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FFCP PHASE1:Mm9::chr11:83517555..83517592,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=100034251|HGNC=|MCL_coexpression_id=38|UniProt=Q5SSJ1|association_with_transcript=0bp_to_NM_001081957,uc007kpq.1_5end|description=CAGE_peak_1_at_Gm11428_5end|id=chr11:83517555..83517592,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.36e-11!32;UBERON:0002405!2.03e-09!70;UBERON:0005256!4.70e-09!47;UBERON:0000926!8.43e-09!193;UBERON:0004120!8.43e-09!193;UBERON:0006603!8.43e-09!193;UBERON:0002371!1.21e-08!16;UBERON:0002365!1.20e-07!25;UBERON:0002330!1.20e-07!25;UBERON:0001474!1.61e-07!22;UBERON:0004765!1.61e-07!22;UBERON:0001434!1.61e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.07e-12,32;UBERON:0005256,5.06e-11,45;UBERON:0002371,2.50e-09,16;UBERON:0002365,3.10e-08,25;UBERON:0002330,3.10e-08,25;UBERON:0001474,3.20e-08,22;UBERON:0004765,3.20e-08,22;UBERON:0001434,3.20e-08,22;UBERON:0002100,8.59e-08,90;UBERON:0003104,1.94e-07,61;UBERON:0009142,1.94e-07,61;UBERON:0009854,4.21e-07,23;UBERON:0009856,4.21e-07,23;UBERON:0002107,7.65e-07,22;UBERON:0007499,7.65e-07,22;UBERON:0006925,7.65e-07,22;UBERON:0009497,7.65e-07,22;UBERON:0000015,7.65e-07,22;UBERON:0002423,7.65e-07,22;UBERON:0006235,7.65e-07,22;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22;UBERON:0004161,7.65e-07,22;UBERON:0008836,7.65e-07,22|phase1_expression=0.320297694209588,10.4692622291808,15.9249733786338,0.30246421130683,0,6.21153306073992,6.54115393667472,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,20.6528052325711,30.7762406432535,47.570207712714,14.1957974411207,16.5908464662944,23.7658205006897,7.65389611359628,27.0071387266408,24.0303806007821,2.3998863419011,3.67054849707472,12.0588712464154,25.8457197695445,23.0554218973901,0.380046838912748,1.26015064879965,78.9360617932885,0,0,0,0.288851619751275,0,0,341.10327905058,558.654771334517,238.203303508078,258.821854733646,267.753830103711,129.631264259318,16.6183799727762,15.8148012702443,3.48738829107195,14.0830441982647,0,0.219686182734472,1.55543919259427,3.3596741190087,0,9.56360854529097,0,0.672187598284928,9.26133969729409,28.0802771139982,36.097046459421,0.202316460859598,0,0,0,0,1313.4036373722,1204.43922960657,863.233339659512,434.120560141168,140.239681442367,0,0,0,0.856952953211411,1.98781686856452,0,0,0,0,0.638436690425939,0.307213066512487,0,0,0,1.3959149950069,1.12552522006336,1.37518422999129,0,0.427115042397309,0,0.530083353332288,1.20914496170857,7.53647670624362,110.134256253617,2.719885334831,1.61910957491345,20.7928453583254,4.48026887097336,11.9377757111989,0,0,0,0,1.28326477414318,0,0,0,0,0,18.1552368753305,51.7875767294343,22.5632051378534,0.173485326766136,0,2.30615497256059,0.60289056221049,1.29347577849275,5.27799683584637,1.97755974187499,27.0400797440235,30.9613693182456,2.75003644910596,5.30019644304944,9.21262980956922,9.31958806090611,0.585561594023094,0.209446706813455,5.10914110417183,45.050486814226,23.9961092397363,25.6681858687591,1.3481157546434,1.37250180845588,0.125654352112864,1.21677024134594,0.255715457330331,0.62336413367868,0.486723789203273,1.73126918545538,17.9146037678534,7.83440551144392,7.15502310014011,0.130120442962704,0,0.540186389416048,0.452114453507145,0.136072998302656,0.768682321709099,0.468508622798644,2.84573707812917,0,0,0.175951124163949,0,0.278047249225598,0,0.823128545631774,0,6.31991868581911,3.86021860672073,4.83077948972507,0,0.234526059981096,0,0.23674473558521,0.787056926989615,1.07986979021165,0.465067889500816,0.804820204198858,1.63471479314037,0.493679549740441,3.2833492815819,5.18840381093477,9.21059920779594,29.8588156795829,18.1178665326502,1.05144974282064,0.102904612379284,0.660837565967596,2.64450566663544,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.760902504450237,3.32170343081158,1.81168850196412,3.2673577144035,3.18330355265841,3.8992817423824,0.898819408654221,3.02593269824572,4.97853183135918,0,0.456994050438915,0,0,0.387904974335251,0.420814919341911,0.822074982615345,1.18088118383682,3.61097074035162,1.72756029490521,75.2989672801358,1.33476084572875,2.35870794135844,2.69834534861824,5.07150303471257,5.54707467430559,7.89340140522401,7.48009957372108,18.6455510791291,7.96228098245436,12.9391385874619,19.7234702264307,55.5427058143918,35.1084640346485,29.2417784040717,27.9817242390753,28.4519912856571,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