FFCP PHASE1:Mm9::chr10:88194149..88194168,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104303|HGNC=|MCL_coexpression_id=1229|UniProt=P61211,Q14AC7|association_with_transcript=0bp_to_NM_025859,uc007grw.1_5end|description=CAGE_peak_2_at_Arl1_5end|id=chr10:88194149..88194168,+|ontology_enrichment_celltype=CL:0000066!6.58e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.52e-10!43;UBERON:0005409!2.46e-08!59;UBERON:0002108!3.02e-07!16;UBERON:0004119!4.94e-07!130;UBERON:0000925!4.94e-07!130;UBERON:0006595!4.94e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.75e-07,90|phase1_expression=46.4431656603902,79.9153683494137,75.0748744992734,36.5981695681264,36.5653882860833,41.6340594341487,64.009863523174,10.2007425518845,23.7932940436317,16.6185813688615,27.3948749160808,23.6923312216149,8.9024379564227,8.91688104673774,7.32841475994458,7.89653542820321,5.59649502502517,15.6153771852328,11.2433835556706,16.5511964201232,22.1962987294292,18.7659897769673,28.470777016144,79.5162341283231,79.3756112492408,89.0059544378281,136.551552782427,116.569936883066,80.1898830105898,66.0318939971019,97.1179636670235,1.90509202037889,3.07532393792285,0,18.7753552838328,35.5742141067174,18.783580776138,19.2524550138978,30.4720784364282,28.2702821745851,12.3528612486513,18.442228093878,25.24653835762,105.87922391746,104.4182391561,82.7795852249184,4.69434806608824,16.7879370412944,29.6576346691537,30.1366343565139,26.5974201088189,20.125359011096,16.1071301815427,7.97898356212479,10.7550015725588,61.9995240846632,52.4356195087925,53.629897596854,6.06949382578793,12.6957835025288,16.4796164911607,22.0248945844936,27.5681386794453,20.2477436388315,9.88866362566974,29.1296847127901,10.4860038681442,3.84218305321555,8.91730665852908,9.58542162155004,8.62332341540666,16.8534080798244,20.7616428494517,7.7169203505421,7.09256485534949,9.19218786610021,20.9220173898839,25.5374676170375,24.4234387877427,13.7161739239402,13.0827330351446,18.7528813400434,35.177057874174,26.449842671489,24.7533161398432,11.1958862479994,16.5151149726959,17.5215479075783,65.7303358132038,37.6346369331792,47.8276406357768,63.6713668966226,50.9978500280813,45.3350680975766,53.9314426481565,51.9711189032909,38.2008822758365,85.0447309664508,104.433973850353,90.1015915001368,56.4782113304489,75.7126216744475,61.153257529595,28.4426681261332,41.9992619561755,34.9636614355636,32.8590889259609,39.2792546233566,22.7865337609511,20.1881309128162,23.0735484598961,21.3125834818499,28.1350906652391,30.2952507510771,32.5720718765902,30.2856485104518,32.8769307086717,25.8832848886642,13.2691582792481,45.7800185351168,22.7466764014205,35.8807687320064,37.2783522436244,21.958559775866,19.8974371472782,47.2595552135894,26.3593273913025,23.3962065087429,32.7841185848507,25.4644086988199,19.6725259212009,9.29842205635197,34.4172153980707,43.7273432034865,23.6878370797899,24.3361894601636,44.7074807302889,36.078021476927,42.9628689337247,26.0947901299228,17.566259799965,23.4500146522142,21.0672691872259,23.811361218043,22.3840082207869,22.163673609279,24.549851834649,23.2833033665114,15.5208954911646,17.5868654556072,20.586281527182,29.5914238777226,20.8535436919198,32.7357036530837,34.7771810529424,22.8889406841267,32.3018066164088,31.65379257511,30.689657934724,16.9843133479112,18.0585066185444,20.1669508836337,15.1516630774535,18.6926020160034,22.2144642557825,23.950996309292,26.8273401399619,25.9219060055116,31.2663714835613,35.2960047770055,29.2658402460539,30.2633973970438,28.3219648725455,28.0491415209177,28.8097229532854,18.1112117787541,53.1974240603915,47.8655525661015,18.3427895460301,19.5078804362768,25.9023597257408,22.5885547578144,28.0196335244537,34.4308383263732,36.0642086773829,49.