FFCP PHASE1:Mm9::chr11:79332855..79332864,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=5|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:79332855..79332864,-|id=chr11:79332855..79332864,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,5.16e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.49e-14,3;DOID:4045,5.49e-14,3;DOID:0050686,3.07e-07,6|ontology_enrichment_uberon=UBERON:0005057!3.04e-10!51;UBERON:0002405!8.30e-10!70;UBERON:0004119!6.50e-08!130;UBERON:0000925!6.50e-08!130;UBERON:0006595!6.50e-08!130;UBERON:0001007!1.53e-07!128;UBERON:0001555!1.53e-07!128;UBERON:0007026!1.53e-07!128;UBERON:0004921!3.03e-07!126;UBERON:0004185!3.03e-07!126;UBERON:0001041!3.46e-07!92;UBERON:0000077!4.68e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.85e-09,29;UBERON:0005057,6.85e-09,29;UBERON:0002390,1.76e-08,45;UBERON:0003061,1.76e-08,45;UBERON:0002193,7.44e-08,48;UBERON:0002405,7.44e-08,48;UBERON:0002106,1.60e-07,6;UBERON:0004457,1.60e-07,6;UBERON:0000042,1.60e-07,6;UBERON:0004854,1.60e-07,6;UBERON:0009034,1.60e-07,6;UBERON:0002095,1.60e-07,6;UBERON:0004782,1.60e-07,6;UBERON:0003281,1.60e-07,6;UBERON:0009664,1.60e-07,6;UBERON:0002296,1.60e-07,6;UBERON:0005602,1.60e-07,6;UBERON:0001179,1.60e-07,6;UBERON:0006293,1.60e-07,6;UBERON:0000077,3.45e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.0874204024189974,0,0,0,0,0.959801035240171,0.42438965179803,0,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,2.3440060335714,1.0470474879476,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,2.59416362840057,1.09824565275233,44.5681440234799,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,1.50791283939272,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0,3.57900068308913,2.7338845544205,0,0.509935289981566,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0.948033361884535,0,0,0,0,0,1.9231271923195,1.18151621739662,1.9183625490148,1.5241361331,0,2.33898913775406,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0.220591419119515,0|short_description=p@chr11:79332855..79332864,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:79332855..79332864,- | |||
|id=chr11:79332855..79332864,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,5.16e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.49e-14,3;DOID:4045,5.49e-14,3;DOID:0050686,3.07e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005057!3.04e-10!51;UBERON:0002405!8.30e-10!70;UBERON:0004119!6.50e-08!130;UBERON:0000925!6.50e-08!130;UBERON:0006595!6.50e-08!130;UBERON:0001007!1.53e-07!128;UBERON:0001555!1.53e-07!128;UBERON:0007026!1.53e-07!128;UBERON:0004921!3.03e-07!126;UBERON:0004185!3.03e-07!126;UBERON:0001041!3.46e-07!92;UBERON:0000077!4.68e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.85e-09,29;UBERON:0005057,6.85e-09,29;UBERON:0002390,1.76e-08,45;UBERON:0003061,1.76e-08,45;UBERON:0002193,7.44e-08,48;UBERON:0002405,7.44e-08,48;UBERON:0002106,1.60e-07,6;UBERON:0004457,1.60e-07,6;UBERON:0000042,1.60e-07,6;UBERON:0004854,1.60e-07,6;UBERON:0009034,1.60e-07,6;UBERON:0002095,1.60e-07,6;UBERON:0004782,1.60e-07,6;UBERON:0003281,1.60e-07,6;UBERON:0009664,1.60e-07,6;UBERON:0002296,1.60e-07,6;UBERON:0005602,1.60e-07,6;UBERON:0001179,1.60e-07,6;UBERON:0006293,1.60e-07,6;UBERON:0000077,3.45e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.0874204024189974,0,0,0,0,0.959801035240171,0.42438965179803,0,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,2.3440060335714,1.0470474879476,1.76469446409304,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,2.59416362840057,1.09824565275233,44.5681440234799,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,1.50791283939272,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0.238744688006273,0.164140899745061,0.291480836629851,0,1.53783792718067,0,0,3.57900068308913,2.7338845544205,0,0.509935289981566,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0,0,0.948033361884535,0,0,0,0,0,1.9231271923195,1.18151621739662,1.9183625490148,1.5241361331,0,2.33898913775406,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p@chr11:79332855..79332864,- | |||
}} |
Revision as of 21:06, 12 September 2013
Short description: | p@chr11:79332855..79332864, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:79332855..79332864, - |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 5.16e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.85e-09 | 29 |
immune organ | 6.85e-09 | 29 |
hematopoietic system | 1.76e-08 | 45 |
blood island | 1.76e-08 | 45 |
hemolymphoid system | 7.44e-08 | 48 |
immune system | 7.44e-08 | 48 |
spleen | 1.60e-07 | 6 |
cavity lining | 1.60e-07 | 6 |
serous membrane | 1.60e-07 | 6 |
gastrointestinal system mesentery | 1.60e-07 | 6 |
stomach region | 1.60e-07 | 6 |
mesentery | 1.60e-07 | 6 |
gastrointestinal system serosa | 1.60e-07 | 6 |
mesentery of stomach | 1.60e-07 | 6 |
gut mesentery | 1.60e-07 | 6 |
dorsal mesentery | 1.60e-07 | 6 |
dorsal mesogastrium | 1.60e-07 | 6 |
peritoneal cavity | 1.60e-07 | 6 |
spleen primordium | 1.60e-07 | 6 |
mixed endoderm/mesoderm-derived structure | 3.45e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.49e-14 | 3 |
muscle cancer | 5.49e-14 | 3 |
organ system cancer | 3.07e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.