.714130922658041,2.92700471786698,5.99013547603526,3.32197034473162,2.39182152986231,12.7813385478276,20.3768278601757,15.7667473853848,337.77247602397,487.883398385382,69.3387624956841,48.2889306033282,0.80275294993896,0.703270119553219,0,9.59389523376617,0,0,0,0,0,0,0,0,0,0.321321316421807,13.9101283504103,0.712262414669021,0.977321756121456,18.1467135269789,9.2921596837974,0.242780636154981,0.302323556964751,0.565815239267694,1.18120757152309,1.84461088766356,3.35956781118687,3.27180356529755,6.77345018930971,14.5376908650475,27.4088382294997,47.442349894166,3.74483566329167,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,1.07021290561242,1.64549020602121,1.522324745573,3.28540391289194,1.48282449604674,9.92377791247329,23.2489616647487,4.68246837418126,2.35220407219808,12.7728408083356,15.1009627765456,4.66369338607761,0.927126510052548,71.7657699350981,17.1301100409475,10.0005044779644,2.82552685507037,3.96413260390973,7.32090154260872,111.165893215981,124.556792568056,80.0177848327614,4.77335309007557,0,1.82987520414164,0.216010681643603,0.209088296014469,1.31017538247707,0.674321731924103,3.47144514046411,8.37619014348895,6.35113369129785,9.94142900939081,2.81846469342095,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0.469428954583016,2.0832701575032,0.524296722128554,3.8653459332161,6.91272015018877,14.5365115488962,0,0.924398614483445,2.46849563657811,0.716106782669926,1.19208812868759,2.28371354087941,2.21534290761866,4.03865799792591,1.143102099825,2.52065462842101,6.1398464866044,7.60073548958603,6.778860326531,14.964205318604,0,0,0,13.5232715822533,42.2285569765159,10.8059458317686,14.5770497773765,10.5330141847426,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,3.16038732188782,2.30574478890781,0.919217542250071,1.11123363900808,0.618105171716683,1.28367683836726,1.26348605881899,1.2673964994512,0.565879024158229,1.21733959710847,1.02440243847791,0.574354689556133,1.42888107384922,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,1.0174249164263,1.03520318456864,1.01537529470012,0.73171189149109,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,0.394017929502254,0,0.619747364743864,1.35034627686799,0.499621155875892,1.87145286756327,3.43793686477277,3.63447830930802,13.0148937280514,7.88350641109433|short_description=p1@Gm11428}}
|EntrezGene=100034251
|HGNC=
|MCL_coexpression_id=38
|UniProt=Q5SSJ1
|association_with_transcript=0bp_to_NM_001081957,uc007kpq.1_5end
|description=CAGE_peak_1_at_Gm11428_5end
|id=chr11:83517555..83517592,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!1.36e-11!32;UBERON:0002405!2.03e-09!70;UBERON:0005256!4.70e-09!47;UBERON:0000926!8.43e-09!193;UBERON:0004120!8.43e-09!193;UBERON:0006603!8.43e-09!193;UBERON:0002371!1.21e-08!16;UBERON:0002365!1.20e-07!25;UBERON:0002330!1.20e-07!25;UBERON:0001474!1.61e-07!22;UBERON:0004765!1.61e-07!22;UBERON:0001434!1.61e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.07e-12,32;UBERON:0005256,5.06e-11,45;UBERON:0002371,2.50e-09,16;UBERON:0002365,3.10e-08,25;UBERON:0002330,3.10e-08,25;UBERON:0001474,3.20e-08,22;UBERON:0004765,3.20e-08,22;UBERON:0001434,3.20e-08,22;UBERON:0002100,8.59e-08,90;UBERON:0003104,1.94e-07,61;UBERON:0009142,1.94e-07,61;UBERON:0009854,4.21e-07,23;UBERON:0009856,4.21e-07,23;UBERON:0002107,7.65e-07,22;UBERON:0007499,7.65e-07,22;UBERON:0006925,7.65e-07,22;UBERON:0009497,7.65e-07,22;UBERON:0000015,7.65e-07,22;UBERON:0002423,7.65e-07,22;UBERON:0006235,7.65e-07,22;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22;UBERON:0004161,7.65e-07,22;UBERON:0008836,7.65e-07,22
|phase1_expression=0.320297694209588,10.4692622291808,15.9249733786338,0.30246421130683,0,6.21153306073992,6.54115393667472,0.129123323441576,0.140788722151667,0,0,0,0.342401459862411,0,20.6528052325711,30.7762406432535,47.570207712714,14.1957974411207,16.5908464662944,23.7658205006897,7.65389611359628,27.0071387266408,24.0303806007821,2.3998863419011,3.67054849707472,12.0588712464154,25.8457197695445,23.0554218973901,0.380046838912748,1.26015064879965,78.9360617932885,0,0,0,0.288851619751275,0,0,341.10327905058,558.654771334517,238.203303508078,258.821854733646,267.753830103711,129.631264259318,16.6183799727762,15.8148012702443,3.48738829107195,14.0830441982647,0,0.219686182734472,1.55543919259427,3.3596741190087,0,9.56360854529097,0,0.672187598284928,9.26133969729409,28.0802771139982,36.097046459421,0.202316460859598,