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FFCP PHASE1:Mm9::chr11:44284081..44284108,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:44284081..44284108,+|id=chr11:44284081..44284108,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,4.76e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,7.03e-07,6|ontology_enrichment_uberon=UBERON:0002193!6.35e-08!48;UBERON:0002390!6.37e-08!45;UBERON:0003061!6.37e-08!45;UBERON:0004177!2.86e-07!29;UBERON:0002405!3.32e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-11,29;UBERON:0005057,1.88e-11,29;UBERON:0003408,5.58e-10,24;UBERON:0000077,6.88e-10,35;UBERON:0002390,1.09e-09,45;UBERON:0003061,1.09e-09,45;UBERON:0002193,1.48e-09,48;UBERON:0002405,1.48e-09,48;UBERON:0000072,2.49e-09,27;UBERON:0002370,4.65e-09,23;UBERON:0000974,4.65e-09,23;UBERON:0004807,4.65e-09,23;UBERON:0005058,4.65e-09,23;UBERON:0003351,4.65e-09,23;UBERON:0009113,4.65e-09,23;UBERON:0003295,4.65e-09,23;UBERON:0009722,4.65e-09,23;UBERON:0005562,4.65e-09,23;UBERON:0007690,4.65e-09,23;UBERON:0006562,1.61e-08,24;UBERON:0001557,1.61e-08,24;UBERON:0001042,1.61e-08,24;UBERON:0008814,1.61e-08,24;UBERON:0009145,1.61e-08,24;UBERON:0002368,3.35e-08,60;UBERON:0002530,6.97e-08,65;UBERON:0001041,4.79e-07,80;UBERON:0000949,5.50e-07,72;UBERON:0001004,7.29e-07,42|phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.467225281191051,5.16493293766305,0.703943610758334,0.70219357896598,1.36974374580404,0.797721589953364,2.56801094896809,4.19617931611188,0.999329285446988,0.404950534779652,0.699561878128147,2.5236973228659,2.60517423850904,2.97072756258621,0.340173160604279,0.397163804803541,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0,3.81018404075779,3.07532393792285,0,0.288851619751275,0,0.408338712524738,12.5559489221072,6.2506827561904,5.75876118371178,30.5880373776127,8.19654581950135,13.1087795318411,0.629484089877886,0.608261587317087,1.46837401729345,0,0,0,0.777719596297134,0.139986421625363,0,6.20795642413625,2.90144856804538,1.00828139742739,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,1.05162480675691,0.285650984403804,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.766124028511126,0.307213066512487,0.263772575460388,0.548925861614458,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0,0.186399445825301,0.302904773332736,0.151143120213571,2.89864488701678,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0.779358013808606,0.35333957451034,0.704217098883403,0,2.54805239706646,0,1.29894624606728,1.01343946190039,0,0.45673551887624,1.03575153458869,0.29688427812965,0.173485326766136,0,1.15307748628029,0,0.470354828542819,0.251333182659351,0,0.578397427679647,1.76922110389975,0.161766849947409,0.883366073841574,1.45462575940567,0,0.585561594023094,0.83778682725382,0,0.718890747035522,0.599902730993408,1.27070227073065,0.599162557619291,2.28750301409313,0,1.04294592115366,0.511430914660661,0.41557608911912,0.973447578406546,0.305518091550949,1.11966273549084,1.0108910337347,0.210441855886474,0.520481771850815,0.919608417733892,0.540186389416048,0.90422890701429,0.816437989815934,0.768682321709099,0.468508622798644,0.258703370739016,0,0.756424320671277,0.703804496655795,0.43839146485515,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0.772043721344145,0.568326998791185,0.207125772535502,0.469052119962192,1.08037236876609,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.804820204198858,0.817357396570186,0.16455984991348,0,0.486412857275134,0.438599962275997,0.658650345873152,1.07365135008297,1.26173969138476,0.411618449517138,0,0.793351699990633,0.426576501070468,0.928946687441754,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.569003702859245,0.342745537829186,0,1.01825663922657,0.387904974335251,0.280543279561274,0.252946148497029,0.147610147979602,0.156998727841375,0.863780147452604,0.296452627087149,1.33476084572875,0.982794975566015,0.674586337154561,1.01430060694251,1.4470629585145,2.5462585178142,0.863088412352432,0.324270453550071,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.739012760666419,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0.837531287209079,0.476087281772027,0,0.157635144106191,0,0.478364305972461,1.14704320301017,1.20879487306127,0.578596234326046,3.01582567878545,0,0.983528546038072,0.551873492609465,0.80275294993896,1.05490517932983,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0.162886959353576,0.659880491890142,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,2.38307724027652,0.720244376125241,0.905510786479282,1.07168517515796,0.532020700926821,1.24858172321449,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0.441056796109924,0.49465875882444,0.645857706783622,0.784068024066026,0.716234064018819,0.164140899745061,0,0.370850604021019,1.70870880797853,0.412773735926445,0.925972636848558,2.0720530270516,1.91371918809435,2.0590035588587,0.339956859987711,0.559805809294632,0.690999869022119,0,0.316335993581135,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,2.4853572523477,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0.675824501963113,0.58678619322877,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,1.26404448251271,0.202725215290164,0.308132871494482,0,0.895133478337407,1.78813219303138,1.80293174279953,2.65841148914239,2.82706059854813,2.51482461961499,2.92395936896837,1.46186821109629,4.32953287381483,5.02570679380746,0.226730383615211,0,0.448569283047378,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,0,1.20297227640581,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0.415149390336707,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,1.01391719956096,0.754505365544305,0.749132059759059,0.384150914429216,0.402048282689293,1.42888107384922,0.231768651889711,0,0,0.147198920134397,1.02860775715625,0.354951612318675,0.715308569841963,0,0.470546902076653,0.25384382367503,0,0.789209134313529,0.271608227691724,0.561142271657738,0.474540072496697,0.394017929502254,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0.57386499620653,0.441182838239031,0.231867835620421|short_description=p@chr11:44284081..44284108,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=6
