FFCP PHASE1:Mm9::chr10:41529426..41529460,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103268|HGNC=|MCL_coexpression_id=364|UniProt=Q8VDS7,B2RR53|association_with_transcript=0bp_to_ENSMUST00000105504,ENSMUST00000105505_5end|description=CAGE_peak_1_at_Cep57l1_5end|id=chr10:41529426..41529460,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!5.53e-11!147;UBERON:0002323!4.86e-09!37;UBERON:0004458!4.86e-09!37;UBERON:0003886!9.86e-09!38;UBERON:0002553!3.02e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0002323,4.86e-09,37;UBERON:0004458,4.86e-09,37;UBERON:0003886,9.85e-09,38;UBERON:0002553,3.02e-08,39;UBERON:0001048,3.88e-08,134|phase1_expression=5.60520964866779,0,0.909998478779072,0,1.00179145989269,2.18243053485457,1.63528848416868,3.48632973292256,0.281577444303333,0,1.71217968225505,2.79202556483677,3.59521532855532,4.45844052336887,7.32841475994458,12.5534665781692,15.3903613188192,6.94016763788123,7.26706498110415,8.06340338416257,9.86502165752409,9.92909512008853,6.79119451761232,3.67982572424835,2.75291137280604,0,0.430761996159075,2.15471232685889,3.6104449696711,2.77233142735924,1.55211357458713,6.98533740805594,7.38077745101484,0,7.51014211353314,6.31691652362271,6.94175811292055,3.76678467663217,3.1253413780952,5.23523743973798,2.94115744015507,4.09827290975067,4.85510353031154,11.330713617802,9.32667767219534,5.68994931701213,0.782391344348039,2.8343270329458,1.09843091367236,1.74986909166855,3.49966054063406,4.31257693094915,4.69791296961662,3.62681071005672,4.7053131879945,3.34437266846731,2.86533439938757,3.09403255366465,3.84401275633236,1.05798195854407,3.1691570175309,0.677689064138264,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.92109152660777,6.0139975138917,6.61529097825284,6.73039876324422,4.28476476605705,2.87129103237098,9.43179153955146,6.80502844229478,8.27296907949019,2.20231761998777,5.87361755191863,4.45458946443106,4.08847491963601,4.39140689291566,4.16730696445408,4.74611098302348,2.25105044012672,5.80633341551878,3.53554302568401,5.41012387036591,4.47358669980721,3.25622631332691,5.06329452715463,4.05810284182349,3.44169550792555,0,5.39703191637817,3.89865850468601,6.72040330646003,6.60088774619234,13.8048561288227,12.2099422163348,12.0135455333516,3.09855523508697,8.98285341900225,7.64415719119937,0,2.16491041011214,3.04031838570118,2.02209778005913,4.45317130904334,14.2415836005944,7.12522267511159,8.50078101154066,7.30717147949139,7.84092690670599,6.33035090321015,6.11461277105665,5.6549966098354,5.19109432242185,6.50697106139602,7.96149496754887,5.98537344805414,9.27534377533653,7.27312879702833,5.59175283654366,9.07620470735796,5.65506108396329,3.32094171771169,5.51149572727233,3.59941638596045,6.98886248901856,4.94309110035915,10.0650132620098,10.4293112253677,9.56033761057521,5.37002460393694,7.68815764870372,6.48965052271031,6.00852246716866,6.84238338355512,6.31806896084187,5.47148825304832,14.5734896118228,6.89706313300419,11.343914177737,15.0704817835715,10.0013653752452,16.6547836370305,10.9631017734883,11.6416516832557,9.48499168904506,14.7502742530899,12.4925298156404,12.9325482132269,12.2340789659263,10.0993128291428,13.3758388665163,13.1362616100206,5.61770549850588,5.1469581422943,5.11494298912067,8.69928244649108,7.27030785941398,10.0834754418168,15.1516630774535,13.9702604540657,13.5755059340893,12.7893669612724,12.3405764643825,5.83826711835847,8.72167204541446,6.07419617092652,5.18840381093477,4.09359964790931,5.92785311285837,6.03928884421673,7.36014819974445,6.48299057989492,1.65209391491899,2.64450566663544,12.1574302805083,13.9342003116263,11.7269389803105,11.0925938542838,8.89512175379481,6.08722003560189,1.89811624617805,3.29397909448022,4.02136334080431,3.78017296878187,5.26403035221624,8.98819408654222,2.80979