FFCP PHASE1:Mm9::chr11:58203760..58203791,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=314|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58203760..58203791,-|id=chr11:58203760..58203791,-|ontology_enrichment_celltype=CL:0002563!9.78e-12!9;CL:0002251!9.78e-12!9;CL:0000239!1.45e-08!6;CL:0000677!1.45e-08!6;CL:0000212!1.45e-08!6;CL:0000584!1.45e-08!6;CL:0000075!3.37e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,4.82e-14,9;CL:0002251,4.82e-14,9;CL:0000239,3.91e-09,6;CL:0000677,3.91e-09,6;CL:0000584,3.91e-09,6;CL:0000066,3.23e-08,25;CL:0002076,6.44e-08,15;CL:0000075,8.84e-08,7;CL:0000682,4.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.92e-33!59;UBERON:0000160!2.01e-30!43;UBERON:0000344!3.64e-20!15;UBERON:0001242!3.80e-17!13;UBERON:0000060!3.80e-17!13;UBERON:0001262!3.80e-17!13;UBERON:0004786!3.80e-17!13;UBERON:0003350!9.78e-12!9;UBERON:0004808!9.78e-12!9;UBERON:0001277!9.78e-12!9;UBERON:0004923!6.19e-11!24;UBERON:0001007!9.08e-11!128;UBERON:0001555!9.08e-11!128;UBERON:0007026!9.08e-11!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!2.45e-09!126;UBERON:0004185!2.45e-09!126;UBERON:0000485!3.21e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.84e-49,31;UBERON:0005409,6.17e-44,47;UBERON:0000344,5.55e-27,15;UBERON:0001242,2.45e-22,13;UBERON:0001262,2.45e-22,13;UBERON:0004786,2.45e-22,13;UBERON:0001007,3.46e-16,116;UBERON:0001555,3.46e-16,116;UBERON:0007026,3.46e-16,116;UBERON:0004119,8.73e-16,118;UBERON:0000925,8.73e-16,118;UBERON:0006595,8.73e-16,118;UBERON:0004923,1.22e-15,24;UBERON:0003350,4.82e-14,9;UBERON:0004808,4.82e-14,9;UBERON:0001277,4.82e-14,9;UBERON:0004921,6.79e-14,114;UBERON:0000485,2.95e-11,11;UBERON:0002108,3.62e-10,4;UBERON:0000331,3.65e-08,3;UBERON:0002116,3.65e-08,3;UBERON:0001204,3.65e-08,3;UBERON:0001168,3.65e-08,3|phase1_expression=0,1.74487703819681,4.54999239389536,0.90739263392049,4.00716583957078,1.84667199103079,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,9.43955294481099,10.5528269290898,2.29692785646008,2.15380998079537,2.80112602491656,21.4726463985703,3.52842181663903,8.64748991555688,0,0,0,1.1554064790051,1.32987716286794,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,7.32895999457657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.70230793328962,0.213288250535234,0.464473343720877,0.902072229254653,1.00841762311671,1.11189021922435,2.28270751335071,9.01605216934572,4.28217282282428,5.27803938480566,3.38226002469956,5.26403035221624,8.98819408654222,12.3198688428576,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.972048067396211,0.627264888043406,1.74690050996942,1.48350781023303,0.909188012978695,3.66458318777641,37.7179572279117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421|short_description=p@chr11:58203760..58203791,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=314 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:58203760..58203791,- | |||
|id=chr11:58203760..58203791,- | |||
|ontology_enrichment_celltype=CL:0002563!9.78e-12!9;CL:0002251!9.78e-12!9;CL:0000239!1.45e-08!6;CL:0000677!1.45e-08!6;CL:0000212!1.45e-08!6;CL:0000584!1.45e-08!6;CL:0000075!3.37e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.82e-14,9;CL:0002251,4.82e-14,9;CL:0000239,3.91e-09,6;CL:0000677,3.91e-09,6;CL:0000584,3.91e-09,6;CL:0000066,3.23e-08,25;CL:0002076,6.44e-08,15;CL:0000075,8.84e-08,7;CL:0000682,4.