2449874624793,49.7643713424534,48.744335650082,46.5964168214697,36.8515957548231,52.305408069676,54.5647088716966,20.863469104839,22.5069569841166,22.5415471346161,20.5687841123767,22.4984885114446,23.9864504024889,30.1638282082707,28.0459281161244,35.167715036468,37.5127378322274,64.6266727049985,12.346537822991,12.9728936774714,11.2431056192427,13.1859078902527,15.4353382241547,22.4070749567649,24.4541716833189,30.1571521801566,36.7912293672029,61.8203288067625,45.7733365632259,59.2871578917665,53.2941432468406,46.4639301021753,55.4810049567872,30.853782757823,21.7915123536057,23.7928865605358,24.2735472658519,30.2750420292168,22.6133447546451,30.2315423925237,34.3435220229726,34.8373668474682,38.0919266195893,39.5447826270568,41.6212819377975,39.717545829156,45.7091025117577,42.2215595029962,47.3197944922277,70.3222910417222,52.1520450515944,25.6880943980467,32.9364839324091,70.0002216758404,35.3459298086122,25.5561657727168,20.6932534477218,17.4492952163567,16.4888470587261,15.3731085116852,19.2492040936406,21.4549671887694,24.2572362066389,20.1596766752727,17.9939937196212,22.1426532924899,27.9562997757591,38.7670963261511,30.6844428728916,63.7176664031822,21.6074766177933,26.3021494559333,56.0157086875017,39.5704536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| ||
|EntrezGene=104303 | |||
|HGNC= | |||
|MCL_coexpression_id=1229 | |||
|UniProt=P61211,Q14AC7 | |||
|association_with_transcript=0bp_to_NM_025859,uc007grw.1_5end | |||
|description=CAGE_peak_2_at_Arl1_5end | |||
|id=chr10:88194149..88194168,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.58e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.52e-10!43;UBERON:0005409!2.46e-08!59;UBERON:0002108!3.02e-07!16;UBERON:0004119!4.94e-07!130;UBERON:0000925!4.94e-07!130;UBERON:0006595!4.94e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.75e-07,90 | |||
|phase1_expression=46.4431656603902,79.9153683494137,75.0748744992734,36.5981695681264,36.5653882860833,41.6340594341487,64.009863523174,10.2007425518845,23.7932940436317,16.6185813688615,27.3948749160808,23.6923312216149,8.9024379564227,8.91688104673774,7.32841475994458,7.89653542820321,5.59649502502517,15.6153771852328,11.2433835556706,16.5511964201232,22.1962987294292,18.7659897769673,28.470777016144,79.5162341283231,79.3756112492408,89.0059544378281,136.551552782427,116.569936883066,80.1898830105898,66.0318939971019,97.1179636670235,1.90509202037889,3.07532393792285,0,18.7753552838328,35.5742141067174,18.783580776138,19.2524550138978,30.4720784364282,28.2702821745851,12.3528612486513,18.442228093878,25.24653835762,105.87922391746,104.4182391561,82.7795852249184,4.69434806608824,16.7879370412944,29.6576346691537,30.1366343565139,26.5974201088189,20.125359011096,16.1071301815427,7.97898356212479,10.7550015725588,61.9995240846632,52.4356195087925,53.629897596854,6.06949382578793,12.6957835025288,16.4796164911607,22.0248945844936,27.5681386794453,20.2477436388315,9.88866362566974,29.1296847127901,10.4860038681442,3.84218305321555,8.91730665852908,9.58542162155004,8.62332341540666,16.8534080798244,20.7616428494517,7.7169203505421,7.09256485534949,9.19218786610021,20.9220173898839,25.5374676170375,24.4234387877427,13.7161739239402,13.0827330351446,18.7528813400434,35.177057874174,26.449842671489,24.7533161398432,11.1958862479994,16.5151149726959,17.5215479075783,65.7303358132038,37.6346369331792,47.8276406357768,63.6713668966226,50.9978500280813,45.3350680975766,53.9314426481565,51.9711189032909,38.2008822758365,85.0447309664508,104.433973850353,90.1015915001368,56.4782113304489,75.7126216744475,61.153257529595,28.4426681261332,41.9992619561755,34.9636614355636,32.8590889259609,39.2792546233566,22.7865337609511,20.1881309