464837102,2.38969527905241,7.39704813717019,11.0821057231437,11.270773567308,12.2190796707189,10.861339281387,5.19005067188357,8.85311519739602,9.00421902675573,7.06494275286187,7.15703550746443,6.52195779591728,14.5155241973002,12.579775687245,14.8408994174003,13.9973483758067,12.7823894668781,10.4396599230382,10.64475708568,6.32327384422638,8.51140380883053,10.0637744569148,11.9085103253921,9.04909252032226,7.07220858251913,10.7638448113147,7.23665282045051,6.46636165583116,6.82169082373745,14.9927778326664,13.7493519477902,14.5507953938871,16.0806007144143,9.28370199455454,2.14647012643579,9.61574379047765,8.41565820665345,5.10255259703959,5.57135270033509,5.18054945597687,3.61622646453779,4.52373851817817,1.63171705145613,5.4094070032094,3.58717770196152,4.97706828962155,6.21221938938677,9.01642199571715,4.79694761688309,5.67914794949262,6.63745865304285,7.75524231838076,7.40803273652911,7.12955757063661,6.79383673893198,7.69140333182299,9.35218745316198,5.53402889125133,11.5675673911851,9.65192579416227,10.5058706163681,8.63300884573953,6.59880491890142,9.2921596837974,10.9251286269742,9.97667737983678,11.5049098651098,8.26845300066164,13.5271465095328,7.23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| ||
|EntrezGene=103268 | |||
|HGNC= | |||
|MCL_coexpression_id=364 | |||
|UniProt=Q8VDS7,B2RR53 | |||
|association_with_transcript=0bp_to_ENSMUST00000105504,ENSMUST00000105505_5end | |||
|description=CAGE_peak_1_at_Cep57l1_5end | |||
|id=chr10:41529426..41529460,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!5.53e-11!147;UBERON:0002323!4.86e-09!37;UBERON:0004458!4.86e-09!37;UBERON:0003886!9.86e-09!38;UBERON:0002553!3.02e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002323,4.86e-09,37;UBERON:0004458,4.86e-09,37;UBERON:0003886,9.85e-09,38;UBERON:0002553,3.02e-08,39;UBERON:0001048,3.88e-08,134 | |||
|phase1_expression=5.60520964866779,0,0.909998478779072,0,1.00179145989269,2.18243053485457,1.63528848416868,3.48632973292256,0.281577444303333,0,1.71217968225505,2.79202556483677,3.59521532855532,4.45844052336887,7.32841475994458,12.5534665781692,15.3903613188192,6.94016763788123,7.26706498110415,8.06340338416257,9.86502165752409,9.92909512008853,6.79119451761232,3.67982572424835,2.75291137280604,0,0.430761996159075,2.15471232685889,3.6104449696711,2.77233142735924,1.55211357458713,6.98533740805594,7.38077745101484,0,7.51014211353314,6.31691652362271,6.94175811292055,3.76678467663217,3.1253413780952,5.23523743973798,2.94115744015507,4.09827290975067,4.85510353031154,11.330713617802,9.32667767219534,5.68994931701213,0.782391344348039,2.8343270329458,1.09843091367236,1.74986909166855,3.49966054063406,4.31257693094915,4.69791296961662,3.62681071005672,4.7053131879945,3.34437266846731,2.86533439938757,3.09403255366465,3.84401275633236,1.05798195854407,3.1691570175309,0.677689064138264,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.92109152660777,6.0139975138917,6.61529097825284,6.73039876324422,4.28476476605705,2.87129103237098,9.43179153955146,6.80502844229478,8.27296907949019,2.20231761998777,5.87361755191863,4.45458946443106,4.08847491963601,4.39140689291566,4.16730696445408,4.74611098302348,2.25105044012672,5.80633341551878,3.53554302568401,5.41012387036591,4.47358669980721,3.25622631332691,5.06329452715463,4.05810284182349,3.44169550792555,0,5.39703191637817,3.89865850468601,6.72040330646003,6.60088774619234,13.8048561288227,12.2099422163348,12.0135455333516,3.09855523508697,8.98285341900225,7.64415719119937,0,2.16491041011214,3.04031838570118,2.02209778005913,4.45317130904334,14.2415836005944,7.12522267511159,8.50078101154066,7.30717147949139,7.84092690670599,6.33035090321015,6.11461277105665,5.6549966098354,5.19109432242185,6.50697106139602,7.96149496754887,5.98537