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.92e-33!59;UBERON:0000160!2.01e-30!43;UBERON:0000344!3.64e-20!15;UBERON:0001242!3.80e-17!13;UBERON:0000060!3.80e-17!13;UBERON:0001262!3.80e-17!13;UBERON:0004786!3.80e-17!13;UBERON:0003350!9.78e-12!9;UBERON:0004808!9.78e-12!9;UBERON:0001277!9.78e-12!9;UBERON:0004923!6.19e-11!24;UBERON:0001007!9.08e-11!128;UBERON:0001555!9.08e-11!128;UBERON:0007026!9.08e-11!128;UBERON:0004119!2.01e-10!130;UBERON:0000925!2.01e-10!130;UBERON:0006595!2.01e-10!130;UBERON:0004921!2.45e-09!126;UBERON:0004185!2.45e-09!126;UBERON:0000485!3.21e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.84e-49,31;UBERON:0005409,6.17e-44,47;UBERON:0000344,5.55e-27,15;UBERON:0001242,2.45e-22,13;UBERON:0001262,2.45e-22,13;UBERON:0004786,2.45e-22,13;UBERON:0001007,3.46e-16,116;UBERON:0001555,3.46e-16,116;UBERON:0007026,3.46e-16,116;UBERON:0004119,8.73e-16,118;UBERON:0000925,8.73e-16,118;UBERON:0006595,8.73e-16,118;UBERON:0004923,1.22e-15,24;UBERON:0003350,4.82e-14,9;UBERON:0004808,4.82e-14,9;UBERON:0001277,4.82e-14,9;UBERON:0004921,6.79e-14,114;UBERON:0000485,2.95e-11,11;UBERON:0002108,3.62e-10,4;UBERON:0000331,3.65e-08,3;UBERON:0002116,3.65e-08,3;UBERON:0001204,3.65e-08,3;UBERON:0001168,3.65e-08,3 | |||
|phase1_expression=0,1.74487703819681,4.54999239389536,0.90739263392049,4.00716583957078,1.84667199103079,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,9.43955294481099,10.5528269290898,2.29692785646008,2.15380998079537,2.80112602491656,21.4726463985703,3.52842181663903,8.64748991555688,0,0,0,1.1554064790051,1.32987716286794,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,7.32895999457657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,3.70230793328962,0.213288250535234,0.464473343720877,0.902072229254653,1.00841762311671,1.11189021922435,2.28270751335071,9.01605216934572,4.28217282282428,5.27803938480566,3.38226002469956,5.26403035221624,8.98819408654222,12.3198688428576,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.972048067396211,0.627264888043406,1.74690050996942,1.48350781023303,0.909188012978695,3.66458318777641,37.7179572279117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0.476872379894642,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr11:58203760..58203791,- | |||
}} |
Revision as of 20:07, 12 September 2013
Short description: | p@chr11:58203760..58203791, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58203760..58203791, - |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.82e-14 | 9 |
epithelial cell of alimentary canal | 4.82e-14 | 9 |
brush border epithelial cell | 3.91e-09 | 6 |
gut absorptive cell | 3.91e-09 | 6 |
enterocyte | 3.91e-09 | 6 |
epithelial cell | 3.23e-08 | 25 |
endo-epithelial cell | 6.44e-08 | 15 |
columnar/cuboidal epithelial cell | 8.84e-08 | 7 |
M cell of gut | 4.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.84e-49 | 31 |
gastrointestinal system | 6.17e-44 | 47 |
mucosa | 5.55e-27 | 15 |
intestinal mucosa | 2.45e-22 | 13 |
wall of intestine | 2.45e-22 | 13 |
gastrointestinal system mucosa | 2.45e-22 | 13 |
digestive system | 3.46e-16 | 116 |
digestive tract | 3.46e-16 | 116 |
primitive gut | 3.46e-16 | 116 |
endoderm-derived structure | 8.73e-16 | 118 |
endoderm | 8.73e-16 | 118 |
presumptive endoderm | 8.73e-16 | 118 |
organ component layer | 1.22e-15 | 24 |
epithelium of mucosa | 4.82e-14 | 9 |
gastrointestinal system epithelium | 4.82e-14 | 9 |
intestinal epithelium | 4.82e-14 | 9 |
subdivision of digestive tract | 6.79e-14 | 114 |
simple columnar epithelium | 2.95e-11 | 11 |
small intestine | 3.62e-10 | 4 |
ileal mucosa | 3.65e-08 | 3 |
ileum | 3.65e-08 | 3 |
mucosa of small intestine | 3.65e-08 | 3 |
wall of small intestine | 3.65e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.