FFCP PHASE1:Mm9::chr10:127140521..127140573,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127140521..127140573,+|id=chr10:127140521..127140573,+|ontology_enrichment_celltype=CL:0002563!3.16e-09!9;CL:0002251!3.16e-09!9;CL:0000239!5.02e-07!6;CL:0000677!5.02e-07!6;CL:0000212!5.02e-07!6;CL:0000584!5.02e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,9.47e-12,9;CL:0002251,9.47e-12,9;CL:0000239,7.85e-09,6;CL:0000677,7.85e-09,6;CL:0000584,7.85e-09,6;CL:0000075,2.24e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.02e-21!59;UBERON:0000160!2.24e-18!43;UBERON:0000344!7.07e-15!15;UBERON:0001242!3.91e-13!13;UBERON:0000060!3.91e-13!13;UBERON:0001262!3.91e-13!13;UBERON:0004786!3.91e-13!13;UBERON:0003350!3.16e-09!9;UBERON:0004808!3.16e-09!9;UBERON:0001277!3.16e-09!9;UBERON:0001007!2.18e-08!128;UBERON:0001555!2.18e-08!128;UBERON:0007026!2.18e-08!128;UBERON:0004923!3.47e-08!24;UBERON:0004119!5.39e-08!130;UBERON:0000925!5.39e-08!130;UBERON:0006595!5.39e-08!130;UBERON:0004921!1.86e-07!126;UBERON:0004185!1.86e-07!126;UBERON:0000485!5.69e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.83e-33,47;UBERON:0000160,2.29e-32,31;UBERON:0000344,2.91e-19,15;UBERON:0001242,6.08e-17,13;UBERON:0001262,6.08e-17,13;UBERON:0004786,6.08e-17,13;UBERON:0003350,9.47e-12,9;UBERON:0004808,9.47e-12,9;UBERON:0001277,9.47e-12,9;UBERON:0004923,1.40e-11,24;UBERON:0000485,3.77e-09,11;UBERON:0001007,6.86e-08,116;UBERON:0001555,6.86e-08,116;UBERON:0007026,6.86e-08,116;UBERON:0004119,1.44e-07,118;UBERON:0000925,1.44e-07,118;UBERON:0006595,1.44e-07,118;UBERON:0004921,7.82e-07,114|phase1_expression=0,463.788316752711,424.059291111048,511.164517108543,507.908270165596,138.164640783485,138.999521154338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,290.546239792827,263.820673227246,418.040869875735,351.932550861964,327.08533121718,619.476347427779,668.383904123336,239.468951507729,0,0,0,71.0574984588135,76.966640800982,65.1300246476957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.0755715601067855,0.289864488701678,0,0,0,0,0,23.1733293217391,0,0,0,0,0,0,0,0,0,0,95.229355685696,0,0,0,0,0,0,0,0.376999773989026,9.14621380617183,0.144599356919912,0,0,0,0,121.154644791779,0,0,522.665134956778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,660.176728401628,386.097827328775,0.213288250535234,0.232236671860439,14.3042882067524,38.9249202523051,36.4699991905587,64.1060359999324,427.550684451605,94.0431031474102,79.6732611896854,80.3784147046249,82.8597370256261,391.885262173241,388.183937574951,438.110801159608,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0,0,0,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,1.81467135269789,0,0,0.604647113929502,0,0,0,18.3484088149437,0,0,0,0,0,0,0,0,0,0,0.713475270408282,1.15184314421485,0.913394847343798,0,0,0,0,0,0,0,0.656563598980245,364.642526623943,0,0,0,0,0,0,0,0,0,0,34.3681422485441,0.949007980743406,6.91286188231286,19.6569720295678,19.6542998253601,40.1787117292967,31.1536640148936,25.8705316420301,25.9138382564189,218.530844969963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,2.02227859295016,2.22246727801615,2.06035057238894,4.49286893428541,4.29585259998456,5.83002389747551,3.77252682772152,3.37109426891577,3.77748399188729,4.25022470271538,3.81034953026459,3.24476112645595,2.70072908649187,2.88460130562315,3.09117732282234,1.37147700954166,3.90446773550542,1.1921809497366,3.0522747492789,3.48204707536723,3.72304274723377,2.74391959309159,5.78753365163254,4.07412341537585,1.68342681497322,3.91495559809775,4.33419722452479,3.27384834535751,4.18329471202108,2.3148793317737,0.499621155875892,4.67863216890817,4.72716318906256,0.191288332068843,0.882365676478062,0.231867835620421|short_description=p@chr10:127140521..127140573,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127140521..127140573,+ | |||