344805414,9.27534377533653,7.27312879702833,5.59175283654366,9.07620470735796,5.65506108396329,3.32094171771169,5.51149572727233,3.59941638596045,6.98886248901856,4.94309110035915,10.0650132620098,10.4293112253677,9.56033761057521,5.37002460393694,7.68815764870372,6.48965052271031,6.00852246716866,6.84238338355512,6.31806896084187,5.47148825304832,14.5734896118228,6.89706313300419,11.343914177737,15.0704817835715,10.0013653752452,16.6547836370305,10.9631017734883,11.6416516832557,9.48499168904506,14.7502742530899,12.4925298156404,12.9325482132269,12.2340789659263,10.0993128291428,13.3758388665163,13.1362616100206,5.61770549850588,5.1469581422943,5.11494298912067,8.69928244649108,7.27030785941398,10.0834754418168,15.1516630774535,13.9702604540657,13.5755059340893,12.7893669612724,12.3405764643825,5.83826711835847,8.72167204541446,6.07419617092652,5.18840381093477,4.09359964790931,5.92785311285837,6.03928884421673,7.36014819974445,6.48299057989492,1.65209391491899,2.64450566663544,12.1574302805083,13.9342003116263,11.7269389803105,11.0925938542838,8.89512175379481,6.08722003560189,1.89811624617805,3.29397909448022,4.02136334080431,3.78017296878187,5.26403035221624,8.98819408654222,2.80979464837102,2.38969527905241,7.39704813717019,11.0821057231437,11.270773567308,12.2190796707189,10.861339281387,5.19005067188357,8.85311519739602,9.00421902675573,7.06494275286187,7.15703550746443,6.52195779591728,14.5155241973002,12.579775687245,14.8408994174003,13.9973483758067,12.7823894668781,10.4396599230382,10.64475708568,6.32327384422638,8.51140380883053,10.0637744569148,11.9085103253921,9.04909252032226,7.07220858251913,10.7638448113147,7.23665282045051,6.46636165583116,6.82169082373745,14.9927778326664,13.7493519477902,14.5507953938871,16.0806007144143,9.28370199455454,2.14647012643579,9.61574379047765,8.41565820665345,5.10255259703959,5.57135270033509,5.18054945597687,3.61622646453779,4.52373851817817,1.63171705145613,5.4094070032094,3.58717770196152,4.97706828962155,6.21221938938677,9.01642199571715,4.79694761688309,5.67914794949262,6.63745865304285,7.75524231838076,7.40803273652911,7.12955757063661,6.79383673893198,7.69140333182299,9.35218745316198,5.53402889125133,11.5675673911851,9.65192579416227,10.5058706163681,8.63300884573953,6.59880491890142,9.2921596837974,10.9251286269742,9.97667737983678,11.5049098651098,8.26845300066164,13.5271465095328,7.23599220871019,13.0872142611902,12.1209108650805,12.009396801561,8.4334886859999,11.3449097573006,6.80879211507576,13.1444598642856,5.82114077022395,7.07312215604255,9.93105308396732,8.56170324489939,6.58196082408484,2.13125464380219,4.69343416127421,5.93129798418696,2.64634077665954,7.4198813823666,6.78150592122803,7.53911561601948,5.252383136138,3.61109979439135,3.49777003955821,7.6024373824309,13.6696704638282,13.6215332855727,19.8158144285592,18.271740329455,21.734382207643,12.8115776995653,6.28920190977265,6.01791244991729,5.11339903076368,6.68269432610579,7.90839983952838,11.1825706919767,12.2046035128635,13.5907392409405,10.0446779323242,7.95699643670442,6.11635572367486,3.40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| |||
|short_description=p1@Cep57l1 | |||
}} | |||
Revision as of 16:43, 12 September 2013
| Short description: | p1@Cep57l1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cep57l1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:364 |
| Association with transcript: | 0bp_to_ENSMUST00000105504, ENSMUST00000105505_5end |
| EntrezGene: | Cep57l1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| body cavity | 4.86e-09 | 37 |
| body cavity or lining | 4.86e-09 | 37 |
| body cavity precursor | 9.85e-09 | 38 |
| anatomical cavity | 3.02e-08 | 39 |
| primordium | 3.88e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
