FFCP PHASE1:Mm9::chr11:120353854..120353865,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=128|UniProt=|association_with_transcript=-146bp_to_ENSMUST00000142520_5end|description=CAGE_peak_1_at_ENSMUST00000142520_5end|id=chr11:120353854..120353865,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.88e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.20e-11!49;UBERON:0005173!3.20e-11!49;UBERON:0002417!3.20e-11!49;UBERON:0000916!3.20e-11!49;UBERON:0009569!3.39e-11!66;UBERON:0002107!1.37e-10!22;UBERON:0007499!1.37e-10!22;UBERON:0006925!1.37e-10!22;UBERON:0009497!1.37e-10!22;UBERON:0000015!1.37e-10!22;UBERON:0002423!1.37e-10!22;UBERON:0006235!1.37e-10!22;UBERON:0008835!1.37e-10!22;UBERON:0003894!1.37e-10!22;UBERON:0004161!1.37e-10!22;UBERON:0008836!1.37e-10!22;UBERON:0002365!2.91e-10!25;UBERON:0002330!2.91e-10!25;UBERON:0009854!6.25e-10!23;UBERON:0009856!6.25e-10!23;UBERON:0005177!1.48e-09!85;UBERON:0002100!2.58e-09!98;UBERON:0005256!8.69e-09!47;UBERON:0005911!6.26e-07!69;UBERON:0001007!6.83e-07!128;UBERON:0001555!6.83e-07!128;UBERON:0007026!6.83e-07!128;UBERON:0003104!8.13e-07!131;UBERON:0009142!8.13e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.50e-12,49;UBERON:0005173,1.50e-12,49;UBERON:0002417,1.50e-12,49;UBERON:0000916,1.50e-12,49;UBERON:0002113,2.25e-11,14;UBERON:0003918,2.25e-11,14;UBERON:0011143,2.25e-11,14;UBERON:0005095,2.25e-11,14;UBERON:0007687,2.25e-11,14;UBERON:0003104,4.99e-10,61;UBERON:0009142,4.99e-10,61;UBERON:0009569,3.03e-09,66;UBERON:0006554,6.29e-09,18;UBERON:0001008,1.78e-08,19;UBERON:0000489,1.07e-07,21;UBERON:0005177,1.15e-07,79;UBERON:0002107,1.33e-07,22;UBERON:0007499,1.33e-07,22;UBERON:0006925,1.33e-07,22;UBERON:0009497,1.33e-07,22;UBERON:0000015,1.33e-07,22;UBERON:0002423,1.33e-07,22;UBERON:0006235,1.33e-07,22;UBERON:0008835,1.33e-07,22;UBERON:0003894,1.33e-07,22;UBERON:0004161,1.33e-07,22;UBERON:0008836,1.33e-07,22;UBERON:0009854,2.76e-07,23;UBERON:0009856,2.76e-07,23|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0,0,0,0,1.1554064790051,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,2.15881276655127,3.89865850468601,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0.140271639780637,0.316182685621286,1.03327103585722,0.470996183524124,2.59134044235781,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.312037673114561,0.505157755894224,0.896987067609561,1.92977408545347,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.664394068946325,0,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0.777689839750757,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000142520}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|UniProt= | |||
|association_with_transcript=-146bp_to_ENSMUST00000142520_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000142520_5end | |||
|id=chr11:120353854..120353865,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.88e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.20e-11!49;UBERON:0005173!3.20e-11!49;UBERON:0002417!3.20e-11!49;UBERON:0000916!3.20e-11!49;UBERON:0009569!3.39e-11!66;UBERON:0002107!1.37e-10!22;UBERON:0007499!1.37e-10!22;UBERON:0006925!1.37e-10!22;UBERON:0009497!1.37e-10!22;UBERON:0000015!1.37e-10!22;UBERON:0002423!1.37e-10!22;UBERON:0006235!1.37e-10!22;UBERON:0008835!1.37e-10!22;UBERON:0003894!1.37e-10!22;UBERON:0004161!1.37e-10!22;UBERON:0008836!1.37e-10!22;UBERON:0002365!2.91e-10!25