FFCP PHASE1:Mm9::chr10:61142788..61142812,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=366|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:61142788..61142812,-|id=chr10:61142788..61142812,-|ontology_enrichment_celltype=CL:0000063!1.88e-13!66;CL:0002563!7.65e-11!9;CL:0002251!7.65e-11!9;CL:0000066!1.10e-09!25;CL:0000144!2.47e-09!121;CL:0000012!2.47e-09!121;CL:0002371!6.54e-08!118;CL:0000075!1.11e-07!7;CL:0000223!1.48e-07!20;CL:0000239!1.93e-07!6;CL:0000677!1.93e-07!6;CL:0000212!1.93e-07!6;CL:0000584!1.93e-07!6;CL:0000034!8.46e-07!97|ontology_enrichment_celltype_v019_2=CL:0002563,3.52e-26,9;CL:0002251,3.52e-26,9;CL:0000066,1.25e-16,25;CL:0000239,2.78e-15,6;CL:0000677,2.78e-15,6;CL:0000584,2.78e-15,6;CL:0002076,2.88e-15,15;CL:0000223,2.88e-14,20;CL:0000075,4.47e-13,7;CL:0002250,8.08e-13,3;CL:0000723,1.35e-07,91;CL:0000048,1.35e-07,91;CL:0000034,6.10e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.77e-12,3;DOID:4045,2.77e-12,3|ontology_enrichment_uberon=UBERON:0000485!4.80e-12!11;UBERON:0003350!7.65e-11!9;UBERON:0004808!7.65e-11!9;UBERON:0001277!7.65e-11!9;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000344!7.49e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.34e-26,11;UBERON:0003350,3.52e-26,9;UBERON:0004808,3.52e-26,9;UBERON:0001277,3.52e-26,9;UBERON:0001242,8.68e-18,13;UBERON:0001262,8.68e-18,13;UBERON:0004786,8.68e-18,13;UBERON:0000344,2.88e-15,15;UBERON:0004923,4.11e-09,24;UBERON:0000490,8.82e-09,66;UBERON:0000160,8.53e-07,31|phase1_expression=1.44133962394315,2.09385244583617,2.27499619694768,3.32710632437513,1.50268718983904,0.503637815735669,1.16806320297763,1.80772652818207,0.140788722151667,0,0,0,0.684802919724823,1.57356724354195,0,0,0,0.157731082679119,0.274228867211478,0,0,0.992909512008853,2.35079810225042,0,0,2.29692785646008,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0.635030673459631,0,0,4.04392267651784,2.99222361645286,6.12508068787107,2.09265815368454,3.1253413780952,3.14114246384279,5.29408339227913,2.73218193983378,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,1.51004345451963,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,5.2175607966302,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:61142788..61142812,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=366 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:61142788..61142812,- | |||
|id=chr10:61142788..61142812,- | |||
|ontology_enrichment_celltype=CL:0000063!1.88e-13!66;CL:0002563!7.65e-11!9;CL:0002251!7.65e-11!9;CL:0000066!1.10e-09!25;CL:0000144!2.47e-09!121;CL:0000012!2.47e-09!121;CL:0002371!6.54e-08!118;CL:0000075!1.11e-07!7;CL:0000223!1.48e-07!20;CL:0000239!1.93e-07!6;CL:0000677!1.93e-07!6;CL:0000212!1.93e-07!6;CL:0000584!1.93e-07!6;CL:0000034!8.46e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.52e-26,9;CL:0002251,3.52e-26,9;CL:0000066,1.25e-16,25;CL:0000239,2.78e-15,6;CL:0000677,2.78e-15,6;CL:0000584,2.78e-15,6;CL:0002076,2.88e-15,15;CL:0000223,2.88e-14,20;CL:0000075,4.47e-13,7;CL:0002250,8.08e-13,3;CL:0000723,1.35e-07,91;CL:0000048,1.35e-07,91;CL:0000034,6.10e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.77e-12,3;DOID:4045,2.77e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!4.80e-12!11;UBERON:0003350!7.65e-11!9;UBERON:0004808!7.65e-11!9;UBERON:0001277!7.65e-11!9;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000344!7.49e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.34e-26,11;UBERON:0003350,3.52e-26,9;UBERON:0004808,3.52e-26,9;UBERON:0001277,3.52e-26,9;UBERON:0001242,8.68e-18,13;UBERON:0001262,8.68e-18,13;UBERON:0004786,8.68e-18,13;UBERON:0000344,2.88e-15,15;UBERON:0004923,4.11e-09,24;UBERON:0000490,8.82e-09,66;UBERON:0000160,8.53e-07,31 | |||
|phase1_expression=1.44133962394315,2.09385244583617,2.27499619694768,3.32710632437513,1.50268718983904,0.503637815735669,1.16806320297763,1.80772652818207,0.140788722151667,0,0,0,0.684802919724823,1.57356724354195,0,0,0,0.157731082679119,0.274228867211478,0,0,0.992909512008853,2.35079810225042,0,0,2.29692785646008,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0.635030673459631,0,0,4.04392267651784,2.99222361645286,6.12508068787107,2.09265815368454,3.1253413780952,3.14114246384279,5.29408339227913,2.73218193983378,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,1.51004345451963,0.725362142011344,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0,5.2175607966302,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0,0.278047249225598,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0.36012412292203,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:61142788..61142812,- | |||
}} |
Revision as of 17:03, 12 September 2013
Short description: | p@chr10:61142788..61142812, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:61142788..61142812, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.52e-26 | 9 |
epithelial cell of alimentary canal | 3.52e-26 | 9 |
epithelial cell | 1.25e-16 | 25 |
brush border epithelial cell | 2.78e-15 | 6 |
gut absorptive cell | 2.78e-15 | 6 |
enterocyte | 2.78e-15 | 6 |
endo-epithelial cell | 2.88e-15 | 15 |
endodermal cell | 2.88e-14 | 20 |
columnar/cuboidal epithelial cell | 4.47e-13 | 7 |
intestinal crypt stem cell | 8.08e-13 | 3 |
somatic stem cell | 1.35e-07 | 91 |
multi fate stem cell | 1.35e-07 | 91 |
stem cell | 6.10e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.34e-26 | 11 |
epithelium of mucosa | 3.52e-26 | 9 |
gastrointestinal system epithelium | 3.52e-26 | 9 |
intestinal epithelium | 3.52e-26 | 9 |
intestinal mucosa | 8.68e-18 | 13 |
wall of intestine | 8.68e-18 | 13 |
gastrointestinal system mucosa | 8.68e-18 | 13 |
mucosa | 2.88e-15 | 15 |
organ component layer | 4.11e-09 | 24 |
unilaminar epithelium | 8.82e-09 | 66 |
intestine | 8.53e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.77e-12 | 3 |
muscle cancer | 2.77e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.