FFCP PHASE1:Mm9::chr11:84684214..84684309,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217039|HGNC=|MCL_coexpression_id=1091|UniProt=Q5SV77,E9Q6H9|association_with_transcript=0bp_to_ENSMUST00000100685,ENSMUST00000100686,ENSMUST00000108081,ENSMUST00000167429,ENSMUST00000170741,ENSMUST00000172405,NM_153144,uc007kqv.1,uc007kqx.1,uc011ybl.1_5end|description=CAGE_peak_1_at_Ggnbp2_5end|id=chr11:84684214..84684309,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!7.14e-08!24;UBERON:0000490!1.11e-07!66;UBERON:0003929!1.47e-07!55;UBERON:0005057!9.20e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.43e-09,118;UBERON:0000925,9.43e-09,118;UBERON:0006595,9.43e-09,118;UBERON:0001007,1.30e-08,116;UBERON:0001555,1.30e-08,116;UBERON:0007026,1.30e-08,116;UBERON:0004921,4.07e-08,114;UBERON:0004923,7.14e-08,24;UBERON:0000490,1.11e-07,66;UBERON:0000160,1.25e-07,31;UBERON:0003929,1.47e-07,55|phase1_expression=28.8267924788629,127.724999196006,133.769776380524,184.20070468586,195.850230409022,67.1517087647559,55.1325831805441,38.7369970324729,64.19965730116,66.7083900017681,34.0723756768755,28.7179772383211,37.4929598549341,38.1152954546829,53.9637814141374,69.0440661799307,93.0417297910435,36.2781490161973,36.4724393391265,32.2536135366503,85.1283334412208,18.3688259721638,20.373583552837,38.8781587387978,37.1643035328815,103.935985504819,82.2755412663833,67.0115533653115,48.4559719613753,64.5197132185423,43.680910599095,10.1604907753541,9.22597181376855,0,32.9290846516453,22.607911768755,32.4629276457167,58.1758966724302,43.7547792933328,52.3523743973798,62.9407692193185,58.7419117064263,67.4859390713303,27.697299954627,35.076418201952,26.4307323112821,10.1710874765245,4.36050312760893,3.51497892375155,7.38833616482277,5.87942970826523,4.31257693094915,39.428912423568,46.423177088726,43.6921938885203,30.0993540162058,30.0860111935695,23.2052441524849,10.9250888864183,10.0508286061686,16.4796164911607,4.06613438482959,3.55717918444456,7.19919773825119,3.9554654502679,5.6838409195688,5.09320187881288,5.76327457982332,14.2054768862614,9.72042755988173,12.4091727197315,14.2825492201902,14.3564551618549,17.7611658861683,11.4056110511701,10.1114066527102,27.5289702498472,33.1987079021488,33.0254046500923,12.6610836220986,10.7040543014819,19.7947080811569,18.9844439320939,22.5105044012672,25.5173073787273,31.2306300602088,25.9116459054367,20.6903384866084,23.2479413532875,23.1248973926764,31.5952292684829,36.9982267101996,27.8788246820178,25.3660500069774,27.9403859502498,29.5697745484241,30.3359947484584,21.8150812899914,21.0426663728324,21.2003744706204,27.1827800168993,34.6481489018658,135.046777044522,120.881339536066,14.2884087067401,15.7083116594561,13.6491600153991,40.4210934205472,39.0996204307229,20.4850151909458,21.3386951922347,19.1813251336649,17.9880087859726,19.5939432718409,25.2815720341765,22.1173200740229,41.7759495471092,33.8362495192593,38.9228642857945,29.4415666904285,34.4512768798214,32.9715172131951,18.6391761218122,40.4037499875935,36.0248335719143,43.1722423302519,31.2717474960452,16.7972764678154,28.7178713185126,32.953940669061,39.8025524452205,32.7957859014576,41.5440125259541,38.1016031422192,29.9214784165767,35.3685953487712,29.5334155165917,33.7142890353352,25.2722758433675,22.9381622916257,19.3879460014429,21.380895712313,20.5270827978098,25.6198190320716,27.7588916537418,29.0818145046609,23.8939397627309,24.0594134787285,12.0718076042392,23.6382600209774,23.5774506379691,24.3307262994608,24.190110682627,30.2979384874285,28.3979348242962,24.0831462850377,14.0442637462647,22.6466158260949,33.8154564280755,22.5767092063697,21.3418714582798,20.3470129450947,23.674473558521,23.4149435779411,27.9223474326155,29.5318109833018,29.7783475553577,36.7810828456584,31.4309313334748,30.0426459264744,32.022179770613,38.8891966551384,27.8828646419634,38.6514486029871,33.4361018216962,34.370140534681,75.9963200862735,39.9320355661952,20.2623838008472,22.759193842323,27.4487692616059,28.6390