FFCP PHASE1:Mm9::chr10:24635877..24635888,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=128|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:24635877..24635888,-|id=chr10:24635877..24635888,-|ontology_enrichment_celltype=CL:0000181!9.00e-09!5;CL:0000417!9.00e-09!5;CL:0000668!9.00e-09!5;CL:0000412!9.00e-09!5;CL:0000182!9.00e-09!5;CL:0000068!5.59e-08!3;CL:0002202!5.59e-08!3;CL:0000069!5.59e-08!3;CL:0002632!5.59e-08!3;CL:0002368!5.59e-08!3;CL:0000307!5.59e-08!3;CL:0000377!5.59e-08!3|ontology_enrichment_celltype_v019_2=CL:0000182,1.21e-16,5;CL:0000057,3.04e-10,1;CL:0000632,3.04e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.42e-23!22;UBERON:0007499!2.42e-23!22;UBERON:0006925!2.42e-23!22;UBERON:0009497!2.42e-23!22;UBERON:0000015!2.42e-23!22;UBERON:0002423!2.42e-23!22;UBERON:0006235!2.42e-23!22;UBERON:0008835!2.42e-23!22;UBERON:0003894!2.42e-23!22;UBERON:0004161!2.42e-23!22;UBERON:0008836!2.42e-23!22;UBERON:0009854!3.66e-22!23;UBERON:0009856!3.66e-22!23;UBERON:0002365!4.33e-20!25;UBERON:0002330!4.33e-20!25;UBERON:0005256!2.36e-10!47;UBERON:0003914!5.60e-09!47;UBERON:0005172!1.81e-08!49;UBERON:0005173!1.81e-08!49;UBERON:0002417!1.81e-08!49;UBERON:0000916!1.81e-08!49;UBERON:0009569!2.15e-08!66;UBERON:0000077!3.04e-08!97;UBERON:0001041!5.27e-08!92;UBERON:0005057!5.32e-08!51;UBERON:0003126!5.59e-08!3;UBERON:0001005!5.59e-08!3;UBERON:0007196!5.59e-08!3;UBERON:0001558!5.59e-08!3;UBERON:0002368!2.75e-07!60;UBERON:0003929!3.61e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.14e-32,22;UBERON:0007499,6.14e-32,22;UBERON:0006925,6.14e-32,22;UBERON:0009497,6.14e-32,22;UBERON:0000015,6.14e-32,22;UBERON:0002423,6.14e-32,22;UBERON:0006235,6.14e-32,22;UBERON:0008835,6.14e-32,22;UBERON:0003894,6.14e-32,22;UBERON:0004161,6.14e-32,22;UBERON:0008836,6.14e-32,22;UBERON:0009854,1.54e-30,23;UBERON:0009856,1.54e-30,23;UBERON:0002365,4.47e-28,25;UBERON:0002330,4.47e-28,25;UBERON:0005256,1.91e-15,45;UBERON:0003914,9.04e-15,47;UBERON:0005172,3.77e-14,49;UBERON:0005173,3.77e-14,49;UBERON:0002417,3.77e-14,49;UBERON:0000916,3.77e-14,49;UBERON:0003929,1.48e-12,55;UBERON:0002368,1.80e-11,60;UBERON:0003104,2.83e-11,61;UBERON:0009142,2.83e-11,61;UBERON:0002530,1.50e-10,65;UBERON:0000490,2.21e-10,66;UBERON:0009569,2.21e-10,66;UBERON:0005911,6.60e-10,69;UBERON:0000949,1.80e-09,72;UBERON:0005177,1.39e-08,79;UBERON:0001041,1.81e-08,80;UBERON:0002100,1.84e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,11.873470216032,11.695975514058,1.34408066129201,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0.575392274901621,1.62135226775035,0.274561413188081,4.31304619582064,0,0.624075346229121,1.51547326768267,0.896987067609561,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr10:24635877..24635888,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:24635877..24635888,- | |||
|id=chr10:24635877..24635888,- | |||
|ontology_enrichment_celltype=CL:0000181!9.00e-09!5;CL:0000417!9.00e-09!5;CL:0000668!9.00e-09!5;CL:0000412!9.00e-09!5;CL:0000182!9.00e-09!5;CL:0000068!5.59e-08!3;CL:0002202!5.59e-08!3;CL:0000069!5.59e-08!3;CL:0002632!5.59e-08!3;CL:0002368!5.59e-08!3;CL:0000307!5.59e-08!3;CL:0000377!5.59e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.21e-16,5;CL:0000057,3.04e-10,1;CL:0000632,3.04e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.42e-23!22;UBERON:0007499!2.42e-23!22;UBERON:0006925!2.42e-23!22;UBERON:0009497!2.42e-23!22;UBERON:0000015!2.42e-23!22;UBERON:0002423!2.42e-23!22;UBERON:0006235!2.42e-23!22