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FFCP PHASE1:Mm9::chr11:77707282..77707340,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19193|HGNC=|MCL_coexpression_id=8|UniProt=Q3UEJ8,Q9D826|association_with_transcript=33bp_to_NM_008952,uc007khm.2_5end|description=CAGE_peak_1_at_Pipox_5end|id=chr11:77707282..77707340,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.11e-13!22;UBERON:0007499!1.11e-13!22;UBERON:0006925!1.11e-13!22;UBERON:0009497!1.11e-13!22;UBERON:0000015!1.11e-13!22;UBERON:0002423!1.11e-13!22;UBERON:0006235!1.11e-13!22;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0004161!1.11e-13!22;UBERON:0008836!1.11e-13!22;UBERON:0000160!1.84e-13!43;UBERON:0009854!2.38e-13!23;UBERON:0009856!2.38e-13!23;UBERON:0005409!2.52e-12!59;UBERON:0005172!3.08e-11!49;UBERON:0005173!3.08e-11!49;UBERON:0002417!3.08e-11!49;UBERON:0000916!3.08e-11!49;UBERON:0002365!3.44e-10!25;UBERON:0002330!3.44e-10!25;UBERON:0005177!6.10e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.94e-14,22;UBERON:0007499,1.94e-14,22;UBERON:0006925,1.94e-14,22;UBERON:0009497,1.94e-14,22;UBERON:0000015,1.94e-14,22;UBERON:0002423,1.94e-14,22;UBERON:0006235,1.94e-14,22;UBERON:0008835,1.94e-14,22;UBERON:0003894,1.94e-14,22;UBERON:0004161,1.94e-14,22;UBERON:0008836,1.94e-14,22;UBERON:0009854,4.39e-14,23;UBERON:0009856,4.39e-14,23;UBERON:0000160,2.49e-12,31;UBERON:0005172,1.17e-11,49;UBERON:0005173,1.17e-11,49;UBERON:0002417,1.17e-11,49;UBERON:0000916,1.17e-11,49;UBERON:0002365,4.95e-11,25;UBERON:0002330,4.95e-11,25;UBERON:0005409,2.11e-10,47|phase1_expression=11.2104192973356,18.8446720125255,11.3749809847384,27.5242432289215,23.5420993074783,13.4303417529512,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,50.8558875103397,0,0,25.5987876469451,21.3350631392468,13.7815671387605,15.9381938578858,18.7459972436723,17.1021077510736,26.7151937545527,3.54768817048488,0,0,0,25.9966457776147,35.2417448160004,29.6045566580435,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0,0,21.3664653252838,7.68901639570651,8.94377535741704,9.65906309215001,11.5002051491977,0,0,0,0,0.286533439938757,0,0.606949382578793,4.7609188134483,0.633831403506179,0.338844532069132,0,0,0,0,6.89080254192331,13.4476406862544,3.21437798156281,3.24014251996058,1.68259969081106,5.99867067247988,2.87129103237098,6.98197555525238,7.3801012684042,3.67687514644008,4.40463523997555,4.34136949489638,4.91540906419979,2.76961204233407,5.03182039813253,2.6045668527838,3.90856198601933,3.93933827022176,7.18151764551008,2.06240009831567,3.27454865837937,1.4911955666024,0.530083353332288,10.202160614416,20.5803786978191,332.984040391797,327.066211513428,530.528237379974,476.935890406589,422.937381419885,190.161744858392,1.70430322578058,0.779358013808606,0.70667914902068,4.92951969218382,5.13305909657271,10.1922095882658,0,0,0,0,291.968180441636,0.258937883647172,3.26572705942614,2.94925055502431,6.39377504455497,9.91646638201052,4.37095657602605,3.41007250693544,6.91166252313215,0,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,1.45462575940567,3.72783522436244,2.04946557908083,0.83778682725382,40.1067576677488,0,0,0,7.48953197024113,2.28750301409313,4.90051973240171,0.869121600961382,0.511430914660661,5.81806524766768,2.27137768294861,4.07357455401265,3.98102305952298,6.06534620240819,0.420883711772948,2.21204753036596,5.28774840196988,6.12211241338187,7.9873553452929,7.55205140579739,17.039124797885,11.9938207436453,1.55222022443409,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,1.66828349535359,0.348252166522167,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,1.64168241986767,2.88099298337624,2.13070262026689,2.75469924446365,0.925602677324269,0.465067889500816,0.536546802799238,0.350296027101508,0.658239399653922,1.14917224855367,0.324275238183423,0.730999937126662,0,0.402619256281115,1.26173969138476,4.21908910755066,57.1624494561971,18.7759902331116,1.06644125267617,4.18026009348789,19.9744565049245,73.61448648752,83.6141444