FFCP PHASE1:Mm9::chr11:4164303..4164316,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:4164303..4164316,+|id=chr11:4164303..4164316,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000072,3.59e-08,27|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.22665955842614,8.61423542615335,6.0662933401774,0,0,0,0,0,0.461230994512117,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0.790575555893047,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.65954501176592,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.629156066554265,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p@chr11:4164303..4164316,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:4164303..4164316,+ | |||
|id=chr11:4164303..4164316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000072,3.59e-08,27 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.22665955842614,8.61423542615335,6.0662933401774,0,0,0,0,0,0.461230994512117,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0.790575555893047,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.65954501176592,0,0.120625849856312,0,0.328281799490123,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.629156066554265,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:4164303..4164316,+ | |||
}} |
Revision as of 19:38, 12 September 2013
Short description: | p@chr11:4164303..4164316, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4164303..4164316, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of tracheobronchial tree | 1.33e-65 | 3 |
branched duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of lower respiratory tract | 1.33e-65 | 3 |
respiratory epithelial cell | 1.33e-65 | 3 |
tracheal epithelial cell | 1.33e-65 | 3 |
tracheoblast | 1.33e-65 | 3 |
endo-epithelial cell | 5.35e-14 | 15 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.33e-65 | 3 |
respiratory airway | 1.33e-65 | 3 |
tracheobronchial tree | 1.33e-65 | 3 |
lower respiratory tract | 1.33e-65 | 3 |
thoracic cavity element | 1.84e-12 | 17 |
thoracic segment organ | 1.84e-12 | 17 |
thoracic cavity | 1.84e-12 | 17 |
thoracic segment of trunk | 1.84e-12 | 17 |
respiratory primordium | 1.84e-12 | 17 |
endoderm of foregut | 1.84e-12 | 17 |
segment of respiratory tract | 3.59e-08 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.