128162,23.0735484598961,21.3125834818499,28.1350906652391,30.2952507510771,32.5720718765902,30.2856485104518,32.8769307086717,25.8832848886642,13.2691582792481,45.7800185351168,22.7466764014205,35.8807687320064,37.2783522436244,21.958559775866,19.8974371472782,47.2595552135894,26.3593273913025,23.3962065087429,32.7841185848507,25.4644086988199,19.6725259212009,9.29842205635197,34.4172153980707,43.7273432034865,23.6878370797899,24.3361894601636,44.7074807302889,36.078021476927,42.9628689337247,26.0947901299228,17.566259799965,23.4500146522142,21.0672691872259,23.811361218043,22.3840082207869,22.163673609279,24.549851834649,23.2833033665114,15.5208954911646,17.5868654556072,20.586281527182,29.5914238777226,20.8535436919198,32.7357036530837,34.7771810529424,22.8889406841267,32.3018066164088,31.65379257511,30.689657934724,16.9843133479112,18.0585066185444,20.1669508836337,15.1516630774535,18.6926020160034,22.2144642557825,23.950996309292,26.8273401399619,25.9219060055116,31.2663714835613,35.2960047770055,29.2658402460539,30.2633973970438,28.3219648725455,28.0491415209177,28.8097229532854,18.1112117787541,53.1974240603915,47.8655525661015,18.3427895460301,19.5078804362768,25.9023597257408,22.5885547578144,28.0196335244537,34.4308383263732,36.0642086773829,49.2449874624793,49.7643713424534,48.744335650082,46.5964168214697,36.8515957548231,52.305408069676,54.5647088716966,20.863469104839,22.5069569841166,22.5415471346161,20.5687841123767,22.4984885114446,23.9864504024889,30.1638282082707,28.0459281161244,35.167715036468,37.5127378322274,64.6266727049985,12.346537822991,12.9728936774714,11.2431056192427,13.1859078902527,15.4353382241547,22.4070749567649,24.4541716833189,30.1571521801566,36.7912293672029,61.8203288067625,45.7733365632259,59.2871578917665,53.2941432468406,46.4639301021753,55.4810049567872,30.853782757823,21.7915123536057,23.7928865605358,24.2735472658519,30.2750420292168,22.6133447546451,30.2315423925237,34.3435220229726,34.8373668474682,38.0919266195893,39.5447826270568,41.6212819377975,39.717545829156,45.7091025117577,42.2215595029962,47.3197944922277,70.3222910417222,52.1520450515944,25.6880943980467,32.9364839324091,70.0002216758404,35.3459298086122,25.5561657727168,20.6932534477218,17.4492952163567,16.4888470587261,15.3731085116852,19.2492040936406,21.4549671887694,24.2572362066389,20.1596766752727,17.9939937196212,22.1426532924899,27.9562997757591,38.7670963261511,30.6844428728916,63.7176664031822,21.6074766177933,26.3021494559333,56.0157086875017,39.5704536460236,61.7944647367294,54.2699415653264,66.163138764906,58.822067433479,70.476197019687,89.605817288749,100.041476950741,67.40704193925,18.9064148732876,15.0056073187995,34.2939256050548,28.1970971491215,31.9280183507706,36.2007845324666,37.1447237919811,29.5686352160275,47.2385518026319,65.4969342223237,30.1741842882908,22.9279485908186,36.3083808067498,35.9310755449441,31.1867709515616,39.9328746182896,27.6283699995659,9.22702756308404,26.004745363366,18.8898417917106,9.41842285023455,9.84198439591381,11.2101304871196,27.1965487990168,23.9316983473455,27.5017947870803,45.8241896647254,18.0311516341247,28.0580864635051,31.32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| |||
|short_description=p2@Arl1 | |||
}} | |||
Revision as of 17:54, 12 September 2013
| Short description: | p2@Arl1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Arl1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1229 |
| Association with transcript: | 0bp_to_NM_025859, uc007grw.1_5end |
| EntrezGene: | Arl1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.58e-08 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| trunk | 3.75e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
