258!1.08e-07!38;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129;UBERON:0003127!2.08e-07!2;UBERON:0004119!2.91e-07!169;UBERON:0000925!2.91e-07!169;UBERON:0006595!2.91e-07!169;UBERON:0000341!4.02e-07!2;UBERON:0001041!6.66e-07!98|ontology_enrichment_uberon_v019=UBERON:0001831;2.08e-16;1!UBERON:0004913;2.08e-16;1!UBERON:0003703;2.08e-16;1!UBERON:0001567;2.08e-16;1!UBERON:0001174;2.08e-16;1!UBERON:0004914;2.08e-16;1!UBERON:0002394;4.87e-16;4!UBERON:0003928;4.87e-16;4!UBERON:0002294;1.41e-09;7!UBERON:0001173;1.41e-09;7!UBERON:0006955;3.57e-09;2!UBERON:0004801;3.57e-09;2!UBERON:0001829;7.21e-09;2!UBERON:0004089;7.21e-09;2!UBERON:0000058;5.76e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.65e-16,1;UBERON:0003703,1.65e-16,1;UBERON:0001174,1.65e-16,1;UBERON:0004914,1.65e-16,1;UBERON:0001831,3.07e-16,1;UBERON:0001567,3.07e-16,1;UBERON:0008801,3.07e-16,1;UBERON:0002394,4.84e-11,6;UBERON:0003928,4.84e-11,6;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0001829,8.74e-09,2;UBERON:0004089,8.74e-09,2;UBERON:0002294,1.17e-07,9;UBERON:0001173,1.17e-07,9;UBERON:0004912,1.17e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0.474541238222193,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03092396566842,0,0,0,1.3480252672099,0,0,0.0986434056369336,0,0,0,0,0,0,4.023159999825,0,0.227586896570999,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.19351266257817,0.219267951258557,0.574808199372465,0,0,0,0,0,0,0.977756913674015,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.47856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65005630761156,1.95068679971631,0,0,0,0,0.2339394634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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:62173459..62173472,- | |||
|id=chr20:62173459..62173472,- | |||
|ontology_enrichment_celltype=CL:0002150!1.03e-09!3;CL:0000861!1.03e-09!3;CL:1000415!1.51e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.57e-09;2!CL:0000575;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.43e-09,2;CL:0000575,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.11e-17;1!UBERON:0008801;2.08e-16;1 | |||
|ontology_enrichment_disease=DOID:305!1.28e-13!106;DOID:0050687!3.50e-10!143;DOID:3493!5.47e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.35e-31;2!DOID:3111;8.85e-17;1!DOID:3603;8.85e-17;1!DOID:299;2.60e-15;25!DOID:3119;1.81e-10;14!DOID:4929;7.21e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.87e-31,2;DOID:3111,1.21e-16,1;DOID:3603,1.21e-16,1;DOID:299,2.52e-15,25;DOID:305,1.36e-13,106;DOID:3119,1.73e-10,14;DOID:0050687,7.99e-10,143;DOID:4929,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!9.17e-12!7;UBERON:0001173!9.17e-12!7;UBERON:0004912!9.17e-12!7;UBERON:0002110!1.98e-10!3;UBERON:0006242!1.98e-10!3;UBERON:0000077!1.31e-08!130;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0001737!2.65e-08!9;UBERON:0008947!1.08e-07!38;UBERON:0003258!1.08e-07!38;UBERON:0004921!1.09e-07!129;UBERON:0004185!1.09e-07!129;UBERON:0003127!2.08e-07!2;UBERON:0004119!2.91e-07!169;UBERON:0000925!2.91e-07!169;UBERON:0006595!2.91e-07!169;UBERON:0000341!4.02e-07!2;UBERON:0001041!6.66e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.08e-16;1!UBERON:0004913;2.08e-16;1!UBERON:0003703;2.08e-16;1!UBERON:0001567;2.08e-16;1!UBERON:0001174;2.08e-16;1!UBERON:0004914;2.08e-16;1!UBERON:0002394;4.87e-16;4!UBERON:0003928;4.87e-16;4!UBERON:0002294;1.41e-09;7!UBERON:0001173;1.41e-09;7!UBERON:0006955;3.57e-09;2!UBERON:0004801;3.57e-09;2!UBERON:0001829;7.21e-09;2!UBERON:0004089;7.21e-09;2!UBERON:0000058;5.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.65e-16,1;UBERON:0003703,1.65e-16,1;UBERON:0001174,1.65e-16,1;UBERON:0004914,1.65e-16,1;UBERON:0001831,3.07e-16,1;UBERON:0001567,3.07e-16,1;UBERON:0008801,3.07e-16,1;UBERON:0002394,4.84e-11,6;UBERON:0003928,4.84e-11,6;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0001829,8.74e-09,2;UBERON:0004089,8.74e-09,2;UBERON:0002294,1.17e-07,9;UBERON:0001173,1.17e-07,9;UBERON:0004912,1.17e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0.474541238222193,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03092396566842,0,0,0,1.3480252672099,0,0,0.0986434056369336,0,0,0,0,0,0,4.023159999825,0,0.227586896570999,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.19351266257817,0.219267951258557,0.574808199372465,0,0,0,0,0,0,0.977756913674015,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.47856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65005630761156,1.95068679971631,0,0,0,0,0.233939463462106,0,0,0,0,0.754814217833368,0,0,2.82190377816914,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0.26940821205835,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr20:62173459..62173472,- | |||
}} |
Revision as of 09:36, 12 September 2013
Short description: | p@chr20:62173459..62173472, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:62173459..62173472, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.43e-09 | 2 |
corneal epithelial cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.65e-16 | 1 |
extrahepatic bile duct | 1.65e-16 | 1 |
common bile duct | 1.65e-16 | 1 |
duodenal papilla | 1.65e-16 | 1 |
parotid gland | 3.07e-16 | 1 |
cheek | 3.07e-16 | 1 |
parotid gland primordium | 3.07e-16 | 1 |
bile duct | 4.84e-11 | 6 |
digestive system duct | 4.84e-11 | 6 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
major salivary gland | 8.74e-09 | 2 |
midface | 8.74e-09 | 2 |
biliary system | 1.17e-07 | 9 |
biliary tree | 1.17e-07 | 9 |
biliary bud | 1.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.87e-31 | 2 |
cystadenocarcinoma | 1.21e-16 | 1 |
mucinous cystadenocarcinoma | 1.21e-16 | 1 |
adenocarcinoma | 2.52e-15 | 25 |
carcinoma | 1.36e-13 | 106 |
gastrointestinal system cancer | 1.73e-10 | 14 |
cell type cancer | 7.99e-10 | 143 |
tubular adenocarcinoma | 6.42e-09 | 2 |
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