FFCP PHASE1:Hg19::chr2:241807934..241807942,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=341|TSSclassifier=S|UniProt=P21549|association_with_transcript=38bp_to_ENST00000307503_5end|coexpression_cluster_id=C5|description=CAGE_peak_6_at_AGXT_5end|id=chr2:241807934..241807942,+|ontology_enrichment_celltype=CL:0000181!9.00e-21!12;CL:0000417!9.00e-21!12;CL:0000668!9.00e-21!12;CL:0000414!9.00e-21!12;CL:0000412!9.00e-21!12;CL:0000182!9.00e-21!12|ontology_enrichment_celltype_v019=CL:0000182;2.56e-19;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.56e-19,12|ontology_enrichment_development_v019=UBERON:0004161;5.06e-10;11!UBERON:0009497;1.26e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.05e-29!19;UBERON:0006925!7.05e-29!19;UBERON:0008836!7.05e-29!19;UBERON:0008835!6.25e-25!22;UBERON:0003894!6.25e-25!22;UBERON:0009854!7.66e-24!23;UBERON:0007499!6.31e-22!25;UBERON:0009497!6.31e-22!25;UBERON:0000015!6.31e-22!25;UBERON:0002423!6.31e-22!25;UBERON:0006235!6.31e-22!25;UBERON:0004161!6.31e-22!25;UBERON:0005057!4.44e-21!26;UBERON:0009856!4.44e-21!26;UBERON:0002365!1.17e-17!31;UBERON:0002330!1.17e-17!31;UBERON:0002368!1.28e-15!35;UBERON:0003929!1.70e-13!54;UBERON:0005172!3.17e-13!55;UBERON:0005173!3.17e-13!55;UBERON:0000949!4.20e-12!45;UBERON:0002417!7.00e-12!61;UBERON:0000916!7.00e-12!61;UBERON:0002530!3.59e-09!59;UBERON:0005911!1.00e-08!82|ontology_enrichment_uberon_v019=UBERON:0002107;8.62e-33;19!UBERON:0006925;8.62e-33;19!UBERON:0002423;4.98e-25;25!UBERON:0002365;3.35e-20;31!UBERON:0002330;3.35e-20;31!UBERON:0002368;1.75e-17;33!UBERON:0000949;1.09e-12;43!UBERON:0005172;3.51e-09;52!UBERON:0005173;3.51e-09;52!UBERON:0002417;3.73e-07;58!UBERON:0000916;3.73e-07;58!UBERON:0002530;9.90e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.62e-33,19;UBERON:0006925,8.62e-33,19;UBERON:0008836,8.62e-33,19;UBERON:0008835,2.20e-28,22;UBERON:0003894,2.20e-28,22;UBERON:0009854,3.61e-27,23;UBERON:0007499,4.98e-25,25;UBERON:0009497,4.98e-25,25;UBERON:0000015,4.98e-25,25;UBERON:0002423,4.98e-25,25;UBERON:0006235,4.98e-25,25;UBERON:0004161,4.98e-25,25;UBERON:0009856,4.40e-24,26;UBERON:0002365,2.91e-20,31;UBERON:0002330,2.91e-20,31;UBERON:0002368,5.48e-18,35;UBERON:0000949,4.63e-14,45;UBERON:0003929,9.21e-12,54;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002530,8.72e-11,59;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0005911,8.19e-08,82;UBERON:0001041,2.26e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,1.96565443335525,10.6342183202653,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80133383961574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57392496792947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68967147769864,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@AGXT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |||
|TSSclassifier=S | |||
|UniProt=P21549 | |||
|association_with_transcript=38bp_to_ENST00000307503_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_AGXT_5end | |||
