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FFCP PHASE1:Mm9::chr11:76308362..76308385,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=109934|HGNC=|UniProt=|association_with_transcript=100bp_to_ENSMUST00000137261_5end|description=CAGE_peak_9_at_Abr_5end|id=chr11:76308362..76308385,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!9.63e-08!41;UBERON:0001004!4.34e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.63e-10,41;UBERON:0004119,8.72e-10,118;UBERON:0000925,8.72e-10,118;UBERON:0006595,8.72e-10,118;UBERON:0006562,8.89e-10,24;UBERON:0001557,8.89e-10,24;UBERON:0001042,8.89e-10,24;UBERON:0008814,8.89e-10,24;UBERON:0009145,8.89e-10,24;UBERON:0001007,1.68e-09,116;UBERON:0001555,1.68e-09,116;UBERON:0007026,1.68e-09,116;UBERON:0001004,2.03e-09,42;UBERON:0002370,2.13e-09,23;UBERON:0000974,2.13e-09,23;UBERON:0004807,2.13e-09,23;UBERON:0005058,2.13e-09,23;UBERON:0003351,2.13e-09,23;UBERON:0009113,2.13e-09,23;UBERON:0003295,2.13e-09,23;UBERON:0009722,2.13e-09,23;UBERON:0005562,2.13e-09,23;UBERON:0007690,2.13e-09,23;UBERON:0004921,2.77e-09,114;UBERON:0003408,8.80e-09,24;UBERON:0000077,1.17e-08,35;UBERON:0000072,4.51e-08,27;UBERON:0004177,3.31e-07,29;UBERON:0005057,3.31e-07,29;UBERON:0005911,3.84e-07,69|phase1_expression=0.640595388419176,1.74487703819681,2.72999543633722,3.62957053568196,3.00537437967808,1.17515490338323,0.934450562382103,2.58246646883153,0.703943610758334,0.70219357896598,0,0.239316476986009,4.10881751834894,3.93391810885488,0.333109761815663,0.404950534779652,0,0.788655413395594,0.822686601634433,1.27316895539409,0.935476191661768,0.992909512008853,1.30599894569468,1.43993180514066,0.45881856213434,2.8711598205751,0.430761996159075,0.646413698057667,2.09025761402011,1.51218077855958,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,3.34825304589526,0.7813353445238,0,3.52938892818609,6.14740936462601,5.34061388334269,1.00717454380462,1.82478476195126,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.58328969722285,0.699932108126813,0,0.335565212115473,7.25362142011344,2.68875039313971,1.28629718017973,0.85960031981627,1.54701627683233,0.404632921719196,0.528990979272033,1.26766280701236,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,0.103689612308478,0.405017814995072,0,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.510749352340751,0.768032666281217,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.916789486660861,0.883885756421003,0.284743361598206,0.372798891650601,0.151452386666368,0.151143120213571,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0.779358013808606,1.41335829804136,0.422530259330042,1.28326477414318,5.09610479413291,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,0.517875767294343,1.1875371125186,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0.741584903203122,0.289198713839823,0.884610551949874,0.808834249737046,0.883366073841574,0.484875253135222,0,0.292780797011547,0.83778682725382,1.53274233125155,0.838705871541442,0,0,0.299581278809645,0,0.502617408451458,0.173824320192276,0,0.83115217823824,0.648965052271031,0.611036183101898,1.24406970610093,0.252722758433675,3.57751155007006,0,0.919608417733892,0.180062129805349,0.150704817835715,0.340182495756639,0.2562274405697,0.749613796477831,0.517406741478031,0.431135985865684,0.945530400839096,0.703804496655795,0.43839146485515,0.556094498451196,2.43776516565517,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.473489471170421,1.37734962223183,0.771335564436891,0.930135779001631,1.07309360559848,0.700592054203017,1.15191894939436,0.985004784474571,1.29710095273369,0.730999937126662,1.3173006917463,1.74468344388483,0.210289948564127,0.720332286654991,3.96502539580558,0.793351699990633,0.426576501070468,0.464473343720877,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,0.474529061544512,1.4822905925161,1.25667604400135,1.59165177632921,0.779856348476481,0,0.864552199498777,2.38969527905241,0.189667900953082,0.456