FFCP PHASE1:Mm9::chr11:78313973..78313987,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22370|HGNC=|MCL_coexpression_id=111|UniProt=|association_with_transcript=-120bp_to_ENSMUST00000153628_5end|description=CAGE_peak_4_at_Vtn_5end|id=chr11:78313973..78313987,+|ontology_enrichment_celltype=CL:0000181!5.53e-07!5;CL:0000417!5.53e-07!5;CL:0000668!5.53e-07!5;CL:0000412!5.53e-07!5;CL:0000182!5.53e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-19,5;CL:0000057,3.67e-07,1;CL:0000632,3.67e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.26e-28!22;UBERON:0007499!1.26e-28!22;UBERON:0006925!1.26e-28!22;UBERON:0009497!1.26e-28!22;UBERON:0000015!1.26e-28!22;UBERON:0002423!1.26e-28!22;UBERON:0006235!1.26e-28!22;UBERON:0008835!1.26e-28!22;UBERON:0003894!1.26e-28!22;UBERON:0004161!1.26e-28!22;UBERON:0008836!1.26e-28!22;UBERON:0009854!3.95e-27!23;UBERON:0009856!3.95e-27!23;UBERON:0002365!1.68e-24!25;UBERON:0002330!1.68e-24!25;UBERON:0005256!8.29e-13!47;UBERON:0005172!4.77e-12!49;UBERON:0005173!4.77e-12!49;UBERON:0002417!4.77e-12!49;UBERON:0000916!4.77e-12!49;UBERON:0003914!1.29e-11!47;UBERON:0000949!4.84e-10!72;UBERON:0002368!6.82e-10!60;UBERON:0005057!3.06e-09!51;UBERON:0002530!1.10e-08!65;UBERON:0000466!1.69e-08!79;UBERON:0009569!2.39e-08!66;UBERON:0005177!2.92e-08!85;UBERON:0003929!3.35e-08!55|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.06e-51,22;UBERON:0007499,6.06e-51,22;UBERON:0006925,6.06e-51,22;UBERON:0009497,6.06e-51,22;UBERON:0000015,6.06e-51,22;UBERON:0002423,6.06e-51,22;UBERON:0006235,6.06e-51,22;UBERON:0008835,6.06e-51,22;UBERON:0003894,6.06e-51,22;UBERON:0004161,6.06e-51,22;UBERON:0008836,6.06e-51,22;UBERON:0009854,1.13e-48,23;UBERON:0009856,1.13e-48,23;UBERON:0002365,1.13e-44,25;UBERON:0002330,1.13e-44,25;UBERON:0005256,3.39e-24,45;UBERON:0003914,4.19e-23,47;UBERON:0005172,4.23e-22,49;UBERON:0005173,4.23e-22,49;UBERON:0002417,4.23e-22,49;UBERON:0000916,4.23e-22,49;UBERON:0003929,1.59e-19,55;UBERON:0002368,9.07e-18,60;UBERON:0003104,1.88e-17,61;UBERON:0009142,1.88e-17,61;UBERON:0002530,2.78e-16,65;UBERON:0000490,5.19e-16,66;UBERON:0009569,5.19e-16,66;UBERON:0005911,3.02e-15,69;UBERON:0000949,1.52e-14,72;UBERON:0005177,4.12e-13,79;UBERON:0001041,6.30e-13,80;UBERON:0002100,2.63e-11,90;UBERON:0000025,1.46e-08,114;UBERON:0004921,1.46e-08,114;UBERON:0001007,2.20e-08,116;UBERON:0001555,2.20e-08,116;UBERON:0007026,2.20e-08,116;UBERON:0004119,3.27e-08,118;UBERON:0000925,3.27e-08,118;UBERON:0006595,3.27e-08,118;UBERON:0004111,6.96e-08,122;UBERON:0001048,5.15e-07,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.763991238884051,0,0,0,0,0,0,2.58127163094416,10.1995700056163,7.55584468292944,6.49776417447669,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0.393117990226406,0,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,15.7271169971784,2.19649130550465,8.62609239164127,3.72140947668503,1.5601883655728,1.26289438973556,0.896987067609561,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Vtn}} | ||
|EntrezGene=22370 | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt= | |||
|association_with_transcript=-120bp_to_ENSMUST00000153628_5end | |||
|description=CAGE_peak_4_at_Vtn_5end | |||
