FFCP PHASE1:Mm9::chr11:53243955..53243966,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:53243955..53243966,+|id=chr11:53243955..53243966,+|ontology_enrichment_celltype=CL:0002563!4.19e-12!9;CL:0002251!4.19e-12!9;CL:0000239!2.82e-11!6;CL:0000677!2.82e-11!6;CL:0000212!2.82e-11!6;CL:0000584!2.82e-11!6;CL:0000066!3.65e-11!25;CL:0000063!1.01e-09!66;CL:0000075!1.63e-09!7;CL:0000223!8.83e-09!20|ontology_enrichment_celltype_v019_2=CL:0000239,5.27e-14,6;CL:0000677,5.27e-14,6;CL:0000584,5.27e-14,6;CL:0002563,6.61e-14,9;CL:0002251,6.61e-14,9;CL:0000075,4.96e-12,7;CL:0000066,7.57e-12,25;CL:0000223,1.10e-08,20;CL:0002076,2.76e-08,15;CL:0000682,2.40e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.40e-07,3;DOID:4045,2.40e-07,3|ontology_enrichment_uberon=UBERON:0000344!2.51e-12!15;UBERON:0001242!3.94e-12!13;UBERON:0000060!3.94e-12!13;UBERON:0001262!3.94e-12!13;UBERON:0004786!3.94e-12!13;UBERON:0003350!4.19e-12!9;UBERON:0004808!4.19e-12!9;UBERON:0001277!4.19e-12!9;UBERON:0000485!1.39e-09!11;UBERON:0004923!2.32e-09!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.61e-14,9;UBERON:0004808,6.61e-14,9;UBERON:0001277,6.61e-14,9;UBERON:0000485,2.35e-11,11;UBERON:0001242,1.38e-09,13;UBERON:0001262,1.38e-09,13;UBERON:0004786,1.38e-09,13;UBERON:0000344,2.76e-08,15|phase1_expression=0,2.09385244583617,2.27499619694768,4.53696316960245,7.51343594919521,0.839396359559449,0.700837921786577,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0,0,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,0,0.756090389279792,0,0,0,0,1.1554064790051,0,0.204169356262369,1.67412652294763,1.5626706890476,0.523523743973798,7.64700934440319,3.41522742479223,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,2.719885334831,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,14.6560164057889,0,0,0,0,0,0.117357238645754,0,0,0,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:53243955..53243966,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:53243955..53243966,+ | |||
|id=chr11:53243955..53243966,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.19e-12!9;CL:0002251!4.19e-12!9;CL:0000239!2.82e-11!6;CL:0000677!2.82e-11!6;CL:0000212!2.82e-11!6;CL:0000584!2.82e-11!6;CL:0000066!3.65e-11!25;CL:0000063!1.01e-09!66;CL:0000075!1.63e-09!7;CL:0000223!8.83e-09!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.27e-14,6;CL:0000677,5.27e-14,6;CL:0000584,5.27e-14,6;CL:0002563,6.61e-14,9;CL:0002251,6.61e-14,9;CL:0000075,4.96e-12,7;CL:0000066,7.57e-12,25;CL:0000223,1.10e-08,20;CL:0002076,2.76e-08,15;CL:0000682,2.40e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.40e-07,3;DOID:4045,2.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.51e-12!15;UBERON:0001242!3.94e-12!13;UBERON:0000060!3.94e-12!13;UBERON:0001262!3.94e-12!13;UBERON:0004786!3.94e-12!13;UBERON:0003350!4.19e-12!9;UBERON:0004808!4.19e-12!9;UBERON:0001277!4.19e-12!9;UBERON:0000485!1.39e-09!11;UBERON:0004923!2.32e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.61e-14,9;UBERON:0004808,6.61e-14,9;UBERON:0001277,6.61e-14,9;UBERON:0000485,2.35e-11,11;UBERON:0001242,1.38e-09,13;UBERON:0001262,1.38e-09,13;UBERON:0004786,1.38e-09,13;UBERON:0000344,2.76e-08,15 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,4.53696316960245,7.51343594919521,0.839396359559449,0.700837921786577,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0,0,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,0,0.756090389279792,0,0,0,0,1.1554064790051,0,0.204169356262369,1.67412652294763,1.5626706890476,0.523523743973798,7.64700934440319,3.41522742479223,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,2.719885334831,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,14.6560164057889,0,0,0,0,0,0.117357238645754,0,0,0,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:53243955..53243966,+ | |||
}} |
Revision as of 19:56, 12 September 2013
Short description: | p@chr11:53243955..53243966, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53243955..53243966, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.27e-14 | 6 |
gut absorptive cell | 5.27e-14 | 6 |
enterocyte | 5.27e-14 | 6 |
intestinal epithelial cell | 6.61e-14 | 9 |
epithelial cell of alimentary canal | 6.61e-14 | 9 |
columnar/cuboidal epithelial cell | 4.96e-12 | 7 |
epithelial cell | 7.57e-12 | 25 |
endodermal cell | 1.10e-08 | 20 |
endo-epithelial cell | 2.76e-08 | 15 |
M cell of gut | 2.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.61e-14 | 9 |
gastrointestinal system epithelium | 6.61e-14 | 9 |
intestinal epithelium | 6.61e-14 | 9 |
simple columnar epithelium | 2.35e-11 | 11 |
intestinal mucosa | 1.38e-09 | 13 |
wall of intestine | 1.38e-09 | 13 |
gastrointestinal system mucosa | 1.38e-09 | 13 |
mucosa | 2.76e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.40e-07 | 3 |
muscle cancer | 2.40e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.