FFCP PHASE1:Mm9::chr11:4118258..4118282,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71962|HGNC=|MCL_coexpression_id=2668|UniProt=Q9CWQ8|association_with_transcript=4bp_to_NM_028022,uc007hur.1_5end|description=CAGE_peak_1_at_Gatsl3_5end|id=chr11:4118258..4118282,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0.233612640595526,11.879345756625,3.37892933164,3.7450324211519,0.856089841127525,0.159544317990673,4.79362043807376,6.55653018142481,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,0.959801035240171,1.27316895539409,4.59233766815777,0,0,1.75991665072747,1.37645568640302,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,1.67412652294763,3.1253413780952,1.0470474879476,3.52938892818609,2.04913645487534,1.94204141212461,16.6183799727762,14.6996550268296,5.68994931701213,54.7673941043627,54.7243142514921,66.7845995512794,48.8019046676451,43.9557363903638,63.2511283205875,0.838913030288682,3.62681071005672,0.672187598284928,15.4355661621568,10.0286703978565,13.4074743992135,0.202316460859598,0,1.26766280701236,13.5537812827653,15.1180115338894,5.84934816232909,3.9554654502679,2.1314403448383,14.6804054154018,14.2160772968975,0.103689612308478,0.540023753326763,0,10.5690864229407,7.06779331045163,0.122490799214954,0,0,5.50579404996943,3.31987079021488,2.91852413186863,0.527545150920775,0.365950574409639,0,7.81712397203867,3.37657566019008,4.5839474333043,2.65165726926301,4.27115042397309,0.559198337475902,1.74170244666323,3.40072020480535,11.0148505706638,0,0,1.07940638327563,1.94932925234301,1.79210754838934,2.80888840263504,2.89731548382698,1.81850203222008,4.94675404314476,3.52108549441701,0,0,0,23.5975234702223,25.3359865475099,28.3093689208279,2.2836775943812,3.6251303710604,2.22663208597237,1.73485326766136,3.65358573974569,3.22861696158482,3.46662073271032,2.70454026412121,2.01066546127481,24.9666917411718,6.50697106139602,0.884610551949874,4.20593809863264,2.87093973998512,2.90925151881133,0,1.46390398505774,2.51336048176146,1.53274233125155,0.718890747035522,1.19980546198682,0.635351135365324,5.24267237916879,5.03250663100489,0.879580464790051,2.25971616249959,2.81287003063364,4.98691306942944,3.89379031362618,2.64782346010822,3.11017426525233,2.52722758433675,2.52530227063769,0.130120442962704,0.689706313300419,0.180062129805349,3.0140963567143,2.99360596265843,3.20284300712124,1.87403449119458,3.62184719034622,0.431135985865684,0.378212160335639,1.75951124163949,3.72632745126877,2.22437799380478,4.52727816478817,6.58502836505419,1.19420560091096,0.702213187313235,0.257347907114715,0.568326998791185,0.621377317606506,2.11073453982987,1.08037236876609,1.65721314909647,2.16440654922144,1.69693824176116,2.32533944750408,1.87791380979733,5.02090972178829,0.987359099480883,3.61168420974009,6.08016071593918,5.11699955988663,4.17145219052996,6.57611451925822,3.15434922846191,1.64647379806855,0.660837565967596,1.32225283331772,0,0.464473343720877,0.644337306610467,1.21010114774006,3.7804267453628,7.60902504450237,1.89811624617805,9.88193728344065,3.2673577144035,4.57599885694647,4.09424582950152,1.79763881730844,0.864552199498777,1.1948476395262,1.89667900953082,1.14248512609729,2.25415471346161,0.610953983535943,1.35766741017338,1.26244475802573,2.59269802209455,3.69025369949005,4.08196692387575,4.68909222902842,1.77871576252289,0.333690211432188,1.57247196090562,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,1.86070473834252,1.5601883655728,2.27320990152401,1.25578189465339,1.92977408545347,7.39012760666419,0.37898282354097,0.325929952884052,0,0.704070744865506,3.01511263395268,4.52282917683426,4.68320754858717,2.20689201748667,3.76489972402917,3.98636921643718,8.02930242107116,6.38934432903814,7.95569822198314,1.50791283939272,1.08781136763742,1.47529281905711,3.58717770196152,10.1146871692309,6.44664276257117,2.13115428989678,7.32165688892682,1.57754109708128,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,1.46127928955656,1.58115111178609,4.4984984299053,3.83238230062325,3.38324646967785,2.60619134965722,6.76377504187395,0,0.242780636154981,0.604647113929502,0,1.18120757152309,2.15204603560749,3.6179961043551,1.09060118843252,2.85197902707777,3.47640433729398,1.05418608574999,4.12542172992747,2.7235168460303,0,0.517434735131018,1.50035924522115,2.48276327099183,2.85390108163313,4.27827453565514,8.52501857520878,30