FFCP PHASE1:Hg19::chr2:189840572..189840582,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:189840572..189840582,+|id=chr2:189840572..189840582,+|ontology_enrichment_celltype=CL:0000057!5.70e-12!75;CL:0002620!8.07e-12!23;CL:0000055!7.82e-10!180|ontology_enrichment_celltype_v019=CL:1000306;9.19e-13;4!CL:0002547;9.19e-13;4!CL:1000487;4.17e-07;2|ontology_enrichment_celltype_v019_2=CL:1000306,7.26e-13,4;CL:0002547,7.26e-13,4;CL:1000487,3.28e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.75e-08!5;DOID:450!1.75e-08!5;DOID:66!1.75e-08!5;DOID:423!1.75e-08!5;DOID:0080000!1.75e-08!5;DOID:11722!1.75e-08!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002426;1.61e-13;1!UBERON:0003831;1.61e-13;1!UBERON:0003898;1.61e-13;1!UBERON:0004830;1.61e-13;1!UBERON:0003830;1.61e-13;1!UBERON:0005175;1.61e-13;1!UBERON:0001774;1.61e-13;1!UBERON:0001103;1.61e-13;1!UBERON:0007029;6.05e-13;1!UBERON:0004797;9.19e-13;4!UBERON:0000415;9.19e-13;4!UBERON:0007240;9.19e-13;4!UBERON:0005742;9.19e-13;4!UBERON:0005734;9.19e-13;4!UBERON:0004664;9.19e-13;4!UBERON:0004663;9.19e-13;4!UBERON:0005090;2.15e-07;2!UBERON:0001630;2.15e-07;2!UBERON:0000341;4.17e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.61e-13,1;UBERON:0003831,1.61e-13,1;UBERON:0003898,1.61e-13,1;UBERON:0004830,1.61e-13,1;UBERON:0003830,1.61e-13,1;UBERON:0005175,1.61e-13,1;UBERON:0001774,1.61e-13,1;UBERON:0001103,1.61e-13,1;UBERON:0010084,1.61e-13,1;UBERON:0007029,4.23e-13,1;UBERON:0000415,7.26e-13,4;UBERON:0007240,7.26e-13,4;UBERON:0005742,7.26e-13,4;UBERON:0005734,7.26e-13,4;UBERON:0004664,7.26e-13,4;UBERON:0004663,7.26e-13,4;UBERON:0004797,9.88e-08,7;UBERON:0005090,2.15e-07,2;UBERON:0001630,2.15e-07,2;UBERON:0000341,3.09e-07,2|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78059279707759,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.375355559615893,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.0974370051611986,0.757301322732344,0.460249493211497,1.2931684545505,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,0.178428988797162,0.788512075169673,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.751941714077915,0,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,2.20368642781448,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,2.21922344601045,0.189403005275089,0.754703705257725,0,0,0.453692771289717,0.310874401165561,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.450772826991655,0.380805212168795,0,0.727394636810238,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:189840572..189840582,+ | |||
|id=chr2:189840572..189840582,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.70e-12!75;CL:0002620!8.07e-12!23;CL:0000055!7.82e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:1000306;9.19e-13;4!CL:0002547;9.19e-13;4!CL:1000487;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.26e-13,4;CL:0002547,7.26e-13,4;CL:1000487,3.28e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.75e-08!5;DOID:450!1.75e-08!5;DOID:66!1.75e-08!5;DOID:423!1.75e-08!5;DOID:0080000!1.75e-08!5;DOID:11722!1.75e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.61e-13;1!UBERON:0003831;1.61e-13;1!UBERON:0003898;1.61e-13;1!UBERON:0004830;1.61e-13;1!UBERON:0003830;1.61e-13;1!UBERON:0005175;1.61e-13;1!UBERON:0001774;1.61e-13;1!UBERON:0001103;1.61e-13;1!UBERON:0007029;6.05e-13;1!UBERON:0004797;9.19e-13;4!UBERON:0000415;9.19e-13;4!UBERON:0007240;9.19e-13;4!UBERON:0005742;9.19e-13;4!UBERON:0005734;9.19e-13;4!UBERON:0004664;9.19e-13;4!UBERON:0004663;9.19e-13;4!UBERON:0005090;2.15e-07;2!UBERON:0001630;2.15e-07;2!UBERON:0000341;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.61e-13,1;UBERON:0003831,1.61e-13,1;UBERON:0003898,1.61e-13,1;UBERON:0004830,1.61e-13,1;UBERON:0003830,1.61e-13,1;UBERON:0005175,1.61e-13,1;UBERON:0001774,1.61e-13,1;UBERON:0001103,1.61e-13,1;UBERON:0010084,1.61e-13,1;UBERON:0007029,4.23e-13,1;UBERON:0000415,7.26e-13,4;UBERON:0007240,7.26e-13,4;UBERON:0005742,7.26e-13,4;UBERON:0005734,7.26e-13,4;UBERON:0004664,7.26e-13,4;UBERON:0004663,7.26e-13,4;UBERON:0004797,9.88e-08,7;UBERON:0005090,2.15e-07,2;UBERON:0001630,2.15e-07,2;UBERON:0000341,3.09e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78059279707759,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.375355559615893,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.0974370051611986,0.757301322732344,0.460249493211497,1.2931684545505,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,0.178428988797162,0.788512075169673,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.767309866440312,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.751941714077915,0,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,2.20368642781448,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,2.21922344601045,0.189403005275089,0.754703705257725,0,0,0.453692771289717,0.310874401165561,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.450772826991655,0.380805212168795,0,0.727394636810238,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,1.11598505450025,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,1.90451545170992,0,0.0620747142958579,0,0,1.0105859447911,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p@chr2:189840572..189840582,+ | |||
}} |
Revision as of 15:37, 12 September 2013
Short description: | p@chr2:189840572..189840582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:189840572..189840582, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.26e-13 | 4 |
fibroblast of the aortic adventitia | 7.26e-13 | 4 |
smooth muscle cell of prostate | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.61e-13 | 1 |
respiratory system muscle | 1.61e-13 | 1 |
skeletal muscle of trunk | 1.61e-13 | 1 |
respiratory system skeletal muscle | 1.61e-13 | 1 |
thoracic segment muscle | 1.61e-13 | 1 |
chest organ | 1.61e-13 | 1 |
muscle of trunk | 1.61e-13 | 1 |
diaphragm | 1.61e-13 | 1 |
future diaphragm | 1.61e-13 | 1 |
surface | 4.23e-13 | 1 |
artery wall | 7.26e-13 | 4 |
tunica adventitia of artery | 7.26e-13 | 4 |
adventitia | 7.26e-13 | 4 |
tunica adventitia of blood vessel | 7.26e-13 | 4 |
aorta tunica adventitia | 7.26e-13 | 4 |
aorta wall | 7.26e-13 | 4 |
blood vessel layer | 9.88e-08 | 7 |
muscle structure | 2.15e-07 | 2 |
muscle organ | 2.15e-07 | 2 |
throat | 3.09e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.