994050438915,0,0.814605311381257,0.387904974335251,0.631222379012867,0.69560190836683,0.147610147979602,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0,0,0,0,0,2.21703828199926,0.757965647081939,0.488894929326078,0.169745085775188,0.469380496577004,1.00503754465089,0.952174563544055,2.34160377429359,1.41871629695572,0.664394068946325,2.07291199254733,2.29408640602033,1.20879487306127,1.73578870297814,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0.491804836130026,1.00988370881749,0.315508219416257,0,0.430846795465598,0.477937595905104,0,0.566153061577665,0,0.876767573733936,0.395287777946524,0.642642632843614,0.709700426041343,0.35613120733451,1.14020871547503,0.659880491890142,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|EntrezGene=109934
|HGNC=
|UniProt=
|association_with_transcript=100bp_to_ENSMUST00000137261_5end
|description=CAGE_peak_9_at_Abr_5end
|id=chr11:76308362..76308385,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!9.63e-08!41;UBERON:0001004!4.34e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0000065,7.63e-10,41;UBERON:0004119,8.72e-10,118;UBERON:0000925,8.72e-10,118;UBERON:0006595,8.72e-10,118;UBERON:0006562,8.89e-10,24;UBERON:0001557,8.89e-10,24;UBERON:0001042,8.89e-10,24;UBERON:0008814,8.89e-10,24;UBERON:0009145,8.89e-10,24;UBERON:0001007,1.68e-09,116;UBERON:0001555,1.68e-09,116;UBERON:0007026,1.68e-09,116;UBERON:0001004,2.03e-09,42;UBERON:0002370,2.13e-09,23;UBERON:0000974,2.13e-09,23;UBERON:0004807,2.13e-09,23;UBERON:0005058,2.13e-09,23;UBERON:0003351,2.13e-09,23;UBERON:0009113,2.13e-09,23;UBERON:0003295,2.13e-09,23;UBERON:0009722,2.13e-09,23;UBERON:0005562,2.13e-09,23;UBERON:0007690,2.13e-09,23;UBERON:0004921,2.77e-09,114;UBERON:0003408,8.80e-09,24;UBERON:0000077,1.17e-08,35;UBERON:0000072,4.51e-08,27;UBERON:0004177,3.31e-07,29;UBERON:0005057,3.31e-07,29;UBERON:0005911,3.84e-07,69
|phase1_expression=0.640595388419176,1.74487703819681,2.72999543633722,3.62957053568196,3.00537437967808,1.17515490338323,0.934450562382103,2.58246646883153,0.703943610758334,0.70219357896598,0,0.239316476986009,4.10881751834894,3.93391810885488,0.333109761815663,0.404950534779652,0,0.788655413395594,0.822686601634433,1.27316895539409,0.935476191661768,0.992909512008853,1.30599894569468,1.43993180514066,0.45881856213434,2.8711598205751,0.430761996159075,0.646413698057667,2.09025761402011,1.51218077855958,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,3.34825304589526,0.7813353445238,0,3.52938892818609,6.14740936462601,5.34061388334269,1.00717454380462,1.82478476195126,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.58328969722285,0.699932108126813,0,0.335565212115473,7.25362142011344,2.68875039313971,1.28629718017973,0.85960031981627,1.54701627683233,0.404632921719196,0.528990979272033,1.26766280701236,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,0.103689612308478,0.405017814995072,0,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.510749352340751,0.768032666281217,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.916789486660861,0.883885756421003,0.284743361598206,0.372798891650601,0.151452386666368,0.151143120213571,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0.779358013808606,1.41335829804136,0.422530259330042,1.28326477414318,5.09610479413291,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,0.517875767294343,1.1875371125186,0.520455980298408,0.608930956624282,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0.741584903203122,0.289198713839823,0.884610551949874,0.808834249737046,0.883366073841574,0.484875253135222,0,0.292780797011547,0.83778682725382,1.53274233125155,0.838705871541442,0,0,0.299581278809645,0,0.502617408451458,0.173824320192276,0,0.83115217823824,0.648965052271031,0.611036183101898,1.24406970610093,0.252722758433675,3.57751155007006,0,0.919608417733892,0.180062129805349,0.150704817835715,0.340182495756639,0.2562274405697,0.749613796477831,0.517406741478031,0.431135