;UBERON:0002330!2.91e-10!25;UBERON:0009854!6.25e-10!23;UBERON:0009856!6.25e-10!23;UBERON:0005177!1.48e-09!85;UBERON:0002100!2.58e-09!98;UBERON:0005256!8.69e-09!47;UBERON:0005911!6.26e-07!69;UBERON:0001007!6.83e-07!128;UBERON:0001555!6.83e-07!128;UBERON:0007026!6.83e-07!128;UBERON:0003104!8.13e-07!131;UBERON:0009142!8.13e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.50e-12,49;UBERON:0005173,1.50e-12,49;UBERON:0002417,1.50e-12,49;UBERON:0000916,1.50e-12,49;UBERON:0002113,2.25e-11,14;UBERON:0003918,2.25e-11,14;UBERON:0011143,2.25e-11,14;UBERON:0005095,2.25e-11,14;UBERON:0007687,2.25e-11,14;UBERON:0003104,4.99e-10,61;UBERON:0009142,4.99e-10,61;UBERON:0009569,3.03e-09,66;UBERON:0006554,6.29e-09,18;UBERON:0001008,1.78e-08,19;UBERON:0000489,1.07e-07,21;UBERON:0005177,1.15e-07,79;UBERON:0002107,1.33e-07,22;UBERON:0007499,1.33e-07,22;UBERON:0006925,1.33e-07,22;UBERON:0009497,1.33e-07,22;UBERON:0000015,1.33e-07,22;UBERON:0002423,1.33e-07,22;UBERON:0006235,1.33e-07,22;UBERON:0008835,1.33e-07,22;UBERON:0003894,1.33e-07,22;UBERON:0004161,1.33e-07,22;UBERON:0008836,1.33e-07,22;UBERON:0009854,2.76e-07,23;UBERON:0009856,2.76e-07,23 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0,0,0,0,1.1554064790051,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,2.15881276655127,3.89865850468601,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0.667134131534611,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,1.1270773567308,0,0,0.140271639780637,0.316182685621286,1.03327103585722,0.470996183524124,2.59134044235781,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.312037673114561,0.505157755894224,0.896987067609561,1.92977408545347,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.664394068946325,0,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0.777689839750757,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0,0,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000142520 | |||
}} |
Revision as of 19:05, 12 September 2013
Short description: | p1@ENSMUST00000142520 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000142520_5end |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | -146bp_to_ENSMUST00000142520_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.88e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.50e-12 | 49 |
abdominal segment element | 1.50e-12 | 49 |
abdominal segment of trunk | 1.50e-12 | 49 |
abdomen | 1.50e-12 | 49 |
kidney | 2.25e-11 | 14 |
kidney mesenchyme | 2.25e-11 | 14 |
upper urinary tract | 2.25e-11 | 14 |
kidney rudiment | 2.25e-11 | 14 |
kidney field | 2.25e-11 | 14 |
mesenchyme | 4.99e-10 | 61 |
entire embryonic mesenchyme | 4.99e-10 | 61 |
subdivision of trunk | 3.03e-09 | 66 |
urinary system structure | 6.29e-09 | 18 |
renal system | 1.78e-08 | 19 |
cavitated compound organ | 1.07e-07 | 21 |
trunk region element | 1.15e-07 | 79 |
liver | 1.33e-07 | 22 |
epithelial sac | 1.33e-07 | 22 |
digestive gland | 1.33e-07 | 22 |
epithelium of foregut-midgut junction | 1.33e-07 | 22 |
anatomical boundary | 1.33e-07 | 22 |
hepatobiliary system | 1.33e-07 | 22 |
foregut-midgut junction | 1.33e-07 | 22 |
hepatic diverticulum | 1.33e-07 | 22 |
liver primordium | 1.33e-07 | 22 |
septum transversum | 1.33e-07 | 22 |
liver bud | 1.33e-07 | 22 |
digestive tract diverticulum | 2.76e-07 | 23 |
sac | 2.76e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.