FFCP PHASE1:Hg19::chr2:216257754..216257766,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2335|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3778|TSSclassifier=N|UniProt=|association_with_transcript=159bp_to_uc010zjp.1_5end|coexpression_cluster_id=C79|description=CAGE_peak_69_at_FN1_5end|id=chr2:216257754..216257766,-|ontology_enrichment_celltype=CL:0000055!2.81e-29!180;CL:0000057!2.71e-22!75;CL:0000680!2.69e-12!57;CL:0000056!2.69e-12!57;CL:0000355!2.69e-12!57;CL:0000187!7.90e-12!54;CL:0000183!1.23e-11!59;CL:0002620!2.06e-10!23;CL:0000393!3.68e-10!60;CL:0000211!3.68e-10!60;CL:0002371!1.46e-09!591;CL:0000188!3.22e-08!9;CL:0000048!5.10e-08!430;CL:0000034!7.33e-08!444;CL:0000144!9.04e-08!625;CL:0000723!1.09e-07!436|ontology_enrichment_celltype_v019=CL:0000632;5.33e-10;3!CL:0000737;5.85e-08;4!CL:0002536;1.11e-07;2!CL:0002549;1.31e-07;2|ontology_enrichment_celltype_v019_2=CL:0000632,2.74e-10,3;CL:0002549,7.31e-08,2;CL:0000737,9.17e-08,4;CL:0002536,1.33e-07,2;CL:0000057,6.68e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0004290!2.48e-11!70;UBERON:0001134!1.03e-10!61;UBERON:0002036!1.03e-10!61;UBERON:0003082!1.03e-10!61;UBERON:0002385!1.38e-10!63;UBERON:0001015!1.38e-10!63;UBERON:0000383!1.38e-10!63;UBERON:0005256!5.67e-09!143;UBERON:0000486!1.56e-08!82;UBERON:0005631!1.28e-07!14;UBERON:0000158!1.28e-07!14|ontology_enrichment_uberon_v019=UBERON:0005631;2.48e-08;10!UBERON:0000158;2.48e-08;10!UBERON:0005629;1.31e-07;2!UBERON:0005358;1.31e-07;2!UBERON:0001886;1.31e-07;2!UBERON:0004086;1.31e-07;2!UBERON:0005282;1.31e-07;2!UBERON:0005281;1.31e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.11e-10,14;UBERON:0000158,1.11e-10,14;UBERON:0003124,5.45e-08,7;UBERON:0005629,7.31e-08,2;UBERON:0005358,7.31e-08,2;UBERON:0001886,7.31e-08,2;UBERON:0004086,7.31e-08,2;UBERON:0005282,7.31e-08,2;UBERON:0005281,7.31e-08,2|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,1.31064823278103,3.4289707169699,0.247532705920093,0.331397375727916,0.672325146451775,0,0,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.02290049474824,0,0,0,1.5905718941022,7.29952305453954,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.45650098894541,1.72101972449288,0.354668382198357,1.12135520028461,2.1349799145941,0.24666754841716,0.622422070799533,0.134710672069688,0.326923806226917,1.66493170409425,2.88087962239999,0,0.312160076830321,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,1.82032272387605,0,0.673344455816265,0.625592599359821,0,0.438977620880838,0.30648779579902,0.45071417671979,0.453728732640084,1.97328599257748,0.640672166455702,1.27159140695737,0.900273288253207,0.721367704669072,0.515281080091258,0.18611685633159,0.843881661206331,0.389748020644795,1.00973509697646,0.368199594569197,0.323292113637624,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,1.26160425437814,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,1.29149563659404,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0.36669142910475,0.129271715757778,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,1.03985430765404,1.96271887676878,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,1.10621501125022,0.60818530127658,0.391602314925481,1.02943027143257,0,0,0,0,1.66435439510497,0.907170879989041,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,0,0.462629081407967,1.24293207719189,0.164254312027618,0,0.232420756919918,0,1.00253235151642,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0.924291702687866,0.921022048356777,0.275673144969061,1.71872391789238,1.88521702088497,0.681813019328807,0.5341922138804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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=159bp_to_uc010zjp.1_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_69_at_FN1_5end | |||
|id=chr2:216257754..216257766,- | |||
|ontology_enrichment_celltype=CL:0000055!2.81e-29!180;CL:0000057!2.71e-22!75;CL:0000680!2.69e-12!57;CL:0000056!2.69e-12!57;CL:0000355!2.69e-12!57;CL:0000187!7.90e-12!54;CL:0000183!1.23e-11!59;CL:0002620!2.06e-10!23;CL:0000393!3.68e-10!60;CL:0000211!3.68e-10!60;CL:0002371!1.46e-09!591;CL:0000188!3.22e-08!9;CL:0000048!5.10e-08!430;CL:0000034!7.33e-08!444;CL:0000144!9.04e-08!625;CL:0000723!1.09e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000632;5.33e-10;3!CL:0000737;5.85e-08;4!CL:0002536;1.11e-07;2!CL:0002549;1.