|id=chr2:241807934..241807942,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.00e-21!12;CL:0000417!9.00e-21!12;CL:0000668!9.00e-21!12;CL:0000414!9.00e-21!12;CL:0000412!9.00e-21!12;CL:0000182!9.00e-21!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.56e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.56e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.06e-10;11!UBERON:0009497;1.26e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.05e-29!19;UBERON:0006925!7.05e-29!19;UBERON:0008836!7.05e-29!19;UBERON:0008835!6.25e-25!22;UBERON:0003894!6.25e-25!22;UBERON:0009854!7.66e-24!23;UBERON:0007499!6.31e-22!25;UBERON:0009497!6.31e-22!25;UBERON:0000015!6.31e-22!25;UBERON:0002423!6.31e-22!25;UBERON:0006235!6.31e-22!25;UBERON:0004161!6.31e-22!25;UBERON:0005057!4.44e-21!26;UBERON:0009856!4.44e-21!26;UBERON:0002365!1.17e-17!31;UBERON:0002330!1.17e-17!31;UBERON:0002368!1.28e-15!35;UBERON:0003929!1.70e-13!54;UBERON:0005172!3.17e-13!55;UBERON:0005173!3.17e-13!55;UBERON:0000949!4.20e-12!45;UBERON:0002417!7.00e-12!61;UBERON:0000916!7.00e-12!61;UBERON:0002530!3.59e-09!59;UBERON:0005911!1.00e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.62e-33;19!UBERON:0006925;8.62e-33;19!UBERON:0002423;4.98e-25;25!UBERON:0002365;3.35e-20;31!UBERON:0002330;3.35e-20;31!UBERON:0002368;1.75e-17;33!UBERON:0000949;1.09e-12;43!UBERON:0005172;3.51e-09;52!UBERON:0005173;3.51e-09;52!UBERON:0002417;3.73e-07;58!UBERON:0000916;3.73e-07;58!UBERON:0002530;9.90e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.62e-33,19;UBERON:0006925,8.62e-33,19;UBERON:0008836,8.62e-33,19;UBERON:0008835,2.20e-28,22;UBERON:0003894,2.20e-28,22;UBERON:0009854,3.61e-27,23;UBERON:0007499,4.98e-25,25;UBERON:0009497,4.98e-25,25;UBERON:0000015,4.98e-25,25;UBERON:0002423,4.98e-25,25;UBERON:0006235,4.98e-25,25;UBERON:0004161,4.98e-25,25;UBERON:0009856,4.40e-24,26;UBERON:0002365,2.91e-20,31;UBERON:0002330,2.91e-20,31;UBERON:0002368,5.48e-18,35;UBERON:0000949,4.63e-14,45;UBERON:0003929,9.21e-12,54;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002530,8.72e-11,59;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0005911,8.19e-08,82;UBERON:0001041,2.26e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,1.96565443335525,10.6342183202653,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80133383961574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57392496792947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68967147769864,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@AGXT | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p6@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_AGXT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 38bp_to_ENST00000307503_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | P21549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.56e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.62e-33 | 19 |
digestive gland | 8.62e-33 | 19 |
liver bud | 8.62e-33 | 19 |
hepatic diverticulum | 2.20e-28 | 22 |
liver primordium | 2.20e-28 | 22 |
digestive tract diverticulum | 3.61e-27 | 23 |
epithelial sac | 4.98e-25 | 25 |
epithelium of foregut-midgut junction | 4.98e-25 | 25 |
anatomical boundary | 4.98e-25 | 25 |
hepatobiliary system | 4.98e-25 | 25 |
foregut-midgut junction | 4.98e-25 | 25 |
septum transversum | 4.98e-25 | 25 |
sac | 4.40e-24 | 26 |
exocrine gland | 2.91e-20 | 31 |
exocrine system | 2.91e-20 | 31 |
endocrine gland | 5.48e-18 | 35 |
endocrine system | 4.63e-14 | 45 |
gut epithelium | 9.21e-12 | 54 |
abdomen element | 9.21e-12 | 54 |
abdominal segment element | 9.21e-12 | 54 |
gland | 8.72e-11 | 59 |
abdominal segment of trunk | 1.31e-10 | 60 |
abdomen | 1.31e-10 | 60 |
endo-epithelium | 8.19e-08 | 82 |
foregut | 2.26e-07 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.