.0379786321549,44.2729028105384,3.52845436887939,7.91454014119104,6.62004149453213,7.53911561601948,8.47543642422269,7.87876318776294,1.45740418314925,10.9400928186201,1.02522528478712,1.44470807574256,0.740778109478847,0.753473828018764,0.820165366326151,1.83022538565218,4.07948231985253,3.49878630809145,4.28419918793714,8.59203556213602,0.158167996790568,0.813277868507395,1.18805874903981,2.09088296014469,1.9652630737156,3.37160865962052,3.96736587481612,3.92633912976044,2.72191443912765,9.32008969630389,6.76431526421028,2.24274819065968,4.13646226142744,1.75006069509643,2.84151611651008,3.54807863530634,2.69921648885234,2.73429208172295,4.29923312145414,5.07326653734613,2.59227005632079,8.21628913633263,15.4071163620525,33.0729282070744,39.4959301852497,26.8540043501222,26.0272574763457,21.1543991155145,16.5412270435526,11.9140410938814,12.1930890648,13.914013548884,11.3051141658113,10.2946670555153,10.6357980985228,6.34845074122592,25.0844127312693,32.7455576624586,70.1757696401848,5.21611903886914,3.75364950902364,2.19781949120718,15.8632600518509,4.01257683228291,1.12950368523413,2.30162618253588,3.43737308063638,2.57779773515531,1.37016503954128,0,1.35004500046361,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0,1.36586884603307,2.67417388775123,1.88651846365184,3.12533964365024,2.22246727801615,3.09052585858341,3.20919209591815,2.52697211763797,3.04175159868288,2.26351609663291,2.06011316433741,2.94515701062399,2.5845961030026,5.71552429539688,2.31768651889711,1.35036454324594,1.64834360321323,2.20798380201596,3.77156177623957,2.30718548007139,2.14592570952589,2.90692833264657,2.25862512996793,3.46919892355874,2.56099162021882,2.63069711437843,2.58027816307137,3.36685362994643,2.37270036248348,1.87158516513571,2.86461730218783,3.56354734727722,4.62975866354739,5.74564329257276,6.78401664491684,5.15690529715916,10.1382815996487,6.61774257358547,4.40548887678801|short_description=p1@Gatsl3}} | ||
|EntrezGene=71962 | |||
|HGNC= | |||
|MCL_coexpression_id=2668 | |||
|UniProt=Q9CWQ8 | |||
|association_with_transcript=4bp_to_NM_028022,uc007hur.1_5end | |||
|description=CAGE_peak_1_at_Gatsl3_5end | |||
|id=chr11:4118258..4118282,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.60148847104794,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.16787927191189,0.233612640595526,11.879345756625,3.37892933164,3.7450324211519,0.856089841127525,0.159544317990673,4.79362043807376,6.55653018142481,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,0.959801035240171,1.27316895539409,4.59233766815777,0,0,1.75991665072747,1.37645568640302,0.57423196411502,0,0.430942465371778,0.950117097281869,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,1.67412652294763,3.1253413780952,1.0470474879476,3.52938892818609,2.04913645487534,1.94204141212461,16.6183799727762,14.6996550268296,5.68994931701213,54.7673941043627,54.7243142514921,66.7845995512794,48.8019046676451,43.9557363903638,63.2511283205875,0.838913030288682,3.62681071005672,0.672187598284928,15.4355661621568,10.0286703978565,13.4074743992135,0.202316460859598,0,1.26766280701236,13.5537812827653,15.1180115338894,5.84934816232909,3.9554654502679,2.1314403448383,14.6804054154018,14.2160772968975,0.103689612308478,0.540023753326763,0,10.5690864229407,7.06779331045163,0.122490799214954,0,0,5.50579404996943,3.31987079021488,2.91852413186863,0.527545150920775,0.365950574409639,0,7.81712397203867,3.37657566019008,4.5839474333043,2.65165726926301,4.27115042397309,0.559198337475902,1.74170244666323,3.40072020480535,11.0148505706638,0,0,1.07940638327563,1.94932925234301,1.79210754838934,2.80888840263504,2.89731548382698,1.81850203222008,4.94675404314476,3.52108549441701,0,0,0,23.5975234702223,25.3359865475099,28.3093689208279,2.2836775943812,3.6251303710604,2.22663208597237,1.73485326766136,3.65358573974569,3.22861696158482,3.46662073271032,2.70454026412121,2.01066546127481,24.9666917411718,6.50697106139602,0.884610551949874,4.20593809863264,2.87093973998512,2.90925151881133,0,1.46390398505774,2.51336048176146,1.53274233125155,0.718890747035522,1.19980546198682,0.635351135365324,5.24267237916879,5.03250663100489,0.879580464790051,2.25971616249959,2.81287003063364,4.98691306942944,3.89379031362618,2.64782346010822,3.11017426525233,2.52722758433675,2.52530227063769,0.130120442962704,0.689706313300419,0.180062129