FFCP PHASE1:Hg19::chr2:58274001..58274016,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7444|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12719|TSSclassifier=S|UniProt=E7ERS5|association_with_transcript=0bp_to_ENST00000428021_5end|description=CAGE_peak_3_at_VRK2_5end|id=chr2:58274001..58274016,+|ontology_enrichment_celltype=CL:0000066!4.66e-12!254;CL:0000012!9.72e-10!682;CL:0000223!2.16e-09!59;CL:0000548!6.26e-09!679;CL:0000004!6.26e-09!679;CL:0000255!6.26e-09!679;CL:0000063!1.55e-08!578;CL:0002076!2.19e-08!43|ontology_enrichment_celltype_v019=CL:0002076;4.00e-09;42|ontology_enrichment_celltype_v019_2=CL:0000223,1.68e-12,58;CL:0002076,2.73e-11,42;CL:0000066,5.35e-10,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.55e-25!235;DOID:14566!9.28e-24!239;DOID:305!1.50e-21!106;DOID:0050687!1.45e-20!143;DOID:0050686!5.74e-11!137;DOID:299!1.81e-07!25;DOID:2531!3.45e-07!51;DOID:0060083!3.45e-07!51|ontology_enrichment_disease_v019=DOID:299;7.18e-07;25|ontology_enrichment_disease_v019_2=DOID:305,1.91e-18,106;DOID:162,8.96e-18,235;DOID:14566,6.51e-17,239;DOID:0050687,2.61e-16,143;DOID:0050686,5.70e-09,137;DOID:299,3.37e-07,25|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.495065411840187,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0.410623275218653,0.251085279189606,5.88383224259225,6.65014774544561,6.53299484903538,0.393364276848904,0,0.309632246632152,0,1.8072355126695,2.58827807116751,2.86628642147116,2.13253848731132,0.587200878669695,0.553995408531877,0.601633342410425,0.217010870715852,0.223915474239924,0.32389366601898,0,1.01778767145695,0.377875943688809,0.970336244751265,0.232429036905685,0.822335776043652,1.23882548358041,1.1507695692886,0.768482119587302,0.945928919554341,0.344745680736619,2.5819387343353,1.35426486594342,0.564727018627814,1.36453075028923,2.47195832889593,0.918251677112708,0.320929027076094,0.639337125799041,1.31940520074686,0.997318288108159,1.27867425159808,1.45104619314292,0,1.24564449799115,1.50749199154046,1.0429658368404,1.08594422352558,0.605399502633369,0.736555271975129,0.949387162322653,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0,0,0,0,0.365328307529268,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.1384259382189,0,0.382273228125229,1.32171328579026,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0,0.383220493601921,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0.255973222308837,1.24930726552346,0,0,0.80642697289893,0,0.434473211648397,0,0,0.383587685530591,1.44575660953827,1.00267582127178,1.88300474649071,0,0,0.567208902984407,0.221729397462564,0.790513071238134,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.79504962946682,0,0.347140501607594,0,0.419499436209906,1.37559020970034,0.417989933073621,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,1.47065232138347,1.62028389576352,1.07159673940896,1.57170560838319,1.0135033243499,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0,0,0,0,0,0,0.622422070799533,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.352303495931295,0,0,0.61246251376468,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.625592599359821,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0,0.600182192168805,0.309157587715317,0,0.558350568994769,0,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.403008392910561,0,0.966304265816484,2.18196896472668,1.43402297694502,0.853815942907168,1.32529768321485,1.04574548582567,0.725627385107593,2.27088765788066,4.37972830890996,0,0,0,0,0,0.591534000199219,0.168584690078102,0.964044119533928,0.661763836394364,0.435758888184812,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,1.10689594688802,0.514703430895577,0,0,0.603173834469785,0.833296006426766,0,0,0,0.231860809950154,0.234817388471643,0.577465791044295,0,0.761016608938393,0,0.858486162094873,0,0,0.297262324577456,0,2.68771405118175,0.992425680696705,1.70161193135412,2.3250715081117,1.15014803749563,0.492663237895943,0.176096868026452,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0,0,0,0.65147236858747,0,1.58390374586686,0,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,0,2.85273810081437,0,0.410952645100767,0.358121926479791,1.00876629594175,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.36807447515742,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0,0.184369168541703,0.434418072340414,0,0,0,0.215714200818617,0.106727557803444,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12719 | |||
|TSSclassifier=S | |||
|UniProt=E7ERS5 | |||
|association_with_transcript=0bp_to_ENST00000428021_5end | |||
|description=CAGE_peak_3_at_VRK2_5end | |||
|id=chr2:58274001..58274016,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.66e-12!254;CL:0000012!9.72e-10!682;CL:0000223!2.16e-09!59;CL:0000548!6.26e-09!679;CL:0000004!6.26e-09!679;CL:0000255!6.26e-09!679;CL:0000063!1.55e-08!578;CL:0002076!2.19e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.00e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.68e-12,58;CL:0002076,2.73e-11,42;CL:0000066,5.35e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.55e-25!235;DOID:14566!9.28e-24!239;DOID:305!1.50e-21!106;DOID:0050687!1.45e-20!143;DOID:0050686!5.74e-11!137;DOID:299!1.81e-07!25;DOID:2531!3.45e-07!51;DOID:0060083!3.45e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:299;7.18e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.91e-18,106;DOID:162,8.96e-18,235;DOID:14566,6.51e-17,239;DOID:0050687,2.61e-16,143;DOID:0050686,5.70e-09,137;DOID:299,3.37e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@VRK2 | |||
}} |
Revision as of 19:07, 12 September 2013
Short description: | p3@VRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_VRK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428021_5end |
EntrezGene: | VRK2 |
HGNC: | 12719 |
UniProt: | E7ERS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.68e-12 | 58 |
endo-epithelial cell | 2.73e-11 | 42 |
epithelial cell | 5.35e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.91e-18 | 106 |
cancer | 8.96e-18 | 235 |
disease of cellular proliferation | 6.51e-17 | 239 |
cell type cancer | 2.61e-16 | 143 |
organ system cancer | 5.70e-09 | 137 |
adenocarcinoma | 3.37e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.