FFCP PHASE1:Mm9::chr11:53114308..53114334,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:53114308..53114334,+|id=chr11:53114308..53114334,+|ontology_enrichment_celltype=CL:0000063!2.90e-07!66|ontology_enrichment_celltype_v019_2=CL:0002320,1.51e-07,46;CL:0000134,1.51e-07,46;CL:0000738,2.89e-07,17;CL:0002087,2.89e-07,17;CL:0000988,3.03e-07,32;CL:0002032,3.03e-07,32;CL:0000037,3.03e-07,32;CL:0000837,3.03e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.51e-07,46|phase1_expression=0.320297694209588,1.39590163055744,1.36499771816861,2.72217790176147,5.50985302940982,1.00727563147134,0.934450562382103,4.77756296733832,0.84473233291,1.17032263160997,1.54096171402954,2.55270908785077,4.10881751834894,2.09808965805594,0.333109761815663,0.607425802169478,0,1.10411757875383,0.822686601634433,0.84877930359606,1.7008658030214,1.98581902401771,0.261199789138935,1.11994695955385,1.37645568640302,0.57423196411502,2.15380998079537,0.215471232685889,1.90023419456374,0.504060259519861,1.10865255327652,11.4305521222734,1.23012957516914,0,2.88851619751275,1.82858109894342,2.24586291888606,25.9489611056883,21.0960543021426,23.0350447348471,52.9408339227913,19.8083190637949,12.1377588257788,2.26614272356039,2.12891555560981,1.65192076945513,0,1.09012578190223,0.878744730937887,0.58328969722285,0.699932108126813,1.43752564364972,2.85230430298152,4.35217285206807,0.672187598284928,0.771778308107841,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,1.69422266034566,0,0.449949858640699,0.988866362566974,1.4209602298922,1.49800055259202,2.30530983192933,0.103689612308478,0.945041568321835,0.420649922702764,0.285650984403804,0.441737081903227,0.979926393719632,0.479227355091182,0.919218786610021,1.10115880999389,0.510749352340751,0.768032666281217,0.263772575460388,0.457438218012048,1.04182674111352,0.279182999001381,0.56276261003168,1.06958773443767,0.883885756421003,0.142371680799103,0.559198337475902,0.227178579999552,0.453429360640713,7.24661221754194,0,1.3599426674155,2.69851595818909,0,0.896053774194671,1.12355536105401,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.5154372870785,2.28023878927589,2.02209778005913,1.1418387971906,0.258937883647172,0.890652834388949,0.867426633830679,3.04465478312141,1.15307748628029,0.904335843315735,1.29347577849275,0.125666591329675,1.48316980640624,1.59059292611903,0,0,0.883366073841574,1.45462575940567,0,2.34224637609238,1.8850203613211,0.255457055208591,1.7972268675888,2.99951365496704,2.03312363316904,0.299581278809645,1.83000241127451,0.376963056338593,0.521472960576829,0.255715457330331,1.0389402227978,0.324482526135515,0.611036183101898,0.870848794270651,2.52722758433675,0.841767423545896,0.390361328888111,0.229902104433473,0.720248519221397,0.753524089178575,0.476255494059295,0.512454881139399,1.40552586839593,3.62184719034622,1.07783996466421,0.567318240503458,1.23165786914764,1.31517439456545,0.834141747676794,0.696504333044333,0.823128545631774,1.19420560091096,0.702213187313235,1.28673953557358,2.55747149456033,0.414251545071004,0.469052119962192,0.540186184383045,0,0.787056926989615,0,1.62773761325285,0.804820204198858,0.583826711835847,0.658239399653922,0.656669856316381,0.648550476366846,1.31579988682799,1.09775057645525,0.402619256281115,0.210289948564127,0.617427674275707,0.330418782983798,0.264450566663544,1.06644125267617,0.928946687441754,0.128867461322093,0,0.889512175379481,0,0.949058123089023,0.988193728344065,0.754005626400808,0.397912944082302,0.779856348476481,1.79763881730844,0.648414149624083,0.398282546508734,1.13800740571849,0.456994050438915,0,0.610953983535943,0.775809948670503,0.350679099451593,0.379419222745544,0.738050739898011,0.627994911365499,0.616985819609003,0.592905254174298,0.500535317148282,0.393117990226406,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.648540907100142,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.358794827043824,2.41221760681684,0.554259570499814,0,0.162964976442026,0.509235257325564,0.469380496577004,0.837531287209079,0.952174563544055,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,1.80249646187312,0.690739927463582,1.3018415272336,1.50791283939272,4.89515115436839,1.47529281905711,0.275936746304732,0.481651769963376,0.937693492737625,0.327869890753351,0.757412781613119,1.26203287766503,0.390438744296638,0.861693590931196,0.716906393857656,1.33679204449436,1.13230612315533,1.61924280669958,1.16902343164525,0.790575555893047,2.24924921495265,0.425820255624806,1.06839362200353,0.162886959353576,0.989820737835213,1.32745138339963,1.45668381692989,0.906970670894253,0,1.47650946440386,1.84461088766356,0.516856586336442,0.363533729477506,0.712994756769443,0,0,1.03135543248187,1.70219802876894,1.26042765821917,0.905510786479282,1.50035924522115,1.4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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:53114308..53114334,+ | |||
|id=chr11:53114308..53114334,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.90e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.51e-07,46;CL:0000134,1.51e-07,46;CL:0000738,2.89e-07,17;CL:0002087,2.89e-07,17;CL:0000988,3.03e-07,32;CL:0002032,3.03e-07,32;CL:0000037,3.03e-07,32;CL:0000837,3.03e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.51e-07,46 | |||
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| |||
|short_description=p@chr11:53114308..53114334,+ | |||
}} |
Revision as of 19:56, 12 September 2013
Short description: | p@chr11:53114308..53114334, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53114308..53114334, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.51e-07 | 46 |
mesenchymal cell | 1.51e-07 | 46 |
leukocyte | 2.89e-07 | 17 |
nongranular leukocyte | 2.89e-07 | 17 |
hematopoietic cell | 3.03e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.03e-07 | 32 |
hematopoietic stem cell | 3.03e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.03e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.51e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.