604965146,32.9119504890408,33.0992589435853,46.9783770929066,40.3512439073827,50.5183769688542,49.5401615382466,46.4014527343506,49.4350674759822,47.5503709724327,47.9930468543025,11.569741958138,21.9357144210679,28.1769339182701,24.8454619971283,23.6622034344503,32.9638353484497,28.8990974657856,32.6218427034921,29.0447646506543,26.6537874071089,21.6410417773619,29.0310483946004,33.8081471594709,35.303351644422,48.4835690118522,42.9295344359302,41.7586396921528,32.2219673944908,53.1803543822116,34.8692994748863,58.9449646762154,45.7733365632259,38.380633793091,36.8765161802783,36.776469771992,37.1481511449793,31.9623018988226,23.4969350595401,24.2817814898619,24.6130374374023,23.9384053254272,27.4710262204578,31.4217605969538,32.7824528401102,33.2610154064063,29.2333390336383,32.0504085001549,29.9869865929801,30.5652417902635,32.1120910050956,27.142431109069,21.7562273527484,27.538799289066,20.4193192265502,28.7385556078148,29.7717683944196,26.7213960963981,26.7619182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| ||
|EntrezGene=217039 | |||
|HGNC= | |||
|MCL_coexpression_id=1091 | |||
|UniProt=Q5SV77,E9Q6H9 | |||
|association_with_transcript=0bp_to_ENSMUST00000100685,ENSMUST00000100686,ENSMUST00000108081,ENSMUST00000167429,ENSMUST00000170741,ENSMUST00000172405,NM_153144,uc007kqv.1,uc007kqx.1,uc011ybl.1_5end | |||
|description=CAGE_peak_1_at_Ggnbp2_5end | |||
|id=chr11:84684214..84684309,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!7.14e-08!24;UBERON:0000490!1.11e-07!66;UBERON:0003929!1.47e-07!55;UBERON:0005057!9.20e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.43e-09,118;UBERON:0000925,9.43e-09,118;UBERON:0006595,9.43e-09,118;UBERON:0001007,1.30e-08,116;UBERON:0001555,1.30e-08,116;UBERON:0007026,1.30e-08,116;UBERON:0004921,4.07e-08,114;UBERON:0004923,7.14e-08,24;UBERON:0000490,1.11e-07,66;UBERON:0000160,1.25e-07,31;UBERON:0003929,1.47e-07,55 | |||
|phase1_expression=28.8267924788629,127.724999196006,133.769776380524,184.20070468586,195.850230409022,67.1517087647559,55.1325831805441,38.7369970324729,64.19965730116,66.7083900017681,34.0723756768755,28.7179772383211,37.4929598549341,38.1152954546829,53.9637814141374,69.0440661799307,93.0417297910435,36.2781490161973,36.4724393391265,32.2536135366503,85.1283334412208,18.3688259721638,20.373583552837,38.8781587387978,37.1643035328815,103.935985504819,82.2755412663833,67.0115533653115,48.4559719613753,64.5197132185423,43.680910599095,10.1604907753541,9.22597181376855,0,32.9290846516453,22.607911768755,32.4629276457167,58.1758966724302,43.7547792933328,52.3523743973798,62.9407692193185,58.7419117064263,67.4859390713303,27.697299954627,35.076418201952,26.4307323112821,10.1710874765245,4.36050312760893,3.51497892375155,7.38833616482277,5.87942970826523,4.31257693094915,39.428912423568,46.423177088726,43.6921938885203,30.0993540162058,30.0860111935695,23.2052441524849,10.9250888864183,10.0508286061686,16.4796164911607,4.06613438482959,3.55717918444456,7.19919773825119,3.9554654502679,5.6838409195688,5.09320187881288,5.76327457982332,14.2054768862614,9.72042755988173,12.4091727197315,14.2825492201902,14.3564551618549,17.7611658861683,11.4056110511701,10.1114066527102,27.5289702498472,33.1987079021488,33.0254046500923,12.6610836220986,10.7040543014819,19.7947080811569,18.9844439320939,22.5105044012672,25.5173073787273,31.2306300602088,25.9116459054367,20.6903384866084,23.2479413532875,23.1248973926764,31.5952292684829,36.9982267101996,27.8788246820178,25.3660500069774,27.9403859502498,29.5697745484241,30.3359947484584,21.8150812899914,21.0426663728324,21.2003744706204,27.1827800168993,34.6481489018658,135.046777044522,120.881339536066,14.2884087067401,15.7083116594561,13.6491600153991,40.4210934205472,39.0996204307229,20.4850151909458,21.3386951922347,19.1813251336649,17.9880087859726,19.5939432718409,25.2815720341765,22.1173200740229,41.7759495471092,33.8362495192593,38.9228642857945,29.4415666904285,34.4512768798214,32.9715172