856712,97.0150693174052,40.809499292828,96.3488885135464,92.4913568384992,117.981187920402,98.2618999080366,43.1433316154026,33.2852596807029,38.4342657380929,3.03468641524931,6.05517116831563,21.4144697778853,17.514014194697,19.0073437424273,20.3393877681924,110.22128420758,244.73762535018,255.122932742234,311.084250246859,674.429726623264,7.50802975722423,15.3316016188298,26.3088671490279,42.1949052488086,81.0355256768121,127.822177594273,115.941543392677,86.0938054175438,215.530709352644,152.394298918996,359.488155447774,401.280447625325,553.905479338016,485.98759323086,634.895674114191,0.739012760666419,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,1.26108115284953,0.44292937929755,0.318909537314974,0.983179888294428,1.38147985492716,0.433947175744535,0,0,0,0.275936746304732,5.61927064957272,3.5163505977661,0,0.252470927204373,2.52406575533005,1.56175497718655,4.09304455692318,0.955875191810208,0.6683960222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|EntrezGene=19193
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q3UEJ8,Q9D826
|association_with_transcript=33bp_to_NM_008952,uc007khm.2_5end
|description=CAGE_peak_1_at_Pipox_5end
|id=chr11:77707282..77707340,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.11e-13!22;UBERON:0007499!1.11e-13!22;UBERON:0006925!1.11e-13!22;UBERON:0009497!1.11e-13!22;UBERON:0000015!1.11e-13!22;UBERON:0002423!1.11e-13!22;UBERON:0006235!1.11e-13!22;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0004161!1.11e-13!22;UBERON:0008836!1.11e-13!22;UBERON:0000160!1.84e-13!43;UBERON:0009854!2.38e-13!23;UBERON:0009856!2.38e-13!23;UBERON:0005409!2.52e-12!59;UBERON:0005172!3.08e-11!49;UBERON:0005173!3.08e-11!49;UBERON:0002417!3.08e-11!49;UBERON:0000916!3.08e-11!49;UBERON:0002365!3.44e-10!25;UBERON:0002330!3.44e-10!25;UBERON:0005177!6.10e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.94e-14,22;UBERON:0007499,1.94e-14,22;UBERON:0006925,1.94e-14,22;UBERON:0009497,1.94e-14,22;UBERON:0000015,1.94e-14,22;UBERON:0002423,1.94e-14,22;UBERON:0006235,1.94e-14,22;UBERON:0008835,1.94e-14,22;UBERON:0003894,1.94e-14,22;UBERON:0004161,1.94e-14,22;UBERON:0008836,1.94e-14,22;UBERON:0009854,4.39e-14,23;UBERON:0009856,4.39e-14,23;UBERON:0000160,2.49e-12,31;UBERON:0005172,1.17e-11,49;UBERON:0005173,1.17e-11,49;UBERON:0002417,1.17e-11,49;UBERON:0000916,1.17e-11,49;UBERON:0002365,4.95e-11,25;UBERON:0002330,4.95e-11,25;UBERON:0005409,2.11e-10,47
|phase1_expression=11.2104192973356,18.8446720125255,11.3749809847384,27.5242432289215,23.5420993074783,13.4303417529512,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,50.8558875103397,0,0,25.5987876469451,21.3350631392468,13.7815671387605,15.9381938578858,18.7459972436723,17.1021077510736,26.7151937545527,3.54768817048488,0,0,0,25.9966457776147,35.2417448160004,29.6045566580435,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0,0,21.3664653252838,7.68901639570651,8.94377535741704,9.65906309215001,11.5002051491977,0,0,0,0,0.286533439938757,0,0.606949382578793,4.7609188134483,0.633831403506179,0.338844532069132,0,0,0,0,6.89080254192331,13.4476406862544,3.21437798156281,3.24014251996058,1.68259969081106,5.99867067247988,2.87129103237098,6.98197555525238,7.3801012684042,3.67687514644008,4.40463523997555,4.34136949489638,4.91540906419979,2.76961204233407,5.03182039813253,2.6045668527838,3.90856198601933,3.93933827022176,7.18151764551008,2.06240009831567,3.27454865837937,1.4911955666024,0.530083353332288,10.202160614416,20.5803786978191,332.984040391797,327.066211513428,530.528237379974,476.935890406589,422.937381419885,190.161744858392,1.70430322578058,0.779358013808606,0.70667914902068,4.92951969218382,5.13305909657271,10.1922095882658,0,0,0,0,291.968180441636,0.258937883647172,3.26572705942614,2.94925055502431,6.39377504455497,9.91646638201052,4.37095657602605,3.41007250693544,6.91166252313215,0,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,1.45462575940567,3.72783522436244,2.04946557908083,0.83778682