FFCP PHASE1:Mm9::chr10:117147159..117147184,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17246|HGNC=|MCL_coexpression_id=2520|UniProt=|association_with_transcript=-25bp_to_ENSMUST00000137102_5end|description=CAGE_peak_5_at_Mdm2_5end|id=chr10:117147159..117147184,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,3.21e-07,9;CL:0000355,3.96e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!2.28e-07!47;UBERON:0000010!2.57e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.87e-09,45;UBERON:0000010,7.72e-09,11;UBERON:0002100,1.42e-07,90;UBERON:0002410,3.21e-07,9;UBERON:0001134,3.96e-07,9;UBERON:0002036,3.96e-07,9;UBERON:0002385,3.96e-07,9;UBERON:0000486,3.96e-07,9;UBERON:0007503,3.96e-07,9;UBERON:0001015,3.96e-07,9;UBERON:0002329,3.96e-07,9;UBERON:0003082,3.96e-07,9;UBERON:0003059,3.96e-07,9;UBERON:0007282,3.96e-07,9;UBERON:0004290,3.96e-07,9;UBERON:0009618,3.96e-07,9|phase1_expression=0,0.697950815278722,2.27499619694768,2.72217790176147,7.51343594919521,0.839396359559449,1.16806320297763,0.129123323441576,0.422366166455,0.468129052643987,0.513653904676515,0.398860794976682,0.342401459862411,0.34968160967599,0,2.02475267389826,1.39912375625629,0.473193248037357,0.137114433605739,0,0.510259740906419,1.09220046320974,1.30599894569468,1.75991665072747,0.68822784320151,1.72269589234506,0.430761996159075,0.646413698057667,0.760093677825496,1.00812051903972,1.33038306393183,5.71527606113668,4.92051830067656,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,3.66466620781659,7.64700934440319,6.14740936462601,4.85510353031154,11.5825072537531,13.2803779897564,11.3798986340243,3.9119567217402,0,0.878744730937887,1.94429899074283,2.65974201088189,0,0,0.725362142011344,0.336093799142464,6.17422646486273,3.72493471920384,5.15672092277442,0,0,0,5.08266798103698,3.55717918444456,0.899899717281399,1.97773272513395,0.7104801149461,1.19840044207362,1.92109152660777,0,0,0,0,0,0,0,0,2.20231761998777,0.893811366596314,0.153606533256243,0.263772575460388,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0,0.186399445825301,12.9491790599745,8.08615693142605,0.869593466105033,0.860423876981386,6.11974200336975,3.2382191498269,3.89865850468601,1.79210754838934,0.983110940922263,3.40860645156115,4.41636207824877,1.41335829804136,0.14084341977668,10.2661181931454,10.1922095882658,0,1.5154372870785,2.53359865475099,2.02209778005913,1.02765491747154,1.55362730188303,3.11728492036132,0.520455980298408,1.82679286987285,1.61430848079241,1.20578112442098,2.58695155698551,2.63899841792318,3.46072954828123,1.3013942122792,2.65383165584962,0.647067399789637,0.883366073841574,0,0,0.878342391034642,1.04723353406728,2.04365644166873,2.15667224110656,2.99951365496704,2.41433431438823,0.449371918214468,0,0,0.347648640384553,0.511430914660661,0.41557608911912,0.973447578406546,0.203678727700633,1.11966273549084,0.758168275301024,1.05220927943237,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0.59710280045548,0.702213187313235,1.80143534980301,3.12579849335152,0.828503090142008,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.658239399653922,0.820837320395476,1.37816976227955,1.16959989940266,0.658650345873152,0.805238512562231,0.630869845692382,0,3.63460661282178,1.32225283331772,0,0.464473343720877,0.644337306610467,1.00841762311671,0.889512175379481,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,0.397912944082302,0.779856348476481,1.79763881730844,1.51296634912286,1.59313018603494,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.885660887877613,1.41298855057237,1.35736880313981,4.15033677922008,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,2.17059443777175,1.78238096246994,2.01387296215567,0.810676133875177,1.09824565275233,2.87536413054709,2.23284568601102,3.12037673114561,3.03094653536534,4.12614051100398,2.41221760