131951,18.6391761218122,40.4037499875935,36.0248335719143,43.1722423302519,31.2717474960452,16.7972764678154,28.7178713185126,32.953940669061,39.8025524452205,32.7957859014576,41.5440125259541,38.1016031422192,29.9214784165767,35.3685953487712,29.5334155165917,33.7142890353352,25.2722758433675,22.9381622916257,19.3879460014429,21.380895712313,20.5270827978098,25.6198190320716,27.7588916537418,29.0818145046609,23.8939397627309,24.0594134787285,12.0718076042392,23.6382600209774,23.5774506379691,24.3307262994608,24.190110682627,30.2979384874285,28.3979348242962,24.0831462850377,14.0442637462647,22.6466158260949,33.8154564280755,22.5767092063697,21.3418714582798,20.3470129450947,23.674473558521,23.4149435779411,27.9223474326155,29.5318109833018,29.7783475553577,36.7810828456584,31.4309313334748,30.0426459264744,32.022179770613,38.8891966551384,27.8828646419634,38.6514486029871,33.4361018216962,34.370140534681,75.9963200862735,39.9320355661952,20.2623838008472,22.759193842323,27.4487692616059,28.6390604965146,32.9119504890408,33.0992589435853,46.9783770929066,40.3512439073827,50.5183769688542,49.5401615382466,46.4014527343506,49.4350674759822,47.5503709724327,47.9930468543025,11.569741958138,21.9357144210679,28.1769339182701,24.8454619971283,23.6622034344503,32.9638353484497,28.8990974657856,32.6218427034921,29.0447646506543,26.6537874071089,21.6410417773619,29.0310483946004,33.8081471594709,35.303351644422,48.4835690118522,42.9295344359302,41.7586396921528,32.2219673944908,53.1803543822116,34.8692994748863,58.9449646762154,45.7733365632259,38.380633793091,36.8765161802783,36.776469771992,37.1481511449793,31.9623018988226,23.4969350595401,24.2817814898619,24.6130374374023,23.9384053254272,27.4710262204578,31.4217605969538,32.7824528401102,33.2610154064063,29.2333390336383,32.0504085001549,29.9869865929801,30.5652417902635,32.1120910050956,27.142431109069,21.7562273527484,27.538799289066,20.4193192265502,28.7385556078148,29.7717683944196,26.7213960963981,26.7619182836635,26.1871822115493,17.9601822376454,18.7418356027535,20.790285421872,25.6218475194753,32.8368775715046,24.2886421004937,19.8733983379692,23.3219788988449,32.1321316421807,26.400855848738,18.6968883850618,34.3691484236045,28.5398312742486,23.8941249011933,15.0523994416088,14.511530734308,18.6719028958339,12.4026795009925,28.8989039067292,32.5619649391959,27.6285634402904,27.0938007572388,22.7546465713787,25.3004660579997,27.8465966770104,30.9800041235947,19.8067203434441,10.0899773350549,19.5046701878749,20.2167866352192,20.5124140242381,25.5050981933287,21.0080814889074,26.752574719263,40.4599255349897,21.6117830093863,38.0887244294819,32.7772786192688,31.72459851221,27.3362667767183,26.754966658445,51.0091464102239,30.0388989257026,38.4459481795169,25.1791978915131,32.779431344439,61.596485440534,59.598683286367,47.8146382001632,28.5563762389677,31.6290282251467,28.8837945251246,28.6401185404534,21.3526795667266,23.1784192524607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| |||
|short_description=p1@Ggnbp2 | |||
}} | |||
Revision as of 21:15, 12 September 2013
| Short description: | p1@Ggnbp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ggnbp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1091 |
| Association with transcript: | 0bp_to_ENSMUST00000100685, ENSMUST00000100686, ENSMUST00000108081, ENSMUST00000167429, ENSMUST00000170741, ENSMUST00000172405, NM_153144, uc007kqv.1, uc007kqx.1, uc011ybl.1_5end |
| EntrezGene: | Ggnbp2 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 9.43e-09 | 118 |
| endoderm | 9.43e-09 | 118 |
| presumptive endoderm | 9.43e-09 | 118 |
| digestive system | 1.30e-08 | 116 |
| digestive tract | 1.30e-08 | 116 |
| primitive gut | 1.30e-08 | 116 |
| subdivision of digestive tract | 4.07e-08 | 114 |
| organ component layer | 7.14e-08 | 24 |
| unilaminar epithelium | 1.11e-07 | 66 |
| intestine | 1.25e-07 | 31 |
| gut epithelium | 1.47e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
