FFCP PHASE1:Hg19::chr2:234580566..234580577,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54600|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12541|TSSclassifier=S|UniProt=O60656,Q5DSZ5|association_with_transcript=22bp_to_NM_021027,uc002vus.2,uc010zmw.1_5end|coexpression_cluster_id=C51|description=CAGE_peak_3_at_UGT1A9_5end|id=chr2:234580566..234580577,+|ontology_enrichment_celltype=CL:1000415!2.40e-07!2|ontology_enrichment_celltype_v019=CL:0000182;1.62e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.62e-07,12|ontology_enrichment_development_v019=UBERON:0003918;9.48e-19;10!UBERON:0007687;9.48e-19;10!UBERON:0003104;4.95e-11;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.32e-10!55;UBERON:0005173!1.32e-10!55;UBERON:0002417!1.68e-09!61;UBERON:0000916!1.68e-09!61;UBERON:0009497!3.49e-08!25;UBERON:0000015!3.49e-08!25;UBERON:0002423!3.49e-08!25;UBERON:0006235!3.49e-08!25;UBERON:0004161!3.49e-08!25|ontology_enrichment_uberon_v019=UBERON:0005172;4.74e-10;52!UBERON:0005173;4.74e-10;52!UBERON:0002107;5.87e-10;19!UBERON:0006925;5.87e-10;19!UBERON:0002113;3.46e-08;24!UBERON:0011143;3.46e-08;24!UBERON:0002423;1.04e-07;25!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58!UBERON:0000489;7.17e-07;29|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.48e-13,54;UBERON:0005173,3.48e-13,54;UBERON:0002417,7.35e-12,60;UBERON:0000916,7.35e-12,60;UBERON:0002107,5.87e-10,19;UBERON:0006925,5.87e-10,19;UBERON:0008836,5.87e-10,19;UBERON:0008835,1.11e-08,22;UBERON:0003894,1.11e-08,22;UBERON:0009854,2.49e-08,23;UBERON:0007499,1.04e-07,25;UBERON:0009497,1.04e-07,25;UBERON:0000015,1.04e-07,25;UBERON:0002423,1.04e-07,25;UBERON:0006235,1.04e-07,25;UBERON:0004161,1.04e-07,25;UBERON:0002113,1.33e-07,26;UBERON:0003918,1.33e-07,26;UBERON:0011143,1.33e-07,26;UBERON:0005095,1.33e-07,26;UBERON:0007687,1.33e-07,26;UBERON:0009856,1.95e-07,26;UBERON:0005177,5.44e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3422087669995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,2.36315962672562,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6368455241475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.3514638415572,6.45191434060477,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,3.3707013745959,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,4.86858885317099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@UGT1A9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12541 | |||
|TSSclassifier=S | |||
|UniProt=O60656,Q5DSZ5 | |||
|association_with_transcript=22bp_to_NM_021027,uc002vus.2,uc010zmw.1_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_UGT1A9_5end | |||
|id=chr2:234580566..234580577,+ | |||
|ontology_enrichment_celltype=CL:1000415!2.40e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;9.48e-19;10!UBERON:0007687;9.48e-19;10!UBERON:0003104;4.95e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.32e-10!55;UBERON:0005173!1.32e-10!55;UBERON:0002417!1.68e-09!61;UBERON:0000916!1.68e-09!61;UBERON:0009497!3.49e-08!25;UBERON:0000015!3.49e-08!25;UBERON:0002423!3.49e-08!25;UBERON:0006235!3.49e-08!25;UBERON:0004161!3.49e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005172;4.74e-10;52!UBERON:0005173;4.74e-10;52!UBERON:0002107;5.87e-10;19!UBERON:0006925;5.87e-10;19!UBERON:0002113;3.46e-08;24!UBERON:0011143;3.46e-08;24!UBERON:0002423;1.04e-07;25!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58!UBERON:0000489;7.17e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.48e-13,54;UBERON:0005173,3.48e-13,54;UBERON:0002417,7.35e-12,60;UBERON:0000916,7.35e-12,60;UBERON:0002107,5.87e-10,19;UBERON:0006925,5.87e-10,19;UBERON:0008836,5.87e-10,19;UBERON:0008835,1.11e-08,22;UBERON:0003894,1.11e-08,22;UBERON:0009854,2.49e-08,23;UBERON:0007499,1.04e-07,25;UBERON:0009497,1.04e-07,25;UBERON:0000015,1.04e-07,25;UBERON:0002423,1.04e-07,25;UBERON:0006235,1.04e-07,25;UBERON:0004161,1.04e-07,25;UBERON:0002113,1.33e-07,26;UBERON:0003918,1.33e-07,26;UBERON:0011143,1.33e-07,26;UBERON:0005095,1.33e-07,26;UBERON:0007687,1.33e-07,26;UBERON:0009856,1.95e-07,26;UBERON:0005177,5.44e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3422087669995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,2.36315962672562,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6368455241475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.3514638415572,6.45191434060477,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,3.3707013745959,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,4.86858885317099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@UGT1A9 | |||
}} |
Revision as of 17:29, 12 September 2013
Short description: | p3@UGT1A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UGT1A9_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 22bp_to_NM_021027, uc002vus.2, uc010zmw.1_5end |
EntrezGene: | UGT1A9 |
HGNC: | 12541 |
UniProt: | O60656Q5DSZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.48e-13 | 54 |
abdominal segment element | 3.48e-13 | 54 |
abdominal segment of trunk | 7.35e-12 | 60 |
abdomen | 7.35e-12 | 60 |
liver | 5.87e-10 | 19 |
digestive gland | 5.87e-10 | 19 |
liver bud | 5.87e-10 | 19 |
hepatic diverticulum | 1.11e-08 | 22 |
liver primordium | 1.11e-08 | 22 |
digestive tract diverticulum | 2.49e-08 | 23 |
epithelial sac | 1.04e-07 | 25 |
epithelium of foregut-midgut junction | 1.04e-07 | 25 |
anatomical boundary | 1.04e-07 | 25 |
hepatobiliary system | 1.04e-07 | 25 |
foregut-midgut junction | 1.04e-07 | 25 |
septum transversum | 1.04e-07 | 25 |
kidney | 1.33e-07 | 26 |
kidney mesenchyme | 1.33e-07 | 26 |
upper urinary tract | 1.33e-07 | 26 |
kidney rudiment | 1.33e-07 | 26 |
kidney field | 1.33e-07 | 26 |
sac | 1.95e-07 | 26 |
trunk region element | 5.44e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.