FFCP PHASE1:Mm9::chr11:120535011..120535030,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68938|HGNC=|MCL_coexpression_id=74|UniProt=A2ABZ8|association_with_transcript=305bp_to_ENSMUST00000149389_5end|description=CAGE_peak_6_at_Aspscr1_5end|id=chr11:120535011..120535030,+|ontology_enrichment_celltype=CL:0002563!4.07e-10!9;CL:0002251!4.07e-10!9;CL:0000066!1.88e-07!25;CL:0000239!1.92e-07!6;CL:0000677!1.92e-07!6;CL:0000212!1.92e-07!6;CL:0000584!1.92e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,5.68e-12,6;CL:0000677,5.68e-12,6;CL:0000584,5.68e-12,6;CL:0002563,6.58e-12,9;CL:0002251,6.58e-12,9;CL:0000075,2.79e-10,7;CL:0000223,3.15e-07,20;CL:0002076,4.63e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.77e-16!15;UBERON:0000160!2.17e-15!43;UBERON:0001242!1.78e-14!13;UBERON:0000060!1.78e-14!13;UBERON:0001262!1.78e-14!13;UBERON:0004786!1.78e-14!13;UBERON:0005409!2.52e-12!59;UBERON:0004923!2.80e-12!24;UBERON:0003350!4.07e-10!9;UBERON:0004808!4.07e-10!9;UBERON:0001277!4.07e-10!9;UBERON:0004119!7.63e-09!130;UBERON:0000925!7.63e-09!130;UBERON:0006595!7.63e-09!130;UBERON:0001007!6.37e-08!128;UBERON:0001555!6.37e-08!128;UBERON:0007026!6.37e-08!128;UBERON:0000485!8.26e-08!11;UBERON:0004921!5.90e-07!126;UBERON:0004185!5.90e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.11e-33,31;UBERON:0005409,8.25e-27,47;UBERON:0000344,9.97e-22,15;UBERON:0001242,3.25e-20,13;UBERON:0001262,3.25e-20,13;UBERON:0004786,3.25e-20,13;UBERON:0004923,4.20e-13,24;UBERON:0003350,6.58e-12,9;UBERON:0004808,6.58e-12,9;UBERON:0001277,6.58e-12,9;UBERON:0001007,1.01e-11,116;UBERON:0001555,1.01e-11,116;UBERON:0007026,1.01e-11,116;UBERON:0004119,1.81e-11,118;UBERON:0000925,1.81e-11,118;UBERON:0006595,1.81e-11,118;UBERON:0004921,1.27e-10,114;UBERON:0002108,6.31e-10,4;UBERON:0000485,1.04e-09,11;UBERON:0001155,3.56e-09,2;UBERON:0000059,3.56e-09,2|phase1_expression=0,3.83872948403297,1.81999695755814,7.56160528267075,5.50985302940982,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,2.28028103347649,0.756090389279792,1.33038306393183,0,0,0,1.44425809875637,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,32.711459515396,5.02456076660734,0,0,0,0,0.22237804384487,0.190225626112559,4.74529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.58489226135736,5.39291645192533,4.75503709724327,5.77509692437665,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.517434735131018,0,0,0.178368817602071,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0.16488625294148,0,0.301564624640779,0.835606408021955,0.328281799490123,3.49777003955821,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0,1.29614973291793,0,6.20062232552609,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0|short_description=p6@Aspscr1}} | ||
|EntrezGene=68938 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=A2ABZ8 | |||
|association_with_transcript=305bp_to_ENSMUST00000149389_5end | |||
|description=CAGE_peak_6_at_Aspscr1_5end | |||
|id=chr11:120535011..120535030,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.07e-10!9;CL:0002251!4.07e-10!9;CL:0000066!1.88e-07!25;CL:0000239!1.92e-07!6;CL:0000677!1.92e-07!6;CL:0000212!1.92e-07!6;CL:0000584!1.92e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.68e-12,6;CL:0000677,5.68e-12,6;CL:0000584,5.68e-12,6;CL:0002563,6.58e-12,9;CL:0002251,6.58e-12,9;CL:0000075,2.79e-10,7;CL:0000223,3.15e-07,20;CL:0002076,4.63e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.77e-16!15;UBERON:0000160!2.17e-15!43;UBERON:0001242!1.78e-14!13;UBERON:0000060!1.78e-14!13;UBERON