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr11:44284081..44284108,+
|id=chr11:44284081..44284108,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,4.76e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0050686,7.03e-07,6
|ontology_enrichment_uberon=UBERON:0002193!6.35e-08!48;UBERON:0002390!6.37e-08!45;UBERON:0003061!6.37e-08!45;UBERON:0004177!2.86e-07!29;UBERON:0002405!3.32e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-11,29;UBERON:0005057,1.88e-11,29;UBERON:0003408,5.58e-10,24;UBERON:0000077,6.88e-10,35;UBERON:0002390,1.09e-09,45;UBERON:0003061,1.09e-09,45;UBERON:0002193,1.48e-09,48;UBERON:0002405,1.48e-09,48;UBERON:0000072,2.49e-09,27;UBERON:0002370,4.65e-09,23;UBERON:0000974,4.65e-09,23;UBERON:0004807,4.65e-09,23;UBERON:0005058,4.65e-09,23;UBERON:0003351,4.65e-09,23;UBERON:0009113,4.65e-09,23;UBERON:0003295,4.65e-09,23;UBERON:0009722,4.65e-09,23;UBERON:0005562,4.65e-09,23;UBERON:0007690,4.65e-09,23;UBERON:0006562,1.61e-08,24;UBERON:0001557,1.61e-08,24;UBERON:0001042,1.61e-08,24;UBERON:0008814,1.61e-08,24;UBERON:0009145,1.61e-08,24;UBERON:0002368,3.35e-08,60;UBERON:0002530,6.97e-08,65;UBERON:0001041,4.79e-07,80;UBERON:0000949,5.50e-07,72;UBERON:0001004,7.29e-07,42
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.467225281191051,5.16493293766305,0.703943610758334,0.70219357896598,1.36974374580404,0.797721589953364,2.56801094896809,4.19617931611188,0.999329285446988,0.404950534779652,0.699561878128147,2.5236973228659,2.60517423850904,2.97072756258621,0.340173160604279,0.397163804803541,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0,3.81018404075779,3.07532393792285,0,0.288851619751275,0,0.408338712524738,12.5559489221072,6.2506827561904,5.75876118371178,30.5880373776127,8.19654581950135,13.1087795318411,0.629484089877886,0.608261587317087,1.46837401729345,0,0,0,0.777719596297134,0.139986421625363,0,6.20795642413625,2.90144856804538,1.00828139742739,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,1.05162480675691,0.285650984403804,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.766124028511126,0.307213066512487,0.263772575460388,0.548925861614458,0,0.279182999001381,0.56276261003168,0.61119299110724,0.294628585473668,0,0.186399445825301,0.302904773332736,0.151143120213571,2.89864488701678,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0.779358013808606,0.35333957451034,0.704217098883403,0,2.54805239706646,0,1.29894624606728,1.01343946190039,0,0.45673551887624,1.03575153458869,0.29688427812965,0.173485326766136,0,1.15307748628029,0,0.470354828542819,0.251333182659351,0,0.578397427679647,1.76922110389975,0.161766849947409,0.883366073841574,1.45462575940567,0,0.585561594023094,0.83778682725382,0,0.718890747035522,0.599902730993408,1.27070227073065,0.599162557619291,2.28750301409313,0,1.04294592115366,0.511430914660661,0.41557608911912,0.973447578406546,0.305518091550949,1.11966273549084,1.0108910337347,0.210441855886474,0.520481771850815,0.919608417733892,0.540186389416048,0.90422890701429,0.816437989815934,0.768682321709099,0.468508622798644,0.258703370739016,0,0.756424320671277,0.703804496655795,0.43839146485515,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0.772043721344145,0.568326998791185,0.207125772535502,0.469052119962192,1.08037236876609,0.473489471170421,0.393528463494808,0.154267112887378,0.465067889500816,0.804820204198858,0.817357396570186,0.16455984991348,0,0.486412857275134,0.438599962275997,0.658650345873152,1.07365135008297,1.26173969138476,0.411618449517138,0,0.793351699990633,0.426576501070468,0.928946687441754,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.569003702859245,0.342745537829186,0,1.01825663922657,0.387904974335251,0.280543279561274,0.252946148497029,0.147610147979602,0.156998727841375,0.863780147452604,0.296452627087149,1.33476084572875,0.982794975566015,0.674586337154561,1.01430060694251,1.4470629585145,2.5462585178142,0.863088412352432,0.324270453550071,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.739012760666419,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0.837531287209079,0.476087281772027,0,0.157635144106191,0,0.478364305972461,1.14704320301017,1.20879487306127,0.578596234326046,3.01582567878545,0,0.983528546038072,0.551873492609465,0.80275294993896,1.05490517932983,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0.162886959353576,0.659880491890142,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,2.38307724027652,0.720244376125241,0.905510786479282,1.07168517515796,0.532020700926821,1.24858172321449,0.658196082408484,1.522324745573,0.23467170806371,0.63549621259146,0.441056796109924,0.49465875882444,0.645857706783622,0.784068024066026,0.716234064018819,0.164140899745061,0,0.370850604021019,1.70870880797853,0.412773735926445,0.925972636848558,2.0720530270516,1.91371918809435,2.0590035588587,0.339956859987711,0.559805809294632,0.690999869022119,0,0.316335993581135,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,2.4853572523477,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0.675824501963113,0.58678619322877,0.781226309063701,0.314578033277133,0.241584120826006,0.288030006257865,1.26404448251271,0.202725215290164,0.308132871494482,0,0.895133478337407,1.78813219303138,1.80293174279953,2.65841148914239,2.82706059854813,2.51482461961499,2.92395936896837,1.46186821109629,4.32953287381483,5.02570679380746,0.226730383615211,0,0.448569283047378,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,0,1.20297227640581,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0.51776031175182,0.415149390336707,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162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|short_description=p@chr11:44284081..44284108,+
}}