0,0,0,0,1313.4036373722,1204.43922960657,863.233339659512,434.120560141168,140.239681442367,0,0,0,0.856952953211411,1.98781686856452,0,0,0,0,0.638436690425939,0.307213066512487,0,0,0,1.3959149950069,1.12552522006336,1.37518422999129,0,0.427115042397309,0,0.530083353332288,1.20914496170857,7.53647670624362,110.134256253617,2.719885334831,1.61910957491345,20.7928453583254,4.48026887097336,11.9377757111989,0,0,0,0,1.28326477414318,0,0,0,0,0,18.1552368753305,51.7875767294343,22.5632051378534,0.173485326766136,0,2.30615497256059,0.60289056221049,1.29347577849275,5.27799683584637,1.97755974187499,27.0400797440235,30.9613693182456,2.75003644910596,5.30019644304944,9.21262980956922,9.31958806090611,0.585561594023094,0.209446706813455,5.10914110417183,45.050486814226,23.9961092397363,25.6681858687591,1.3481157546434,1.37250180845588,0.125654352112864,1.21677024134594,0.255715457330331,0.62336413367868,0.486723789203273,1.73126918545538,17.9146037678534,7.83440551144392,7.15502310014011,0.130120442962704,0,0.540186389416048,0.452114453507145,0.136072998302656,0.768682321709099,0.468508622798644,2.84573707812917,0,0,0.175951124163949,0,0.278047249225598,0,0.823128545631774,0,6.31991868581911,3.86021860672073,4.83077948972507,0,0.234526059981096,0,0.23674473558521,0.787056926989615,1.07986979021165,0.465067889500816,0.804820204198858,1.63471479314037,0.493679549740441,3.2833492815819,5.18840381093477,9.21059920779594,29.8588156795829,18.1178665326502,1.05144974282064,0.102904612379284,0.660837565967596,2.64450566663544,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.760902504450237,3.32170343081158,1.81168850196412,3.2673577144035,3.18330355265841,3.8992817423824,0.898819408654221,3.02593269824572,4.97853183135918,0,0.456994050438915,0,0,0.387904974335251,0.420814919341911,0.822074982615345,1.18088118383682,3.61097074035162,1.72756029490521,75.2989672801358,1.33476084572875,2.35870794135844,2.69834534861824,5.07150303471257,5.54707467430559,7.89340140522401,7.48009957372108,18.6455510791291,7.96228098245436,12.9391385874619,19.7234702264307,55.5427058143918,35.1084640346485,29.2417784040717,27.9817242390753,28.4519912856571,0,0.162964976442026,0.339490171550376,0.234690248288502,0,0.714130922658041,2.92700471786698,5.99013547603526,3.32197034473162,2.39182152986231,12.7813385478276,20.3768278601757,15.7667473853848,337.77247602397,487.883398385382,69.3387624956841,48.2889306033282,0.80275294993896,0.703270119553219,0,9.59389523376617,0,0,0,0,0,0,0,0,0,0.321321316421807,13.9101283504103,0.712262414669021,0.977321756121456,18.1467135269789,9.2921596837974,0.242780636154981,0.302323556964751,0.565815239267694,1.18120757152309,1.84461088766356,3.35956781118687,3.27180356529755,6.77345018930971,14.5376908650475,27.4088382294997,47.442349894166,3.74483566329167,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,1.07021290561242,1.64549020602121,1.522324745573,3.28540391289194,1.48282449604674,9.92377791247329,23.2489616647487,4.68246837418126,2.35220407219808,12.7728408083356,15.1009627765456,4.66369338607761,0.927126510052548,71.7657699350981,17.1301100409475,10.0005044779644,2.82552685507037,3.96413260390973,7.32090154260872,111.165893215981,124.556792568056,80.0177848327614,4.77335309007557,0,1.82987520414164,0.216010681643603,0.209088296014469,1.31017538247707,0.674321731924103,3.47144514046411,8.37619014348895,6.35113369129785,9.94142900939081,2.81846469342095,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0.469428954583016,2.0832701575032,0.524296722128554,3.8653459332161,6.91272015018877,14.5365115488962,0,0.924398614483445,2.46849563657811,0.716106782669926,1.19208812868759,2.28371354087941,2.21534290761866,4.03865799792591,1.143102099825,2.52065462842101,6.1398464866044,7.60073548958603,6.778860326531,14.964205318604,0,0,0,13.5232715822533,42.2285569765159,10.8059458317686,14.5770497773765,10.5330141847426,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,3.16038732188782,2.30574478890781,0.919217542250071,1.11123363900808,0.618105171716683,1.28367683836726,1.26348605881899,1.2673964994512,0.565879024158229,1.21733959710847,1.02440243847791,0.574354689556133,1.42888107384922,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,1.0174249164263,1.03520318456864,1.01537529470012,0.73171189149109,0.789209134313529,0.407412341537585,1.12228454331548,0.355905054372522,0.394017929502254,0,0.619747364743864,1.35034627686799,0.499621155875892,1.87145286756327,3.43793686477277,3.63447830930802,13.0148937280514,7.88350641109433
