FFCP PHASE1:Hg19::chr22:20878024..20878053,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51586|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14248|TSSclassifier=S|UniProt=C9JGN2,B4DGD6|association_with_transcript=94bp_to_ENST00000445189,ENST00000542312,uc011aht.1_5end|coexpression_cluster_id=C88|description=CAGE_peak_16_at_MED15_5end|id=chr22:20878024..20878053,+|ontology_enrichment_celltype=CL:0000148!1.40e-41!10;CL:0000541!1.40e-41!10;CL:0000147!1.63e-29!14;CL:0002567!1.24e-26!3;CL:0000710!1.90e-20!20;CL:0000075!5.96e-15!27;CL:0000333!1.05e-14!41;CL:0002077!4.32e-12!33;CL:0002566!4.09e-10!1;CL:0000325!4.15e-10!39;CL:0000133!5.63e-10!59;CL:0000221!4.07e-08!71;CL:0000453!1.89e-07!5|ontology_enrichment_celltype_v019=CL:0000148;4.33e-107;10!CL:0000147;1.37e-76;14!CL:0002567;1.54e-66;3!CL:0000710;1.09e-53;20!CL:0000075;8.11e-40;27!CL:0002077;6.99e-28;34!CL:0002566;1.34e-23;1!CL:0000149;7.70e-07;4|ontology_enrichment_celltype_v019_2=CL:0000148,4.33e-107,10;CL:0000541,4.33e-107,10;CL:0000147,1.37e-76,14;CL:0002567,1.54e-66,3;CL:0000710,1.09e-53,20;CL:0000075,8.11e-40,27;CL:0002077,1.21e-31,34;CL:0000333,4.90e-25,41;CL:0002566,1.34e-23,1;CL:0000133,1.20e-17,59;CL:0000221,1.55e-14,72;CL:0000149,7.70e-07,4|ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!UBERON:0003056;1.46e-08;3!CL:0000221;4.29e-08;72|ontology_enrichment_disease=DOID:1909!5.75e-18!2;DOID:6193!1.48e-09!1|ontology_enrichment_disease_v019=DOID:1909;3.43e-12;2|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-12,2|ontology_enrichment_uberon=UBERON:0002079!8.91e-10!1;UBERON:0002038!1.76e-09!1;UBERON:0009661!1.76e-09!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.5283575478919,39.3448078325026,51.5756767724207,5.13217338068116,11.8251616608822,20.1229848755425,10.861404439962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p16@MED15}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=51586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14248 | |||
|TSSclassifier=S | |||
|UniProt=C9JGN2,B4DGD6 | |||
|association_with_transcript=94bp_to_ENST00000445189,ENST00000542312,uc011aht.1_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_16_at_MED15_5end | |||
|id=chr22:20878024..20878053,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.40e-41!10;CL:0000541!1.40e-41!10;CL:0000147!1.63e-29!14;CL:0002567!1.24e-26!3;CL:0000710!1.90e-20!20;CL:0000075!5.96e-15!27;CL:0000333!1.05e-14!41;CL:0002077!4.32e-12!33;CL:0002566!4.09e-10!1;CL:0000325!4.15e-10!39;CL:0000133!5.63e-10!59;CL:0000221!4.07e-08!71;CL:0000453!1.89e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.33e-107;10!CL:0000147;1.37e-76;14!CL:0002567;1.54e-66;3!CL:0000710;1.09e-53;20!CL:0000075;8.11e-40;27!CL:0002077;6.99e-28;34!CL:0002566;1.34e-23;1!CL:0000149;7.70e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.33e-107,10;CL:0000541,4.33e-107,10;CL:0000147,1.37e-76,14;CL:0002567,1.54e-66,3;CL:0000710,1.09e-53,20;CL:0000075,8.11e-40,27;CL:0002077,1.21e-31,34;CL:0000333,4.90e-25,41;CL:0002566,1.34e-23,1;CL:0000133,1.20e-17,59;CL:0000221,1.55e-14,72;CL:0000149,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.20e-09;59!UBERON:0003056;1.46e-08;3!CL:0000221;4.29e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!5.75e-18!2;DOID:6193!1.48e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.43e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002079!8.91e-10!1;UBERON:0002038!1.76e-09!1;UBERON:0009661!1.76e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.5283575478919,39.3448078325026,51.5756767724207,5.13217338068116,11.8251616608822,20.1229848755425,10.861404439962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@MED15 | |||
}} |
Revision as of 11:02, 12 September 2013
Short description: | p16@MED15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_MED15_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 94bp_to_ENST00000445189, ENST00000542312, uc011aht.1_5end |
EntrezGene: | MED15 |
HGNC: | 14248 |
UniProt: | C9JGN2B4DGD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.33e-107 | 10 |
melanoblast | 4.33e-107 | 10 |
pigment cell | 1.37e-76 | 14 |
light melanocyte | 1.54e-66 | 3 |
neurecto-epithelial cell | 1.09e-53 | 20 |
columnar/cuboidal epithelial cell | 8.11e-40 | 27 |
ecto-epithelial cell | 1.21e-31 | 34 |
migratory neural crest cell | 4.90e-25 | 41 |
dark melanocyte | 1.34e-23 | 1 |
neurectodermal cell | 1.20e-17 | 59 |
ectodermal cell | 1.55e-14 | 72 |
visual pigment cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.24e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.