805349,3.0140963567143,2.99360596265843,3.20284300712124,1.87403449119458,3.62184719034622,0.431135985865684,0.378212160335639,1.75951124163949,3.72632745126877,2.22437799380478,4.52727816478817,6.58502836505419,1.19420560091096,0.702213187313235,0.257347907114715,0.568326998791185,0.621377317606506,2.11073453982987,1.08037236876609,1.65721314909647,2.16440654922144,1.69693824176116,2.32533944750408,1.87791380979733,5.02090972178829,0.987359099480883,3.61168420974009,6.08016071593918,5.11699955988663,4.17145219052996,6.57611451925822,3.15434922846191,1.64647379806855,0.660837565967596,1.32225283331772,0,0.464473343720877,0.644337306610467,1.21010114774006,3.7804267453628,7.60902504450237,1.89811624617805,9.88193728344065,3.2673577144035,4.57599885694647,4.09424582950152,1.79763881730844,0.864552199498777,1.1948476395262,1.89667900953082,1.14248512609729,2.25415471346161,0.610953983535943,1.35766741017338,1.26244475802573,2.59269802209455,3.69025369949005,4.08196692387575,4.68909222902842,1.77871576252289,0.333690211432188,1.57247196090562,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,1.86070473834252,1.5601883655728,2.27320990152401,1.25578189465339,1.92977408545347,7.39012760666419,0.37898282354097,0.325929952884052,0,0.704070744865506,3.01511263395268,4.52282917683426,4.68320754858717,2.20689201748667,3.76489972402917,3.98636921643718,8.02930242107116,6.38934432903814,7.95569822198314,1.50791283939272,1.08781136763742,1.47529281905711,3.58717770196152,10.1146871692309,6.44664276257117,2.13115428989678,7.32165688892682,1.57754109708128,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,1.46127928955656,1.58115111178609,4.4984984299053,3.83238230062325,3.38324646967785,2.60619134965722,6.76377504187395,0,0.242780636154981,0.604647113929502,0,1.18120757152309,2.15204603560749,3.6179961043551,1.09060118843252,2.85197902707777,3.47640433729398,1.05418608574999,4.12542172992747,2.7235168460303,0,0.517434735131018,1.50035924522115,2.48276327099183,2.85390108163313,4.27827453565514,8.52501857520878,30.0379786321549,44.2729028105384,3.52845436887939,7.91454014119104,6.62004149453213,7.53911561601948,8.47543642422269,7.87876318776294,1.45740418314925,10.9400928186201,1.02522528478712,1.44470807574256,0.740778109478847,0.753473828018764,0.820165366326151,1.83022538565218,4.07948231985253,3.49878630809145,4.28419918793714,8.59203556213602,0.158167996790568,0.813277868507395,1.18805874903981,2.09088296014469,1.9652630737156,3.37160865962052,3.96736587481612,3.92633912976044,2.72191443912765,9.32008969630389,6.76431526421028,2.24274819065968,4.13646226142744,1.75006069509643,2.84151611651008,3.54807863530634,2.69921648885234,2.73429208172295,4.29923312145414,5.07326653734613,2.59227005632079,8.21628913633263,15.4071163620525,33.0729282070744,39.4959301852497,26.8540043501222,26.0272574763457,21.1543991155145,16.5412270435526,11.9140410938814,12.1930890648,13.914013548884,11.3051141658113,10.2946670555153,10.6357980985228,6.34845074122592,25.0844127312693,32.7455576624586,70.1757696401848,5.21611903886914,3.75364950902364,2.19781949120718,15.8632600518509,4.01257683228291,1.12950368523413,2.30162618253588,3.43737308063638,2.57779773515531,1.37016503954128,0,1.35004500046361,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0,1.36586884603307,2.67417388775123,1.88651846365184,3.12533964365024,2.22246727801615,3.09052585858341,3.20919209591815,2.52697211763797,3.04175159868288,2.26351609663291,2.06011316433741,2.94515701062399,2.5845961030026,5.71552429539688,2.31768651889711,1.35036454324594,1.64834360321323,2.20798380201596,3.77156177623957,2.30718548007139,2.14592570952589,2.90692833264657,2.25862512996793,3.46919892355874,2.56099162021882,2.63069711437843,2.58027816307137,3.36685362994643,2.37270036248348,1.87158516513571,2.86461730218783,3.56354734727722,4.62975866354739,5.74564329257276,6.78401664491684,5.15690529715916,10.1382815996487,6.61774257358547,4.40548887678801 | |||
|short_description=p1@Gatsl3 | |||
}} | |||
Revision as of 19:38, 12 September 2013
| Short description: | p1@Gatsl3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gatsl3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2668 |
| Association with transcript: | 4bp_to_NM_028022, uc007hur.1_5end |
| EntrezGene: | Gatsl3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
