FFCP PHASE1:Hg19::chr2:30864128..30864141,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253558|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=26756|TSSclassifier=N|UniProt=|association_with_transcript=-331bp_to_AK023269_5end|coexpression_cluster_id=C102|description=CAGE_peak_8_at_LCLAT1_5end|id=chr2:30864128..30864141,+|ontology_enrichment_celltype=CL:0000066!4.60e-07!254|ontology_enrichment_celltype_v019=CL:0002615;5.96e-34;3!CL:0000333;4.21e-21;5!CL:0000136;5.70e-09;13!CL:0002321;5.55e-08;15|ontology_enrichment_celltype_v019_2=CL:0002615,5.96e-34,3;CL:0000136,5.93e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!7.45e-13!143;DOID:14566!4.20e-12!239;DOID:305!5.99e-11!106;DOID:162!6.70e-11!235|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0003688;9.07e-18;6!UBERON:0002358;9.07e-18;6!UBERON:0003684;9.07e-18;6!UBERON:0001178;9.07e-18;6!UBERON:0000010;2.19e-12;8!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0003688,9.07e-18,6;UBERON:0002358,9.07e-18,6;UBERON:0003684,9.07e-18,6;UBERON:0001178,9.07e-18,6;UBERON:0000010,2.19e-12,8;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12|phase1_expression=0,0.428201047781966,0,2.00146596706261,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0.243947412259191,0,0.348581828608555,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0.492434012174795,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0.176096868026452,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.482561763430822,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0.413509717453592,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0.371606350251437,0.28853842595289,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0.626719583092093,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0.269605053441981,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0.557694977114413,0,0,0.23056390438806,0.179515288819544,0.108647371922008,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.2088438990109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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=253558 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-331bp_to_AK023269_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_8_at_LCLAT1_5end | |||
|id=chr2:30864128..30864141,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.60e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002615;5.96e-34;3!CL:0000333;4.21e-21;5!CL:0000136;5.70e-09;13!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.96e-34,3;CL:0000136,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.45e-13!143;DOID:14566!4.20e-12!239;DOID:305!5.99e-11!106;DOID:162!6.70e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0003688;9.07e-18;6!UBERON:0002358;9.07e-18;6!UBERON:0003684;9.07e-18;6!UBERON:0001178;9.07e-18;6!UBERON:0000010;2.19e-12;8!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0003688,9.07e-18,6;UBERON:0002358,9.07e-18,6;UBERON:0003684,9.07e-18,6;UBERON:0001178,9.07e-18,6;UBERON:0000010,2.19e-12,8;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12 | |||
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| |||
|short_description=p8@LCLAT1 | |||
}} |
Revision as of 18:18, 12 September 2013
Short description: | p8@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -331bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.96e-34 | 3 |
fat cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
omentum | 9.07e-18 | 6 |
peritoneum | 9.07e-18 | 6 |
abdominal cavity | 9.07e-18 | 6 |
visceral peritoneum | 9.07e-18 | 6 |
peripheral nervous system | 2.19e-12 | 8 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.