725382,40.1067576677488,0,0,0,7.48953197024113,2.28750301409313,4.90051973240171,0.869121600961382,0.511430914660661,5.81806524766768,2.27137768294861,4.07357455401265,3.98102305952298,6.06534620240819,0.420883711772948,2.21204753036596,5.28774840196988,6.12211241338187,7.9873553452929,7.55205140579739,17.039124797885,11.9938207436453,1.55222022443409,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,1.66828349535359,0.348252166522167,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,1.64168241986767,2.88099298337624,2.13070262026689,2.75469924446365,0.925602677324269,0.465067889500816,0.536546802799238,0.350296027101508,0.658239399653922,1.14917224855367,0.324275238183423,0.730999937126662,0,0.402619256281115,1.26173969138476,4.21908910755066,57.1624494561971,18.7759902331116,1.06644125267617,4.18026009348789,19.9744565049245,73.61448648752,83.6141444856712,97.0150693174052,40.809499292828,96.3488885135464,92.4913568384992,117.981187920402,98.2618999080366,43.1433316154026,33.2852596807029,38.4342657380929,3.03468641524931,6.05517116831563,21.4144697778853,17.514014194697,19.0073437424273,20.3393877681924,110.22128420758,244.73762535018,255.122932742234,311.084250246859,674.429726623264,7.50802975722423,15.3316016188298,26.3088671490279,42.1949052488086,81.0355256768121,127.822177594273,115.941543392677,86.0938054175438,215.530709352644,152.394298918996,359.488155447774,401.280447625325,553.905479338016,485.98759323086,634.895674114191,0.739012760666419,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,1.26108115284953,0.44292937929755,0.318909537314974,0.983179888294428,1.38147985492716,0.433947175744535,0,0,0,0.275936746304732,5.61927064957272,3.5163505977661,0,0.252470927204373,2.52406575533005,1.56175497718655,4.09304455692318,0.955875191810208,0.668396022247182,1.69845918473299,0.404810701674894,0,0,6.74774764485795,1.27746076687442,3.5613120733451,2.93196526836437,1.15479086080775,1.32745138339963,4.12727081463468,13.302236506449,34.1375194358176,21.2617362874156,17.5238034328039,25.8428293168221,21.0849563096953,27.0938007572388,6.32073515871632,2.10837217149998,4.12542172992747,0,5.58189391497062,10.4780533864031,3.21505552547388,3.72414490648775,1.42695054081656,1.48094118541909,1.2178597964584,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,63.8343032219373,6.30446026835733,0.170870880797853,2.88941615148511,0.555583582109135,0.565105371014073,0,0.228778173206523,0.169978429993855,0,0,11.4560474161814,3.32152793260192,13.6224042974989,21.8170788460039,15.0543573130417,22.9280691933486,20.3645163041079,49.5920734352016,4.18809507174447,2.59229946583586,0,0,4.18646328923141,1.48912641411388,0.972255941720238,1.29159823477731,1.85851738039856,5.04636126176742,11.0673727117358,2.9360616439199,0.241584120826006,0,0.632022241256357,0.405450430580328,0.308132871494482,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0,0.384847366561318,0,0.226730383615211,0,0,0,0,0.187682475451182,0.549454872801795,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0,0,0,0,0,0,2.90604573235695,3.19219898720825,4.26834014385335,11.9122291363464,15.3017608718427,16.9136027774013,21.3356858689551,19.7793654949338,14.7622836412235,14.9091354940641,17.4900716924265,15.0901073108861,13.2034525532534,14.533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|short_description=p1@Pipox
}}

Revision as of 21:00, 12 September 2013

Short description:p1@Pipox
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pipox_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 33bp_to_NM_008952, uc007khm.2_5end
EntrezGene:Pipox
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pipox

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A350.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.34
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I115.94
GP2+ M cell, pool3.CNhs13240.11847-124I218.75
Ileum epithelium, pool1.CNhs13199.10252-104B917.10
Ileum epithelium, pool2.CNhs13232.10253-104C126.72