:0001262!1.78e-14!13;UBERON:0004786!1.78e-14!13;UBERON:0005409!2.52e-12!59;UBERON:0004923!2.80e-12!24;UBERON:0003350!4.07e-10!9;UBERON:0004808!4.07e-10!9;UBERON:0001277!4.07e-10!9;UBERON:0004119!7.63e-09!130;UBERON:0000925!7.63e-09!130;UBERON:0006595!7.63e-09!130;UBERON:0001007!6.37e-08!128;UBERON:0001555!6.37e-08!128;UBERON:0007026!6.37e-08!128;UBERON:0000485!8.26e-08!11;UBERON:0004921!5.90e-07!126;UBERON:0004185!5.90e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.11e-33,31;UBERON:0005409,8.25e-27,47;UBERON:0000344,9.97e-22,15;UBERON:0001242,3.25e-20,13;UBERON:0001262,3.25e-20,13;UBERON:0004786,3.25e-20,13;UBERON:0004923,4.20e-13,24;UBERON:0003350,6.58e-12,9;UBERON:0004808,6.58e-12,9;UBERON:0001277,6.58e-12,9;UBERON:0001007,1.01e-11,116;UBERON:0001555,1.01e-11,116;UBERON:0007026,1.01e-11,116;UBERON:0004119,1.81e-11,118;UBERON:0000925,1.81e-11,118;UBERON:0006595,1.81e-11,118;UBERON:0004921,1.27e-10,114;UBERON:0002108,6.31e-10,4;UBERON:0000485,1.04e-09,11;UBERON:0001155,3.56e-09,2;UBERON:0000059,3.56e-09,2 | |||
|phase1_expression=0,3.83872948403297,1.81999695755814,7.56160528267075,5.50985302940982,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.27993938234725,0.68822784320151,0.57423196411502,0.86152399231815,0.646413698057667,2.28028103347649,0.756090389279792,1.33038306393183,0,0,0,1.44425809875637,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.78819938646014,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,32.711459515396,5.02456076660734,0,0,0,0,0.22237804384487,0.190225626112559,4.74529061544512,0.658795818896044,0.502670417600539,0.198956472041151,0.58489226135736,5.39291645192533,4.75503709724327,5.77509692437665,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.517434735131018,0,0,0.178368817602071,0,0,0.469343416127421,0.42366414172764,0.220528398054962,0.16488625294148,0,0.301564624640779,0.835606408021955,0.328281799490123,3.49777003955821,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0,1.29614973291793,0,6.20062232552609,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p6@Aspscr1 | |||
}} |
Revision as of 19:07, 12 September 2013
Short description: | p6@Aspscr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Aspscr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 305bp_to_ENSMUST00000149389_5end |
EntrezGene: | Aspscr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.68e-12 | 6 |
gut absorptive cell | 5.68e-12 | 6 |
enterocyte | 5.68e-12 | 6 |
intestinal epithelial cell | 6.58e-12 | 9 |
epithelial cell of alimentary canal | 6.58e-12 | 9 |
columnar/cuboidal epithelial cell | 2.79e-10 | 7 |
endodermal cell | 3.15e-07 | 20 |
endo-epithelial cell | 4.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.11e-33 | 31 |
gastrointestinal system | 8.25e-27 | 47 |
mucosa | 9.97e-22 | 15 |
intestinal mucosa | 3.25e-20 | 13 |
wall of intestine | 3.25e-20 | 13 |
gastrointestinal system mucosa | 3.25e-20 | 13 |
organ component layer | 4.20e-13 | 24 |
epithelium of mucosa | 6.58e-12 | 9 |
gastrointestinal system epithelium | 6.58e-12 | 9 |
intestinal epithelium | 6.58e-12 | 9 |
digestive system | 1.01e-11 | 116 |
digestive tract | 1.01e-11 | 116 |
primitive gut | 1.01e-11 | 116 |
endoderm-derived structure | 1.81e-11 | 118 |
endoderm | 1.81e-11 | 118 |
presumptive endoderm | 1.81e-11 | 118 |
subdivision of digestive tract | 1.27e-10 | 114 |
small intestine | 6.31e-10 | 4 |
simple columnar epithelium | 1.04e-09 | 11 |
colon | 3.56e-09 | 2 |
large intestine | 3.56e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.