985865684,0.945530400839096,0.703804496655795,0.43839146485515,0.556094498451196,2.43776516565517,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,0.473489471170421,1.37734962223183,0.771335564436891,0.930135779001631,1.07309360559848,0.700592054203017,1.15191894939436,0.985004784474571,1.29710095273369,0.730999937126662,1.3173006917463,1.74468344388483,0.210289948564127,0.720332286654991,3.96502539580558,0.793351699990633,0.426576501070468,0.464473343720877,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,0.474529061544512,1.4822905925161,1.25667604400135,1.59165177632921,0.779856348476481,0,0.864552199498777,2.38969527905241,0.189667900953082,0.456994050438915,0,0.814605311381257,0.387904974335251,0.631222379012867,0.69560190836683,0.147610147979602,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0,0,0,0,0,2.21703828199926,0.757965647081939,0.488894929326078,0.169745085775188,0.469380496577004,1.00503754465089,0.952174563544055,2.34160377429359,1.41871629695572,0.664394068946325,2.07291199254733,2.29408640602033,1.20879487306127,1.73578870297814,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0.491804836130026,1.00988370881749,0.315508219416257,0,0.430846795465598,0.477937595905104,0,0.566153061577665,0,0.876767573733936,0.395287777946524,0.642642632843614,0.709700426041343,0.35613120733451,1.14020871547503,0.659880491890142,0,0,1.209294227859,0.565815239267694,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.646793418913773,0,0.177340233642274,0.356737635204141,0.329098041204242,1.2178597964584,1.87737366450968,0.847328283455281,1.32317038832977,1.31909002353184,1.13025098687134,0.844380948994182,1.3130957840345,0.656563598980245,1.45740418314925,1.11255181206306,0.512612642393558,1.23832120777933,0.740778109478847,0.565105371014073,0,0,1.86976272993241,0.979660166265606,1.65839968565309,1.90934123603023,0.949007980743406,0.609958401380546,0.756037385752609,0.836353184057875,1.52853794622324,0.944050424693745,1.40510874733071,1.57053565190418,1.16653475962614,0,0,0.747582730219894,0,1.55560950675238,0.387479470433193,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0,0,2.52808896502543,0.608175645870493,0.718976700153791,1.29920822977795,2.50637373934474,1.98681354781265,2.88469078847925,2.80610101631697,2.3222283488074,3.27689268616499,2.21817607301049,2.92373642219257,2.88635524920988,3.03879945672079,1.13365191807606,1.10992976687032,0.538283139656854,0.167884616364078,0.579568782096571,0.93841237725591,0.73260649706906,1.929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|short_description=p9@Abr
}}

Revision as of 20:57, 12 September 2013

Short description:p9@Abr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Abr_5end
Coexpression cluster:NA
Association with transcript: 100bp_to_ENSMUST00000137261_5end
EntrezGene:Abr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Abr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract7.63e-1041
endoderm-derived structure8.72e-10118
endoderm8.72e-10118
presumptive endoderm8.72e-10118
pharynx8.89e-1024
upper respiratory tract8.89e-1024
chordate pharynx8.89e-1024
pharyngeal arch system8.89e-1024
pharyngeal region of foregut8.89e-1024
digestive system1.68e-09116
digestive tract1.68e-09116
primitive gut1.68e-09116
respiratory system2.03e-0942
thymus2.13e-0923
neck2.13e-0923
respiratory system epithelium2.13e-0923
hemolymphoid system gland2.13e-0923
pharyngeal epithelium2.13e-0923
thymic region2.13e-0923
pharyngeal gland2.13e-0923
entire pharyngeal arch endoderm2.13e-0923
thymus primordium2.13e-0923
early pharyngeal endoderm2.13e-0923
subdivision of digestive tract2.77e-09114
gland of gut8.80e-0924
mixed endoderm/mesoderm-derived structure1.17e-0835
segment of respiratory tract4.51e-0827
hemopoietic organ3.31e-0729
immune organ3.31e-0729
endo-epithelium3.84e-0769







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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