;UBERON:0008835!2.42e-23!22;UBERON:0003894!2.42e-23!22;UBERON:0004161!2.42e-23!22;UBERON:0008836!2.42e-23!22;UBERON:0009854!3.66e-22!23;UBERON:0009856!3.66e-22!23;UBERON:0002365!4.33e-20!25;UBERON:0002330!4.33e-20!25;UBERON:0005256!2.36e-10!47;UBERON:0003914!5.60e-09!47;UBERON:0005172!1.81e-08!49;UBERON:0005173!1.81e-08!49;UBERON:0002417!1.81e-08!49;UBERON:0000916!1.81e-08!49;UBERON:0009569!2.15e-08!66;UBERON:0000077!3.04e-08!97;UBERON:0001041!5.27e-08!92;UBERON:0005057!5.32e-08!51;UBERON:0003126!5.59e-08!3;UBERON:0001005!5.59e-08!3;UBERON:0007196!5.59e-08!3;UBERON:0001558!5.59e-08!3;UBERON:0002368!2.75e-07!60;UBERON:0003929!3.61e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.14e-32,22;UBERON:0007499,6.14e-32,22;UBERON:0006925,6.14e-32,22;UBERON:0009497,6.14e-32,22;UBERON:0000015,6.14e-32,22;UBERON:0002423,6.14e-32,22;UBERON:0006235,6.14e-32,22;UBERON:0008835,6.14e-32,22;UBERON:0003894,6.14e-32,22;UBERON:0004161,6.14e-32,22;UBERON:0008836,6.14e-32,22;UBERON:0009854,1.54e-30,23;UBERON:0009856,1.54e-30,23;UBERON:0002365,4.47e-28,25;UBERON:0002330,4.47e-28,25;UBERON:0005256,1.91e-15,45;UBERON:0003914,9.04e-15,47;UBERON:0005172,3.77e-14,49;UBERON:0005173,3.77e-14,49;UBERON:0002417,3.77e-14,49;UBERON:0000916,3.77e-14,49;UBERON:0003929,1.48e-12,55;UBERON:0002368,1.80e-11,60;UBERON:0003104,2.83e-11,61;UBERON:0009142,2.83e-11,61;UBERON:0002530,1.50e-10,65;UBERON:0000490,2.21e-10,66;UBERON:0009569,2.21e-10,66;UBERON:0005911,6.60e-10,69;UBERON:0000949,1.80e-09,72;UBERON:0005177,1.39e-08,79;UBERON:0001041,1.81e-08,80;UBERON:0002100,1.84e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,11.873470216032,11.695975514058,1.34408066129201,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0.575392274901621,1.62135226775035,0.274561413188081,4.31304619582064,0,0.624075346229121,1.51547326768267,0.896987067609561,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:24635877..24635888,- | |||
}} |
Revision as of 16:29, 12 September 2013
Short description: | p@chr10:24635877..24635888, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:24635877..24635888, - |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.21e-16 | 5 |
fibroblast | 3.04e-10 | 1 |
hepatic stellate cell | 3.04e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 6.14e-32 | 22 |
epithelial sac | 6.14e-32 | 22 |
digestive gland | 6.14e-32 | 22 |
epithelium of foregut-midgut junction | 6.14e-32 | 22 |
anatomical boundary | 6.14e-32 | 22 |
hepatobiliary system | 6.14e-32 | 22 |
foregut-midgut junction | 6.14e-32 | 22 |
hepatic diverticulum | 6.14e-32 | 22 |
liver primordium | 6.14e-32 | 22 |
septum transversum | 6.14e-32 | 22 |
liver bud | 6.14e-32 | 22 |
digestive tract diverticulum | 1.54e-30 | 23 |
sac | 1.54e-30 | 23 |
exocrine gland | 4.47e-28 | 25 |
exocrine system | 4.47e-28 | 25 |
trunk mesenchyme | 1.91e-15 | 45 |
epithelial tube | 9.04e-15 | 47 |
abdomen element | 3.77e-14 | 49 |
abdominal segment element | 3.77e-14 | 49 |
abdominal segment of trunk | 3.77e-14 | 49 |
abdomen | 3.77e-14 | 49 |
gut epithelium | 1.48e-12 | 55 |
endocrine gland | 1.80e-11 | 60 |
mesenchyme | 2.83e-11 | 61 |
entire embryonic mesenchyme | 2.83e-11 | 61 |
gland | 1.50e-10 | 65 |
unilaminar epithelium | 2.21e-10 | 66 |
subdivision of trunk | 2.21e-10 | 66 |
endo-epithelium | 6.60e-10 | 69 |
endocrine system | 1.80e-09 | 72 |
trunk region element | 1.39e-08 | 79 |
foregut | 1.81e-08 | 80 |
trunk | 1.84e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.