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.74e-10,3;CL:0002549,7.31e-08,2;CL:0000737,9.17e-08,4;CL:0002536,1.33e-07,2;CL:0000057,6.68e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0004290!2.48e-11!70;UBERON:0001134!1.03e-10!61;UBERON:0002036!1.03e-10!61;UBERON:0003082!1.03e-10!61;UBERON:0002385!1.38e-10!63;UBERON:0001015!1.38e-10!63;UBERON:0000383!1.38e-10!63;UBERON:0005256!5.67e-09!143;UBERON:0000486!1.56e-08!82;UBERON:0005631!1.28e-07!14;UBERON:0000158!1.28e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.48e-08;10!UBERON:0000158;2.48e-08;10!UBERON:0005629;1.31e-07;2!UBERON:0005358;1.31e-07;2!UBERON:0001886;1.31e-07;2!UBERON:0004086;1.31e-07;2!UBERON:0005282;1.31e-07;2!UBERON:0005281;1.31e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.11e-10,14;UBERON:0000158,1.11e-10,14;UBERON:0003124,5.45e-08,7;UBERON:0005629,7.31e-08,2;UBERON:0005358,7.31e-08,2;UBERON:0001886,7.31e-08,2;UBERON:0004086,7.31e-08,2;UBERON:0005282,7.31e-08,2;UBERON:0005281,7.31e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,1.31064823278103,3.4289707169699,0.247532705920093,0.331397375727916,0.672325146451775,0,0,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.02290049474824,0,0,0,1.5905718941022,7.29952305453954,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.45650098894541,1.72101972449288,0.354668382198357,1.12135520028461,2.1349799145941,0.24666754841716,0.622422070799533,0.134710672069688,0.326923806226917,1.66493170409425,2.88087962239999,0,0.312160076830321,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,1.82032272387605,0,0.673344455816265,0.625592599359821,0,0.438977620880838,0.30648779579902,0.45071417671979,0.453728732640084,1.97328599257748,0.640672166455702,1.27159140695737,0.900273288253207,0.721367704669072,0.515281080091258,0.18611685633159,0.843881661206331,0.389748020644795,1.00973509697646,0.368199594569197,0.323292113637624,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,1.26160425437814,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,1.29149563659404,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0.36669142910475,0.129271715757778,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,1.03985430765404,1.96271887676878,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,1.10621501125022,0.60818530127658,0.391602314925481,1.02943027143257,0,0,0,0,1.66435439510497,0.907170879989041,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,0,0.462629081407967,1.24293207719189,0.164254312027618,0,0.232420756919918,0,1.00253235151642,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0.924291702687866,0.921022048356777,0.275673144969061,1.71872391789238,1.88521702088497,0.681813019328807,0.534192213880424,0.330569830721956,0.384380134730212,0.382838137483752,0.4046311234222,0.464845549297286,2.20368642781448,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0.949138274156178,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.731140468893853,0,0.409499734223957,0.424216295861138,2.26016233240486,0.551365343546124,1.32687795048244,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0.7133421029625,0,0.633322905892992,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.921482106297696,0,0,3.11664374064136,0,0,0.19924798825107,0,0,0,0,4.0435146396035,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,7.97502899329799,0.457987967009312,34.6472604412113,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.895528817321244,1.63599316893057,2.21922344601045,0,0.251567901752575,2.66943366478961,0.228840068396924,1.81477108515887,0.310874401165561,0,0,0.899606224327209,0.465788870628778,1.65882483136342,1.32920857278997,0.521745061811734,0,0,0,1.63663793282303,0.644463342254931,1.39210127963548,0.398095888698616,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.552317850755522,0,0.622077260032973,0,0,2.67352101155024,0,0.169732529954025,1.06287460050841,0.9914861140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| |||
|short_description=p69@FN1 | |||
}} |
Revision as of 16:35, 12 September 2013
Short description: | p69@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_69_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 159bp_to_uc010zjp.1_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.74e-10 | 3 |
fibroblast of choroid plexus | 7.31e-08 | 2 |
striated muscle cell | 9.17e-08 | 4 |
amniotic epithelial cell | 1.33e-07 | 2 |
fibroblast | 6.68e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.11e-10 | 14 |
membranous layer | 1.11e-10 | 14 |
chorion | 5.45e-08 | 7 |
vascular plexus | 7.31e-08 | 2 |
ventricle of nervous system | 7.31e-08 | 2 |
choroid plexus | 7.31e-08 | 2 |
brain ventricle | 7.31e-08 | 2 |
ventricular system of brain | 7.31e-08 | 2 |
ventricular system of central nervous system | 7.31e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.