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F635.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F910.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7332.98
Mouse hepatocyte, donor1.CNhs13078.11714-123C4327.07
Mouse hepatocyte, donor3.CNhs12615.11637-122C8530.53
Mouse hepatocyte, donor6.CNhs13090.11822-124F4476.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F6422.94
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7190.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6291.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H740.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C96.12
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C67.55
eyeball, neonate N01.CNhs11140.1532-43E717.04
eyeball, neonate N02.CNhs11205.1551-44G811.99
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I357.16
intestine, adult.CNhs10496.178-9A318.78
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D819.97
intestine, embryo E16.CNhs10585.463-22H473.61
intestine, embryo E17.CNhs10582.482-18D383.61
intestine, embryo E18.CNhs10526.1289-20F797.02
intestine, neonate N00.CNhs11126.644-26D140.81
intestine, neonate N01.CNhs11192.1322-23E996.35
intestine, neonate N06.CNhs11102.688-20B892.49
intestine, neonate N07.CNhs11095.720-20F2117.98
intestine, neonate N10.CNhs11098.755-23A598.26
intestine, neonate N20.CNhs11187.827-18D143.14
intestine, neonate N25.CNhs11121.1352-25E333.29
intestine, neonate N30.CNhs11131.1384-42G138.43
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F86.06
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G720.34
kidney, neonate N10.CNhs11206.758-6D5110.22
kidney, neonate N20.CNhs11113.832-19I1244.74
kidney, neonate N25.CNhs11122.1353-25F3255.12
kidney, neonate N30.CNhs11203.1385-42H1311.08
liver, adult pregnant day01.CNhs10466.508-5B2674.43
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E126.31
liver, embryo E15.CNhs10520.433-16D742.19
liver, embryo E16.CNhs10523.462-17F581.04
liver, embryo E17.CNhs10510.481-18A3127.82
liver, embryo E18.CNhs10579.499-43G4115.94
liver, neonate N00.CNhs11117.641-24F486.09
liver, neonate N03.CNhs11123.1345-25G2215.53
liver, neonate N06.CNhs11101.684-20A8152.39
liver, neonate N07.CNhs11103.716-20H2359.49
liver, neonate N10.CNhs11115.751-24B9401.28
liver, neonate N20.CNhs11220.823-25A3553.91
liver, neonate N25.CNhs11198.1368-26H1485.99
liver, neonate N30.CNhs11106.1382-42D1634.90
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E534.14
pancreas, embryo E17.CNhs10599.1558-45G321.26
pancreas, embryo E18.CNhs10580.1535-43I717.52
pancreas, neonate N00.CNhs11105.645-26G925.84
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D827.09
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C710.48
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I163.83
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D421.82
stomach, embryo E17.CNhs11006.1035-18D515.05
stomach, embryo E18.CNhs10999.1286-20C622.93
stomach, neonate N03.CNhs11193.1340-24B820.36
stomach, neonate N07.CNhs11210.718-18A949.59
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I411.07
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F216.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C218.26
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.94e-1422
epithelial sac1.94e-1422
digestive gland1.94e-1422
epithelium of foregut-midgut junction1.94e-1422
anatomical boundary1.94e-1422
hepatobiliary system1.94e-1422
foregut-midgut junction1.94e-1422
hepatic diverticulum1.94e-1422
liver primordium1.94e-1422
septum transversum1.94e-1422
liver bud1.94e-1422
digestive tract diverticulum4.39e-1423
sac4.39e-1423
intestine2.49e-1231
abdomen element1.17e-1149
abdominal segment element1.17e-1149
abdominal segment of trunk1.17e-1149
abdomen1.17e-1149
exocrine gland4.95e-1125
exocrine system4.95e-1125
gastrointestinal system2.11e-1047







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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