|id=chr11:78313973..78313987,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.53e-07!5;CL:0000417!5.53e-07!5;CL:0000668!5.53e-07!5;CL:0000412!5.53e-07!5;CL:0000182!5.53e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-19,5;CL:0000057,3.67e-07,1;CL:0000632,3.67e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.26e-28!22;UBERON:0007499!1.26e-28!22;UBERON:0006925!1.26e-28!22;UBERON:0009497!1.26e-28!22;UBERON:0000015!1.26e-28!22;UBERON:0002423!1.26e-28!22;UBERON:0006235!1.26e-28!22;UBERON:0008835!1.26e-28!22;UBERON:0003894!1.26e-28!22;UBERON:0004161!1.26e-28!22;UBERON:0008836!1.26e-28!22;UBERON:0009854!3.95e-27!23;UBERON:0009856!3.95e-27!23;UBERON:0002365!1.68e-24!25;UBERON:0002330!1.68e-24!25;UBERON:0005256!8.29e-13!47;UBERON:0005172!4.77e-12!49;UBERON:0005173!4.77e-12!49;UBERON:0002417!4.77e-12!49;UBERON:0000916!4.77e-12!49;UBERON:0003914!1.29e-11!47;UBERON:0000949!4.84e-10!72;UBERON:0002368!6.82e-10!60;UBERON:0005057!3.06e-09!51;UBERON:0002530!1.10e-08!65;UBERON:0000466!1.69e-08!79;UBERON:0009569!2.39e-08!66;UBERON:0005177!2.92e-08!85;UBERON:0003929!3.35e-08!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.06e-51,22;UBERON:0007499,6.06e-51,22;UBERON:0006925,6.06e-51,22;UBERON:0009497,6.06e-51,22;UBERON:0000015,6.06e-51,22;UBERON:0002423,6.06e-51,22;UBERON:0006235,6.06e-51,22;UBERON:0008835,6.06e-51,22;UBERON:0003894,6.06e-51,22;UBERON:0004161,6.06e-51,22;UBERON:0008836,6.06e-51,22;UBERON:0009854,1.13e-48,23;UBERON:0009856,1.13e-48,23;UBERON:0002365,1.13e-44,25;UBERON:0002330,1.13e-44,25;UBERON:0005256,3.39e-24,45;UBERON:0003914,4.19e-23,47;UBERON:0005172,4.23e-22,49;UBERON:0005173,4.23e-22,49;UBERON:0002417,4.23e-22,49;UBERON:0000916,4.23e-22,49;UBERON:0003929,1.59e-19,55;UBERON:0002368,9.07e-18,60;UBERON:0003104,1.88e-17,61;UBERON:0009142,1.88e-17,61;UBERON:0002530,2.78e-16,65;UBERON:0000490,5.19e-16,66;UBERON:0009569,5.19e-16,66;UBERON:0005911,3.02e-15,69;UBERON:0000949,1.52e-14,72;UBERON:0005177,4.12e-13,79;UBERON:0001041,6.30e-13,80;UBERON:0002100,2.63e-11,90;UBERON:0000025,1.46e-08,114;UBERON:0004921,1.46e-08,114;UBERON:0001007,2.20e-08,116;UBERON:0001555,2.20e-08,116;UBERON:0007026,2.20e-08,116;UBERON:0004119,3.27e-08,118;UBERON:0000925,3.27e-08,118;UBERON:0006595,3.27e-08,118;UBERON:0004111,6.96e-08,122;UBERON:0001048,5.15e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.763991238884051,0,0,0,0,0,0,2.58127163094416,10.1995700056163,7.55584468292944,6.49776417447669,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0.393117990226406,0,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,15.7271169971784,2.19649130550465,8.62609239164127,3.72140947668503,1.5601883655728,1.26289438973556,0.896987067609561,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Vtn | |||
}} |
Revision as of 21:04, 12 September 2013
Short description: | p4@Vtn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vtn_5end |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | -120bp_to_ENSMUST00000153628_5end |
EntrezGene: | Vtn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.01e-19 | 5 |
fibroblast | 3.67e-07 | 1 |
hepatic stellate cell | 3.67e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.