681684,1.66277871149944,0,0.325929952884052,0,0.234690248288502,0.837531287209079,2.38043640886014,2.73187107000918,0.788175720530955,1.32878813789265,2.07291199254733,2.45794972073607,1.03610989119537,1.88043776155965,10.5553898757491,12.5098307278303,1.96705709207614,0.551873492609465,0.481651769963376,0.820481806145422,2.78689407140348,0.252470927204373,7.2566890465739,4.29482618726302,2.58508077279359,3.58453196928828,6.68396022247182,4.52922449262132,5.26253912177363,7.89090816360542,4.74345333535828,0,0.709700426041343,0.35613120733451,0.325773918707152,1.15479086080775,5.30980553359851,0.485561272309963,0,1.50884063804718,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,1.42598951353889,3.79244109522979,2.10837217149998,7.21948802737308,2.38307724027652,0.36012218806262,0.258717367565509,0,1.06404140185364,1.24858172321449,0.822745103010605,2.13125464380219,9.38686832254841,4.87213762986786,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| ||
|EntrezGene=17246 | |||
|HGNC= | |||
|MCL_coexpression_id=2520 | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENSMUST00000137102_5end | |||
|description=CAGE_peak_5_at_Mdm2_5end | |||
|id=chr10:117147159..117147184,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.21e-07,9;CL:0000355,3.96e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.28e-07!47;UBERON:0000010!2.57e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.87e-09,45;UBERON:0000010,7.72e-09,11;UBERON:0002100,1.42e-07,90;UBERON:0002410,3.21e-07,9;UBERON:0001134,3.96e-07,9;UBERON:0002036,3.96e-07,9;UBERON:0002385,3.96e-07,9;UBERON:0000486,3.96e-07,9;UBERON:0007503,3.96e-07,9;UBERON:0001015,3.96e-07,9;UBERON:0002329,3.96e-07,9;UBERON:0003082,3.96e-07,9;UBERON:0003059,3.96e-07,9;UBERON:0007282,3.96e-07,9;UBERON:0004290,3.96e-07,9;UBERON:0009618,3.96e-07,9 | |||
|phase1_expression=0,0.697950815278722,2.27499619694768,2.72217790176147,7.51343594919521,0.839396359559449,1.16806320297763,0.129123323441576,0.422366166455,0.468129052643987,0.513653904676515,0.398860794976682,0.342401459862411,0.34968160967599,0,2.02475267389826,1.39912375625629,0.473193248037357,0.137114433605739,0,0.510259740906419,1.09220046320974,1.30599894569468,1.75991665072747,0.68822784320151,1.72269589234506,0.430761996159075,0.646413698057667,0.760093677825496,1.00812051903972,1.33038306393183,5.71527606113668,4.92051830067656,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,3.66466620781659,7.64700934440319,6.14740936462601,4.85510353031154,11.5825072537531,13.2803779897564,11.3798986340243,3.9119567217402,0,0.878744730937887,1.94429899074283,2.65974201088189,0,0,0.725362142011344,0.336093799142464,6.17422646486273,3.72493471920384,5.15672092277442,0,0,0,5.08266798103698,3.55717918444456,0.899899717281399,1.97773272513395,0.7104801149461,1.19840044207362,1.92109152660777,0,0,0,0,0,0,0,0,2.20231761998777,0.893811366596314,0.153606533256243,0.263772575460388,0,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0,0.186399445825301,12.9491790599745,8.08615693142605,0.869593466105033,0.860423876981386,6.11974200336975,3.2382191498269,3.89865850468601,1.79210754838934,0.983110940922263,3.40860645156115,4.41636207824877,1.41335829804136,0.14084341977668,10.2661181931454,10.1922095882658,0,1.5154372870785,2.53359865475099,2.02209778005913,1.02765491747154,1.55362730188303,3.11728492036132,0.520455980298408,1.82679286987285,1.61430848079241,1.20578112442098,2.58695155698551,2.63899841792318,3.46072954828123,1.3013942122792,2.65383165584962,0.647067399789637,0.883366073841574,0,0,0.878342391034642,1.04723353406728,2.04365644166873,2.15667224110656,2.99951365496704,2.41433431438823,0.449371918214468,0,0,0.347648640384553,0.511430914660661,0.41557608911912,0.973447578406546,0.203678727700633,1.11966273549084,0.758168275301024,1.05220927