|short_description=p1@Gm11428
}}

Revision as of 21:12, 12 September 2013

Short description:p1@Gm11428
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm11428_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 0bp_to_NM_001081957, uc007kpq.1_5end
EntrezGene:Gm11428
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm11428

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.78
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A547.57
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.59
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I125.85
GP2+ M cell, pool3.CNhs13240.11847-124I223.06
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C878.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8341.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1558.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3238.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9258.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2267.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4129.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.08
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C536.10
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71313.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71204.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2863.23
Mouse Microglia, donor1.CNhs12629.11718-123C8434.12
Mouse Microglia, donor2.CNhs12634.11736-123E8140.24
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7110.13
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.16
accessory axillary lymph node, adult.CNhs10475.1063-29H951.79
adrenal gland, adult.CNhs10508.49-24D722.56
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H127.04
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C745.05
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.67
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.91
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I69.21
heart, neonate N25.CNhs11196.1351-25D329.86
heart, neonate N30.CNhs11202.1390-42D218.12
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B275.30
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B955.54
liver, neonate N20.CNhs11220.823-25A335.11
liver, neonate N25.CNhs11198.1368-26H129.24
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B128.45
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1337.77
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1487.88
mammary gland, adult lactating day02.CNhs10480.595-22B669.34
mammary gland, adult pregnant day19.CNhs10476.588-5H248.29
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I713.91
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G618.15
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H547.44
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F89.92
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I512.77
skin, neonate N10.CNhs11108.762-6C415.10
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G271.77
spleen, embryo E16.CNhs11035.461-43C117.13
spleen, embryo E18.CNhs11011.1271-21F210.00
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6111.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9124.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D380.02
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G77.60
thymus, neonate N30.CNhs11132.1393-42G26.78
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E413.52
uterus, adult pregnant day19.CNhs10497.590-15F542.23
uterus, adult.CNhs10509.92-27E510.81
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
musculoskeletal system1.07e-1232
trunk mesenchyme5.06e-1145
bone marrow2.50e-0916
exocrine gland3.10e-0825
exocrine system3.10e-0825
bone element3.20e-0822
skeletal element3.20e-0822
skeletal system3.20e-0822
trunk8.59e-0890
mesenchyme1.94e-0761
entire embryonic mesenchyme1.94e-0761
digestive tract diverticulum4.21e-0723
sac4.21e-0723
liver7.65e-0722
epithelial sac7.65e-0722
digestive gland7.65e-0722
epithelium of foregut-midgut junction7.65e-0722
anatomical boundary7.65e-0722
hepatobiliary system7.65e-0722
foregut-midgut junction7.65e-0722
hepatic diverticulum7.65e-0722
liver primordium7.65e-0722
septum transversum7.65e-0722
liver bud7.65e-0722







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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