|id=chr10:127140521..127140573,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.16e-09!9;CL:0002251!3.16e-09!9;CL:0000239!5.02e-07!6;CL:0000677!5.02e-07!6;CL:0000212!5.02e-07!6;CL:0000584!5.02e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.47e-12,9;CL:0002251,9.47e-12,9;CL:0000239,7.85e-09,6;CL:0000677,7.85e-09,6;CL:0000584,7.85e-09,6;CL:0000075,2.24e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.02e-21!59;UBERON:0000160!2.24e-18!43;UBERON:0000344!7.07e-15!15;UBERON:0001242!3.91e-13!13;UBERON:0000060!3.91e-13!13;UBERON:0001262!3.91e-13!13;UBERON:0004786!3.91e-13!13;UBERON:0003350!3.16e-09!9;UBERON:0004808!3.16e-09!9;UBERON:0001277!3.16e-09!9;UBERON:0001007!2.18e-08!128;UBERON:0001555!2.18e-08!128;UBERON:0007026!2.18e-08!128;UBERON:0004923!3.47e-08!24;UBERON:0004119!5.39e-08!130;UBERON:0000925!5.39e-08!130;UBERON:0006595!5.39e-08!130;UBERON:0004921!1.86e-07!126;UBERON:0004185!1.86e-07!126;UBERON:0000485!5.69e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.83e-33,47;UBERON:0000160,2.29e-32,31;UBERON:0000344,2.91e-19,15;UBERON:0001242,6.08e-17,13;UBERON:0001262,6.08e-17,13;UBERON:0004786,6.08e-17,13;UBERON:0003350,9.47e-12,9;UBERON:0004808,9.47e-12,9;UBERON:0001277,9.47e-12,9;UBERON:0004923,1.40e-11,24;UBERON:0000485,3.77e-09,11;UBERON:0001007,6.86e-08,116;UBERON:0001555,6.86e-08,116;UBERON:0007026,6.86e-08,116;UBERON:0004119,1.44e-07,118;UBERON:0000925,1.44e-07,118;UBERON:0006595,1.44e-07,118;UBERON:0004921,7.82e-07,114 | |||
|phase1_expression=0,463.788316752711,424.059291111048,511.164517108543,507.908270165596,138.164640783485,138.999521154338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,290.546239792827,263.820673227246,418.040869875735,351.932550861964,327.08533121718,619.476347427779,668.383904123336,239.468951507729,0,0,0,71.0574984588135,76.966640800982,65.1300246476957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.0755715601067855,0.289864488701678,0,0,0,0,0,23.1733293217391,0,0,0,0,0,0,0,0,0,0,95.229355685696,0,0,0,0,0,0,0,0.376999773989026,9.14621380617183,0.144599356919912,0,0,0,0,121.154644791779,0,0,522.665134956778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,660.176728401628,386.097827328775,0.213288250535234,0.232236671860439,14.3042882067524,38.9249202523051,36.4699991905587,64.1060359999324,427.550684451605,94.0431031474102,79.6732611896854,80.3784147046249,82.8597370256261,391.885262173241,388.183937574951,438.110801159608,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0,0,0,0.169745085775188,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,1.81467135269789,0,0,0.604647113929502,0,0,0,18.3484088149437,0,0,0,0,0,0,0,0,0,0,0.713475270408282,1.15184314421485,0.913394847343798,0,0,0,0,0,0,0,0.656563598980245,364.642526623943,0,0,0,0,0,0,0,0,0,0,34.3681422485441,0.949007980743406,6.91286188231286,19.6569720295678,19.6542998253601,40.1787117292967,31.1536640148936,25.8705316420301,25.9138382564189,218.530844969963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,2.02227859295016,2.22246727801615,2.06035057238894,4.49286893428541,4.29585259998456,5.83002389747551,3.77252682772152,3.37109426891577,3.77748399188729,4.25022470271538,3.81034953026459,3.24476112645595,2.70072908649187,2.88460130562315,3.09117732282234,1.37147700954166,3.90446773550542,1.1921809497366,3.0522747492789,3.48204707536723,3.72304274723377,2.74391959309159,5.78753365163254,4.07412341537585,1.68342681497322,3.91495559809775,4.33419722452479,3.27384834535751,4.18329471202108,2.3148793317737,0.499621155875892,4.67863216890817,4.72716318906256,0.191288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p@chr10:127140521..127140573,+ | |||
}} |
Revision as of 16:04, 12 September 2013
Short description: | p@chr10:127140521..127140573, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127140521..127140573, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.47e-12 | 9 |
epithelial cell of alimentary canal | 9.47e-12 | 9 |
brush border epithelial cell | 7.85e-09 | 6 |
gut absorptive cell | 7.85e-09 | 6 |
enterocyte | 7.85e-09 | 6 |
columnar/cuboidal epithelial cell | 2.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.83e-33 | 47 |
intestine | 2.29e-32 | 31 |
mucosa | 2.91e-19 | 15 |
intestinal mucosa | 6.08e-17 | 13 |
wall of intestine | 6.08e-17 | 13 |
gastrointestinal system mucosa | 6.08e-17 | 13 |
epithelium of mucosa | 9.47e-12 | 9 |
gastrointestinal system epithelium | 9.47e-12 | 9 |
intestinal epithelium | 9.47e-12 | 9 |
organ component layer | 1.40e-11 | 24 |
simple columnar epithelium | 3.77e-09 | 11 |
digestive system | 6.86e-08 | 116 |
digestive tract | 6.86e-08 | 116 |
primitive gut | 6.86e-08 | 116 |
endoderm-derived structure | 1.44e-07 | 118 |
endoderm | 1.44e-07 | 118 |
presumptive endoderm | 1.44e-07 | 118 |
subdivision of digestive tract | 7.82e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.