943237,0,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.61734640922383,0.59710280045548,0.702213187313235,1.80143534980301,3.12579849335152,0.828503090142008,0,0.180062061461015,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.658239399653922,0.820837320395476,1.37816976227955,1.16959989940266,0.658650345873152,0.805238512562231,0.630869845692382,0,3.63460661282178,1.32225283331772,0,0.464473343720877,0.644337306610467,1.00841762311671,0.889512175379481,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,0.397912944082302,0.779856348476481,1.79763881730844,1.51296634912286,1.59313018603494,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.189709611372772,0.885660887877613,1.41298855057237,1.35736880313981,4.15033677922008,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,2.17059443777175,1.78238096246994,2.01387296215567,0.810676133875177,1.09824565275233,2.87536413054709,2.23284568601102,3.12037673114561,3.03094653536534,4.12614051100398,2.41221760681684,1.66277871149944,0,0.325929952884052,0,0.234690248288502,0.837531287209079,2.38043640886014,2.73187107000918,0.788175720530955,1.32878813789265,2.07291199254733,2.45794972073607,1.03610989119537,1.88043776155965,10.5553898757491,12.5098307278303,1.96705709207614,0.551873492609465,0.481651769963376,0.820481806145422,2.78689407140348,0.252470927204373,7.2566890465739,4.29482618726302,2.58508077279359,3.58453196928828,6.68396022247182,4.52922449262132,5.26253912177363,7.89090816360542,4.74345333535828,0,0.709700426041343,0.35613120733451,0.325773918707152,1.15479086080775,5.30980553359851,0.485561272309963,0,1.50884063804718,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,1.42598951353889,3.79244109522979,2.10837217149998,7.21948802737308,2.38307724027652,0.36012218806262,0.258717367565509,0,1.06404140185364,1.24858172321449,0.822745103010605,2.13125464380219,9.38686832254841,4.87213762986786,7.27743713581374,1.97863503529776,0.968786560175433,0.844380948994182,1.3130957840345,0.492422699235184,0.874442509889552,0.370850604021019,1.02522528478712,0.206386867963223,1.11116716421827,0.565105371014073,0.546776910884101,0.228778173206523,1.69978429993855,1.39951452323658,0.829199842826543,1.90934123603023,0.158167996790568,0,0.324016022465404,0.836353184057875,0.218362563746178,0.539457385539283,0.495920734352016,1.04702376793612,1.29614973291793,1.86401793926078,0,0.448549638131936,0.496375471371293,0.388902376688095,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.716106782669926,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.350630706544707,1.13365191807606,15.0950448294364,14.80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| |||
|short_description=p5@Mdm2 | |||
}} | |||
Revision as of 15:50, 12 September 2013
| Short description: | p5@Mdm2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Mdm2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2520 |
| Association with transcript: | -25bp_to_ENSMUST00000137102_5end |
| EntrezGene: | Mdm2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 3.21e-07 | 9 |
| multi-potent skeletal muscle stem cell | 3.96e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| trunk mesenchyme | 4.87e-09 | 45 |
| peripheral nervous system | 7.72e-09 | 11 |
| trunk | 1.42e-07 | 90 |
| autonomic nervous system | 3.21e-07 | 9 |
| skeletal muscle tissue | 3.96e-07 | 9 |
| striated muscle tissue | 3.96e-07 | 9 |
| muscle tissue | 3.96e-07 | 9 |
| multilaminar epithelium | 3.96e-07 | 9 |
| epithelial vesicle | 3.96e-07 | 9 |
| musculature | 3.96e-07 | 9 |
| somite | 3.96e-07 | 9 |
| myotome | 3.96e-07 | 9 |
| presomitic mesoderm | 3.96e-07 | 9 |
| presumptive segmental plate | 3.96e-07 | 9 |
| dermomyotome | 3.96e-07 | 9 |
| trunk paraxial mesoderm | 3.96e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