Revision as of 19:41, 12 September 2013

Short description:p@chr11:44284081..44284108, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:44284081..44284108, +
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr11:44284081..44284108+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell4.76e-0725

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.88e-1129
immune organ1.88e-1129
gland of gut5.58e-1024
mixed endoderm/mesoderm-derived structure6.88e-1035
hematopoietic system1.09e-0945
blood island1.09e-0945
hemolymphoid system1.48e-0948
immune system1.48e-0948
segment of respiratory tract2.49e-0927
thymus4.65e-0923
neck4.65e-0923
respiratory system epithelium4.65e-0923
hemolymphoid system gland4.65e-0923
pharyngeal epithelium4.65e-0923
thymic region4.65e-0923
pharyngeal gland4.65e-0923
entire pharyngeal arch endoderm4.65e-0923
thymus primordium4.65e-0923
early pharyngeal endoderm4.65e-0923
pharynx1.61e-0824
upper respiratory tract1.61e-0824
chordate pharynx1.61e-0824
pharyngeal arch system1.61e-0824
pharyngeal region of foregut1.61e-0824
endocrine gland3.35e-0860
gland6.97e-0865
foregut4.79e-0780
endocrine system5.50e-0772
respiratory system7.29e-0742

Disease
Ontology termp-valuen
organ system cancer7.03e-076







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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